Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_C05
         (850 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.6  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   8.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   8.2  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 217 SSFYENGGNADEAPANPTSAASFSVLPDS 303
           S  Y  GG++  +P++P+S  S SV P S
Sbjct: 80  SPSYPGGGSSSPSPSSPSSFFS-SVSPTS 107


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 172 KFFLESSNWQLDV 210
           K+F E  NW LD+
Sbjct: 538 KYFYEIDNWMLDL 550


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 172 KFFLESSNWQLDV 210
           K+F E  NW LD+
Sbjct: 538 KYFYEIDNWMLDL 550


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,846
Number of Sequences: 438
Number of extensions: 3725
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)