Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_C04
         (925 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    25   3.2  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   3.2  
AY278446-1|AAP37003.1|  151|Anopheles gambiae microsomal glutath...    25   4.3  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    25   4.3  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    25   4.3  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   7.5  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   7.5  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   7.5  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   9.9  

>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 4/23 (17%)
 Frame = +2

Query: 191 HWLSPIPSTC----RTTRRSKPV 247
           +W++PIPS C    R+T  ++PV
Sbjct: 142 YWIAPIPSICAHYYRSTNSTEPV 164


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 519 CGRTPSVTCPRC 484
           CG  PS  CPRC
Sbjct: 942 CGFAPSAECPRC 953


>AY278446-1|AAP37003.1|  151|Anopheles gambiae microsomal
           glutathione transferase GSTMIC1protein.
          Length = 151

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -2

Query: 336 VFGAAHDPEPEPRGSAPQPHQYVCLRVRRATGFDLRVVRHVDGIGL 199
           VF    D +P  +G+ P+       RVRRA   DL  +     IGL
Sbjct: 43  VFANPEDIQPSKKGAQPKFDDPDVERVRRAHRNDLENILPFFAIGL 88


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = +1

Query: 100 KGSPLRLRESS-PPRHMHSPLRQSPSCYDADSLAQSNTVYVPNYPQVEAG 246
           +G PL L  S     H+H       S YDA   A    +Y  +Y   + G
Sbjct: 41  RGFPLSLGMSPYTNHHLHQTRTAQESPYDASIQAACKQIYEGSYSSKDCG 90


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = +1

Query: 100 KGSPLRLRESS-PPRHMHSPLRQSPSCYDADSLAQSNTVYVPNYPQVEAG 246
           +G PL L  S     H+H       S YDA   A    +Y  +Y   + G
Sbjct: 41  RGFPLSLGMSPYTNHHLHQTRTAQESPYDASIQAACKQIYEGSYSSKDCG 90


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 290 RPSRTSTSASGSVVPPAST 234
           RP  +STSAS S VP   T
Sbjct: 46  RPQHSSTSASSSSVPTLPT 64


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 290 RPSRTSTSASGSVVPPAST 234
           RP  +STSAS S VP   T
Sbjct: 46  RPQHSSTSASSSSVPTLPT 64


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = +2

Query: 176 VTTPTHWLSPIPSTCRTTRRSKPVARRTLRQTYWCGWGAE 295
           V TP      I   C  T   +P  R+  R  YW  W +E
Sbjct: 256 VATPEELTQAITVACDGTMPRQPPRRQGRRPVYW--WTSE 293


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 9.9
 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
 Frame = +2

Query: 305 SGSGSWAAPKTG--AEWLSVT 361
           +GS SW A KTG  A W++ T
Sbjct: 40  TGSSSWVADKTGNAAIWVTGT 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.134    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,232
Number of Sequences: 2352
Number of extensions: 11045
Number of successful extensions: 44
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100468593
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)