Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_C06
         (853 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5DZN9 Cluster: Putative uncharacterized protein; n=1; ...    38   0.32 
UniRef50_Q26632 Cluster: SFE1; n=2; Echinacea|Rep: SFE1 - Strong...    35   2.3  
UniRef50_A2DFD4 Cluster: Putative uncharacterized protein; n=2; ...    35   3.0  
UniRef50_Q9FG73 Cluster: Nucleolar protein-like; n=10; Magnoliop...    33   9.1  
UniRef50_A4YHT7 Cluster: Methyltransferase FkbM family; n=1; Met...    33   9.1  

>UniRef50_A5DZN9 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 396

 Score = 37.9 bits (84), Expect = 0.32
 Identities = 25/104 (24%), Positives = 48/104 (46%)
 Frame = +2

Query: 398 SQDGEESYQLLANDCEGEGSENAVTCVLQTSDTEDRDNQEYVMVDSDNGQGPLFFLQSAL 577
           +Q  E +  +  N+   +  +NA+    +    +DR +      DSD+    L F Q  +
Sbjct: 231 AQAQESNVMIFRNESSLDDLDNAI----EDGVEDDRMSVSSYESDSDSSSICLQFDQDFI 286

Query: 578 PQVNSQQKKDETQVVHVTQKKVPSATEILEKAKALQKVKATIAQ 709
           P +++  +KD T     T   V S  E+   A+A +++K+ + Q
Sbjct: 287 PTLSAASRKDSTTSTSTTSTSVTSLMELAATAEATKEIKSILKQ 330


>UniRef50_Q26632 Cluster: SFE1; n=2; Echinacea|Rep: SFE1 -
            Strongylocentrotus purpuratus (Purple sea urchin)
          Length = 1264

 Score = 35.1 bits (77), Expect = 2.3
 Identities = 30/130 (23%), Positives = 49/130 (37%)
 Frame = +2

Query: 320  SKQYMQVIDGDKGLVQFDLLNLTLVRSQDGEESYQLLANDCEGEGSENAVTCVLQTSDTE 499
            ++QY++         + D   +    S +  E   L  N  E   SE         +DT+
Sbjct: 1076 AQQYVESASDTSTGKESDTTTVPATTSTNASEDTTLSVNTSETGSSETNTLPTTSAADTK 1135

Query: 500  DRDNQEYVMVDSDNGQGPLFFLQSALPQVNSQQKKDETQVVHVTQKKVPSATEILEKAKA 679
            +   Q+YV   SD     LF + + +P   S    ++T +   T +   S T  L    A
Sbjct: 1136 EPVAQQYVESASDTSTS-LFLVPATVPATTSTNASEDTTLSVNTSETGSSETNTLPTTSA 1194

Query: 680  LQKVKATIAQ 709
                K  +AQ
Sbjct: 1195 -PNTKEPVAQ 1203


>UniRef50_A2DFD4 Cluster: Putative uncharacterized protein; n=2;
           Eukaryota|Rep: Putative uncharacterized protein -
           Trichomonas vaginalis G3
          Length = 919

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 19/82 (23%), Positives = 42/82 (51%)
 Frame = +2

Query: 449 EGSENAVTCVLQTSDTEDRDNQEYVMVDSDNGQGPLFFLQSALPQVNSQQKKDETQVVHV 628
           E  E+  + V Q +  E++  +E  + +    + P+   +   P   +++KK+ETQ V  
Sbjct: 447 ENKEDNTSAVAQETTVEEKKEEETPVEEKKEEETPVEEKKEETP---AEEKKEETQAVEE 503

Query: 629 TQKKVPSATEILEKAKALQKVK 694
            +++ P+  E  E+  A+++ K
Sbjct: 504 KKEETPAVEEKKEETPAVEEKK 525


>UniRef50_Q9FG73 Cluster: Nucleolar protein-like; n=10;
           Magnoliophyta|Rep: Nucleolar protein-like - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 682

 Score = 33.1 bits (72), Expect = 9.1
 Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 4/160 (2%)
 Frame = +2

Query: 140 KCAIVAIKPWNESCRIQVTTTKSPRS*QLS--TKMDNYRLLRSPRFDRDRTESLTELSCS 313
           K A  +I P  +      T    P++  L    K  N   L+  + +    E L +   +
Sbjct: 10  KAATKSITPPTKQLTKSKTPPMKPQTSMLKKGAKSQNKPPLKKQKKEVVEEEPLEDYEVT 69

Query: 314 GSSKQYMQVIDG-DKGLVQFDLLNLTLVRSQDGEE-SYQLLANDCEGEGSENAVTCVLQT 487
             S +  +V DG D+  +   + +  +  S DGE  S QL ++D E    E      L+ 
Sbjct: 70  DDSDEDDEVSDGSDEDDISPAVESEEIDESDDGENGSNQLFSDDEEENDEETLGDDFLEG 129

Query: 488 SDTEDRDNQEYVMVDSDNGQGPLFFLQSALPQVNSQQKKD 607
           S  ED +       D+D+    +     A+ +  + QKKD
Sbjct: 130 SGDEDEEGSLDADSDADSDDDDIVAKSDAIDRDLAMQKKD 169


>UniRef50_A4YHT7 Cluster: Methyltransferase FkbM family; n=1;
           Metallosphaera sedula DSM 5348|Rep: Methyltransferase
           FkbM family - Metallosphaera sedula DSM 5348
          Length = 303

 Score = 33.1 bits (72), Expect = 9.1
 Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
 Frame = +2

Query: 383 LTLVRSQDGEESYQLLANDCEGEGSENAVTCVLQTSDTEDRDNQEYVMVDSDNGQGPLFF 562
           L  + S+DGE S     N  +G    + +   L  S   D  N+  + V + NG   +FF
Sbjct: 75  LVTLTSRDGEVSITCRTN--KGNDLGHIMEIFLDNSYNYDVRNKVVIDVGASNGDSSIFF 132

Query: 563 LQSALPQVNSQQKKDETQVV---HVTQKKVPSATEILEKAKALQKVKATI 703
            +    ++ + +  +E+  +   +V   +V     +L KA + Q+ K T+
Sbjct: 133 AKRGAKRIIALEPDEESYALATRNVEASRVGDQVILLNKALSSQRGKITL 182


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,873,666
Number of Sequences: 1657284
Number of extensions: 12927248
Number of successful extensions: 30999
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30981
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75013275813
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)