Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_C06
         (853 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0046 - 21834942-21835055,21835145-21835220,21835297-218355...    29   3.6  
04_04_1328 - 32682087-32682200,32682290-32682365,32682442-326826...    29   3.6  
04_03_0541 - 16934460-16934573,16934663-16934738,16934815-169350...    29   3.6  
01_06_1351 - 36510599-36510712,36510802-36510877,36510954-365112...    29   3.6  
12_02_0205 - 15506167-15507576                                         28   8.2  

>05_05_0046 -
           21834942-21835055,21835145-21835220,21835297-21835553,
           21835643-21835741,21835820-21836018,21836102-21836315,
           21836470-21836538,21836626-21836950,21837065-21837235,
           21837315-21837479,21837555-21838191,21838258-21838319,
           21838581-21838652,21839256-21839291,21839361-21839489
          Length = 874

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +2

Query: 248 RLLRSPRFDRDRTESLTELSCSGSSKQYMQVIDGDKGLVQF--DLLNLTLVRSQDGEESY 421
           +L++ PR +      L+ L+    SK   + IDG K L++F     +   VR   G ++Y
Sbjct: 367 QLMKEPRENNPHVPELSPLNLCSGSKIPSRAIDGGKNLIKFLESHFSSLDVRGTVGSQAY 426

Query: 422 QLL 430
           + L
Sbjct: 427 EEL 429


>04_04_1328 -
           32682087-32682200,32682290-32682365,32682442-32682698,
           32682788-32682886,32682965-32683163,32683247-32683460,
           32683615-32683683,32683772-32684096,32684211-32684381,
           32684461-32684625,32684701-32684814,32685228-32685336,
           32685403-32685464,32685726-32685797,32686401-32686436,
           32686506-32686634
          Length = 736

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +2

Query: 248 RLLRSPRFDRDRTESLTELSCSGSSKQYMQVIDGDKGLVQF--DLLNLTLVRSQDGEESY 421
           +L++ PR +      L+ L+    SK   + IDG K L++F     +   VR   G ++Y
Sbjct: 229 QLMKEPRENNPHVPELSPLNLCSGSKIPSRAIDGGKNLIKFLESHFSSLDVRGTVGSQAY 288

Query: 422 QLL 430
           + L
Sbjct: 289 EEL 291


>04_03_0541 -
           16934460-16934573,16934663-16934738,16934815-16935071,
           16935161-16935259,16935338-16935536,16935620-16935833,
           16935988-16936056,16936144-16936468,16936583-16936753,
           16936833-16936997,16937073-16937709,16937776-16937837,
           16938098-16938169,16938689-16938724,16938794-16938922
          Length = 874

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +2

Query: 248 RLLRSPRFDRDRTESLTELSCSGSSKQYMQVIDGDKGLVQF--DLLNLTLVRSQDGEESY 421
           +L++ PR +      L+ L+    SK   + IDG K L++F     +   VR   G ++Y
Sbjct: 367 QLMKEPRENNPHVPELSPLNLCSGSKIPSRAIDGGKNLIKFLESHFSSLDVRGTVGSQAY 426

Query: 422 QLL 430
           + L
Sbjct: 427 EEL 429


>01_06_1351 -
           36510599-36510712,36510802-36510877,36510954-36511210,
           36511300-36511398,36511477-36511675,36511759-36511972,
           36512127-36512195,36512283-36512607,36512722-36512892,
           36512972-36513136,36513212-36513848,36513915-36513976,
           36514237-36514308,36514912-36514947,36515017-36515145
          Length = 874

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +2

Query: 248 RLLRSPRFDRDRTESLTELSCSGSSKQYMQVIDGDKGLVQF--DLLNLTLVRSQDGEESY 421
           +L++ PR +      L+ L+    SK   + IDG K L++F     +   VR   G ++Y
Sbjct: 367 QLMKEPRENNPHVPELSPLNLCSGSKIPSRAIDGGKNLIKFLESHFSSLDVRGTVGSQAY 426

Query: 422 QLL 430
           + L
Sbjct: 427 EEL 429


>12_02_0205 - 15506167-15507576
          Length = 469

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +2

Query: 347 GDKGLVQFDLLNLTLVRS-QDGEESYQLLANDCEGEGSENAV 469
           G  G++     NL+L+   Q G+ SYQLLA +   +GS ++V
Sbjct: 222 GASGVIGIGRGNLSLISQLQFGKFSYQLLAPEATDDGSADSV 263


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,857,308
Number of Sequences: 37544
Number of extensions: 367376
Number of successful extensions: 918
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)