Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_C06
         (853 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    30   0.031
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   8.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   8.2  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 29.9 bits (64), Expect = 0.031
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +2

Query: 416  SYQLLANDCEGEGSENAVTCVLQTSDTEDRDNQEYVMVDSDNGQ 547
            SY L++N CEG+    A +        ++R  Q  V+ DS++G+
Sbjct: 1626 SYALISNQCEGDSLNVAKSLQDHDCIRQERTQQRNVISDSESGR 1669


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 45 NVYELYAHVDSNAI 4
          N+YEL+ HVD   +
Sbjct: 37 NIYELFWHVDQPTV 50


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 45 NVYELYAHVDSNAI 4
          N+YEL+ HVD   +
Sbjct: 37 NIYELFWHVDQPTV 50


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,133
Number of Sequences: 438
Number of extensions: 3637
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)