Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_C06
         (853 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_45124| Best HMM Match : Sulfatase (HMM E-Value=0.17)                30   2.1  
SB_13908| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_9883| Best HMM Match : BNR (HMM E-Value=1.4e-10)                    29   6.3  
SB_5574| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   8.4  

>SB_45124| Best HMM Match : Sulfatase (HMM E-Value=0.17)
          Length = 418

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 559 LPAVRTAPGQLTAEKRRDTSGACYTKEGAVCHRDIGK 669
           LP  +T PG +     R+ S  C +K GA C  DI K
Sbjct: 247 LPKPQTLPGAIVTCATRNKSKICDSKNGAACLFDIEK 283


>SB_13908| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 629

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +2

Query: 449 EGSENAVTCVLQTSDTEDRDNQEYVMVDSDNG-QGPLFFLQSALPQVNSQQKKDETQVV 622
           E   N V  V++  + +D   Q   ++    G    LFF   A+P+   +++KDET  +
Sbjct: 256 EDRRNVVCPVIEVINADDFRYQASDVIHERGGFTWDLFFTWKAIPEAEKKRRKDETDYI 314


>SB_9883| Best HMM Match : BNR (HMM E-Value=1.4e-10)
          Length = 205

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
 Frame = +2

Query: 389 LVRSQDGEESYQLLA----NDCEGEGSENAVTCVLQTSDTEDRDNQEYVMVDSDNG 544
           L ++ DG  ++ L+     N  E    +N + CV+  + + +  N E++M+  DNG
Sbjct: 110 LFKTTDGGVTWSLVNTGFNNKIEKLSYKNDIVCVVGKNKSNNLSNPEFLMLSKDNG 165


>SB_5574| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 388

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +1

Query: 541 RSGSVVLPAVRTAPGQLTAEKRRDTSGACYTKEGAVCHRDIGKG*SI 681
           RS   +L ++  A  QL A K +D  G C  K   VC R I K  S+
Sbjct: 174 RSCLELLKSILVAHMQLVASKAKDVLGPCLVKGIEVCIRLIHKRLSV 220


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,989,060
Number of Sequences: 59808
Number of extensions: 432684
Number of successful extensions: 1202
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)