Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_C04
         (925 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S80559-1|AAB21408.1|  498|Drosophila melanogaster pdm-2 protein.       38   0.026
M81958-1|AAA28830.2|  430|Drosophila melanogaster POU homeodomai...    38   0.026
BT010239-1|AAQ23557.1|  357|Drosophila melanogaster RE49429p pro...    38   0.026
AE014134-2226|AAF53209.1|  498|Drosophila melanogaster CG12287-P...    38   0.026
AE014134-2224|AAF53208.2|  893|Drosophila melanogaster CG12287-P...    38   0.026
M93149-1|AAA28732.1|  498|Drosophila melanogaster transcription ...    37   0.034
BT010257-1|AAQ23575.1|  893|Drosophila melanogaster RE34565p pro...    35   0.18 
BT029718-1|ABL75775.1|  138|Drosophila melanogaster IP17554p pro...    29   6.8  
BT029658-1|ABL75716.1|  138|Drosophila melanogaster IP17254p pro...    29   6.8  

>S80559-1|AAB21408.1|  498|Drosophila melanogaster pdm-2 protein.
          Length = 498

 Score = 37.5 bits (83), Expect = 0.026
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 106 SPLRLRESSP-PRHMHSPLRQSPSCYDADSLAQSNTVYVPNYPQVE 240
           SPLR    SP PRH  S  R  P+   A+SL  S+ V  PN P ++
Sbjct: 211 SPLRSPSLSPVPRHSKSQQRTPPNSMTANSLGMSSAVMTPNTPSMQ 256


>M81958-1|AAA28830.2|  430|Drosophila melanogaster POU homeodomain
           protein protein.
          Length = 430

 Score = 37.5 bits (83), Expect = 0.026
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 106 SPLRLRESSP-PRHMHSPLRQSPSCYDADSLAQSNTVYVPNYPQVE 240
           SPLR    SP PRH  S  R  P+   A+SL  S+ V  PN P ++
Sbjct: 143 SPLRSPSLSPVPRHSKSQQRTPPNSMTANSLGMSSAVMTPNTPSMQ 188


>BT010239-1|AAQ23557.1|  357|Drosophila melanogaster RE49429p
           protein.
          Length = 357

 Score = 37.5 bits (83), Expect = 0.026
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 106 SPLRLRESSP-PRHMHSPLRQSPSCYDADSLAQSNTVYVPNYPQVE 240
           SPLR    SP PRH  S  R  P+   A+SL  S+ V  PN P ++
Sbjct: 70  SPLRSPSLSPVPRHSKSQQRTPPNSMTANSLGMSSAVMTPNTPSMQ 115


>AE014134-2226|AAF53209.1|  498|Drosophila melanogaster CG12287-PA,
           isoform A protein.
          Length = 498

 Score = 37.5 bits (83), Expect = 0.026
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 106 SPLRLRESSP-PRHMHSPLRQSPSCYDADSLAQSNTVYVPNYPQVE 240
           SPLR    SP PRH  S  R  P+   A+SL  S+ V  PN P ++
Sbjct: 211 SPLRSPSLSPVPRHSKSQQRTPPNSMTANSLGMSSAVMTPNTPSMQ 256


>AE014134-2224|AAF53208.2|  893|Drosophila melanogaster CG12287-PB,
           isoform B protein.
          Length = 893

 Score = 37.5 bits (83), Expect = 0.026
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 106 SPLRLRESSP-PRHMHSPLRQSPSCYDADSLAQSNTVYVPNYPQVE 240
           SPLR    SP PRH  S  R  P+   A+SL  S+ V  PN P ++
Sbjct: 606 SPLRSPSLSPVPRHSKSQQRTPPNSMTANSLGMSSAVMTPNTPSMQ 651


>M93149-1|AAA28732.1|  498|Drosophila melanogaster transcription
           factor protein.
          Length = 498

 Score = 37.1 bits (82), Expect = 0.034
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 106 SPLRLRESSP-PRHMHSPLRQSPSCYDADSLAQSNTVYVPNYPQVE 240
           SPLR    SP PRH  S  R  P+   A+SL  S+ V  PN P ++
Sbjct: 211 SPLRSPSLSPVPRHSKSQQRTPPNSMTANSLGMSSAVSTPNTPSMQ 256


>BT010257-1|AAQ23575.1|  893|Drosophila melanogaster RE34565p
           protein.
          Length = 893

 Score = 34.7 bits (76), Expect = 0.18
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +1

Query: 106 SPLRLRESSP-PRHMHSPLRQSPSCYDADSLAQSNTVYVPNYPQVE 240
           SPLR    SP P H  S  R  P+   A+SL  S+ V  PN P ++
Sbjct: 606 SPLRSPSLSPVPGHSKSQQRTPPNSMTANSLGMSSAVMTPNTPSMQ 651


>BT029718-1|ABL75775.1|  138|Drosophila melanogaster IP17554p
           protein.
          Length = 138

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = -2

Query: 405 VPRADQPLRRPARHDVTDSHSAPVFGAAHDPEPE-PRGSAPQPHQYVCLRV 256
           VPRA  P R PAR   T SHSA +        P+  R      H  +C +V
Sbjct: 67  VPRARDPRRSPARPS-TRSHSAYIEPVEEGAAPQVARDVTQSKHSEICAQV 116


>BT029658-1|ABL75716.1|  138|Drosophila melanogaster IP17254p
           protein.
          Length = 138

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = -2

Query: 405 VPRADQPLRRPARHDVTDSHSAPVFGAAHDPEPE-PRGSAPQPHQYVCLRV 256
           VPRA  P R PAR   T SHSA +        P+  R      H  +C +V
Sbjct: 67  VPRARDPRRSPARPS-TRSHSAYIEPVEEGAAPQVARDVTQSKHSEICAQV 116


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.316    0.134    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,967,004
Number of Sequences: 53049
Number of extensions: 551747
Number of successful extensions: 2604
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2599
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4546383066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)