Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_C05
         (850 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    24   1.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.3  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   3.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   3.1  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   3.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   7.0  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 398 RCSRKAQAMRKKVRHFM 448
           +CS K + M KKV HF+
Sbjct: 72  KCSEKQKEMTKKVIHFL 88


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -2

Query: 588 TASTGCWFVFKD 553
           TAST CW VF D
Sbjct: 529 TASTRCWEVFMD 540


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 490 LALRSVARTVLSPQHKMPDLLPHRLSFPAAAILWSQTLYLRFSF 359
           L+ +SVA T  S  H++ D L       +A   +SQT+   + F
Sbjct: 165 LSPQSVASTASSADHQIVDRLLSHAPIDSANQWYSQTIDNSYQF 208


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 27  IYKEKRVFCSKLCFIN*YKIYIRNYHV 107
           I ++KR+ C K  FI  YK ++  YH+
Sbjct: 225 IREDKRLTCPKCPFITEYKHHL-EYHL 250


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 490 LALRSVARTVLSPQHKMPDLLPHRLSFPAAAILWSQTLYLRFSF 359
           L+ +SVA T  S  H++ D L       +A   +SQT+   + F
Sbjct: 156 LSPQSVASTASSADHQIVDRLLSHAPIDSANQWYSQTIDNSYQF 199


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 721 LRGTDTVSPVSLAL 680
           LRG  T+SPV +AL
Sbjct: 112 LRGVPTLSPVGVAL 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,788
Number of Sequences: 336
Number of extensions: 3241
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)