Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_C06
         (853 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    26   1.3  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    25   2.9  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    23   8.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   8.9  

>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
 Frame = +2

Query: 239 DNYRLLRSPRFDRDRTESLTELSCSGSSKQYMQVIDGDKGLVQFDLL-NLTLVRSQDGEE 415
           + Y+ +R      D  E    + C     +YM     D GL   +++ +  L+   D E 
Sbjct: 189 EGYKKIRDYEL-ADSAEFRNAMDCVFRGFRYMD----DSGLKVDEVVRDFNLINKSDLEP 243

Query: 416 SYQLLANDCEGEGSENAVTCVLQTSDTEDRDNQEY 520
             + +   C G  + +  +C+L +S  ED  N  Y
Sbjct: 244 EVRSVLASCTGTHAYDYYSCLLNSSVKEDFRNAFY 278


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +2

Query: 383 LTLVRSQDGEESYQLLANDCEGEGSENAVTCVLQTSDTE 499
           L   R Q G+E + +  +D + + +   V C L   D +
Sbjct: 218 LPYARQQFGDEEHYIFQHDNDSKHTSRTVKCYLANQDVQ 256


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 9/39 (23%), Positives = 18/39 (46%)
 Frame = +2

Query: 383 LTLVRSQDGEESYQLLANDCEGEGSENAVTCVLQTSDTE 499
           L   R + G+E + +  +D + + +   V C L   D +
Sbjct: 146 LPYARQKFGDEEHYIFQHDNDSKHTSRTVKCYLANQDVQ 184


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 195  RQPKAPDLDS 224
            RQPKAPD DS
Sbjct: 1344 RQPKAPDADS 1353


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,153
Number of Sequences: 2352
Number of extensions: 13282
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)