Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_C03
(858 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0102 - 25589011-25589181,25589269-25589496,25589589-255899... 89 3e-18
05_07_0039 - 27239362-27239478,27240570-27241463 35 0.096
02_02_0421 - 10042184-10042197,10042442-10042822,10044158-100442... 33 0.39
01_01_0774 - 6004040-6004371,6004634-6005215,6005391-6005657,600... 31 1.2
09_02_0319 + 7217262-7217372,7218026-7218121,7218642-7218771,721... 31 1.6
04_04_1592 - 34649484-34649547,34650118-34650186,34650325-346504... 30 2.1
03_06_0003 + 30921197-30921388,30921514-30921632,30921742-309218... 30 2.1
07_03_0011 + 12370624-12370684,12372573-12372718,12372793-123731... 30 2.7
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 30 2.7
08_02_1460 + 27295201-27295269,27295968-27296074,27296252-272963... 29 3.6
07_03_0482 + 18589573-18589728,18589889-18590065,18590518-185906... 29 3.6
09_02_0587 - 10948888-10949124,10949281-10949393,10949830-109502... 29 6.3
04_01_0492 + 6476586-6476873,6477414-6477686,6477769-6477948,647... 28 8.3
>05_06_0102 -
25589011-25589181,25589269-25589496,25589589-25589933,
25590406-25590777,25590957-25591049,25591150-25591401,
25592019-25593224
Length = 888
Score = 89.4 bits (212), Expect = 3e-18
Identities = 51/136 (37%), Positives = 71/136 (52%)
Frame = +2
Query: 236 DGNCVISPVGNRITIYNLKQNKSNTLSFESHYNYTAVDIAPNGMTLLAVTEKGEAQIISL 415
D + ++S VGNR+ +L + S TL FES N T + ++P+G LL+V + G A +L
Sbjct: 23 DSSVLLSAVGNRVASTDLSASSSLTLPFESSSNVTRLAVSPSGDFLLSVDDAGRALYANL 82
Query: 416 TTSVVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKA 595
VLH+ FK +AV+FSPDG AV V + +P F E+ PF + R
Sbjct: 83 GRRAVLHRIAFKSAPSAVRFSPDGNLIAVAVGKLVQIWRSPA-FRKEFFPFHLLRTIPGF 141
Query: 596 LDEVTCLDWSSCSRLL 643
VT DWS S L
Sbjct: 142 AAGVTAFDWSPDSSFL 157
Score = 31.5 bits (68), Expect = 0.89
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 172 NYKFQNLLGTVYRKGDVLF 228
NY+F NLLG YR GD +F
Sbjct: 2 NYRFHNLLGAPYRGGDAVF 20
>05_07_0039 - 27239362-27239478,27240570-27241463
Length = 336
Score = 34.7 bits (76), Expect = 0.096
Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Frame = +2
Query: 272 ITIYNLKQNKSNTLSFESHYNYT-AVDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKYKF 448
+ ++NL K T E H Y AV ++P+G + + G + LT +L+K
Sbjct: 192 VKVWNLTNCKLRT-KLEGHNGYVNAVAVSPDGSLCASGGKDGTTLLWDLTEGKMLYKLDA 250
Query: 449 KQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFT-GEYRPFIMKRVFKKALDEVTCLDWS 625
++++ FSP+ + +++V + + +P + + FK + T L WS
Sbjct: 251 GAIIHSLCFSPNRYWLCAATEDSVKIWDLESKLVMQDLKPEV--QAFKSQMLYCTSLSWS 308
Query: 626 S 628
+
Sbjct: 309 A 309
>02_02_0421 -
10042184-10042197,10042442-10042822,10044158-10044261,
10044634-10044734,10044806-10045147,10045981-10046158,
10047696-10047776,10049190-10049449
Length = 486
Score = 32.7 bits (71), Expect = 0.39
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 167 SLIISFKIYSEQFTVKVMCSSXKDGNCVISPVGNRITIYNLKQNKSNTLSFESHYNY-TA 343
SL+I +Y E F +V C DG C SP GN+I N+++ T+ + +
Sbjct: 107 SLMIRMLLYCECFAARVYC----DG-CHCSPCGNKIENENIRKEAIETILLRNPLAFQPK 161
Query: 344 VDIAPNGMTL 373
++ +PN +T+
Sbjct: 162 IENSPNTVTV 171
>01_01_0774 -
6004040-6004371,6004634-6005215,6005391-6005657,
6005845-6006163
Length = 499
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -1
Query: 591 FLKTRFMMKGRYSPVKCTGAVITNTVLSQHTAKYFPSGL-NLTAFTCCLNLYLCNTTEVV 415
F++ + ++ R + KC G V+ + + + H P GL + T T C +++ + T V
Sbjct: 187 FIEEKILVAHRLAMEKCNGVVVASAIFNDHDKIRQPKGLGSETLRTVCFFMFIDDATHRV 246
>09_02_0319 +
7217262-7217372,7218026-7218121,7218642-7218771,
7219137-7219225,7219764-7219832,7220229-7220286,
7220374-7220489
Length = 222
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 359 NGMTLLAVTEK-GEAQIISLTTSVVLHKYKFKQQVNAVKFSPDGKYFAV 502
+G T +AV K E I+ + LHK+KF ++N + ++ G F +
Sbjct: 132 HGGTQIAVGNKEDELTIVDVRKLKALHKFKFNYEINEIAWNKTGDLFFI 180
>04_04_1592 -
34649484-34649547,34650118-34650186,34650325-34650444,
34650630-34650742,34650824-34650898,34651224-34651346,
34651427-34651446,34652354-34652410,34652922-34653860,
34653961-34654189,34654296-34654439,34654527-34654601,
34655363-34655433,34656103-34656205,34656407-34656633,
34656791-34656908,34657239-34657369,34657709-34657802
Length = 923
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 272 ITIYNLKQNKSNTLSFESHYNYTAVDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKYK-F 448
I +++L++ K N +VD P G + + +I + +H YK
Sbjct: 105 IKLWDLEEAKIVRTLTGHRSNCMSVDFHPFGEFFASGSLDTNLKIWDIRRKGCIHTYKGH 164
Query: 449 KQQVNAVKFSPDGKY 493
+ VNA++F+PDG++
Sbjct: 165 TRGVNAIRFTPDGRW 179
>03_06_0003 +
30921197-30921388,30921514-30921632,30921742-30921811,
30922078-30922161,30922258-30922344,30922431-30922501,
30922648-30922702,30923374-30923509,30925009-30925103,
30925203-30925357,30925435-30925543,30925761-30925817,
30925913-30926027,30926177-30926264,30926738-30927501,
30927600-30927688,30928315-30928422,30928550-30928657,
30928887-30928977,30929235-30929287,30929557-30929712,
30930763-30930825,30931491-30931535,30932075-30932130,
30933051-30933132,30933238-30933354,30933428-30933530,
30933912-30934062,30934180-30934417,30934564-30934764,
30934850-30934935,30935036-30935135
Length = 1347
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 434 HKYKFKQQVNAVKFSPDGKYFA 499
H K V KFSPDGKYFA
Sbjct: 122 HVSDHKNVVRCAKFSPDGKYFA 143
>07_03_0011 +
12370624-12370684,12372573-12372718,12372793-12373129,
12374323-12374452,12375346-12375406,12375572-12375618,
12376873-12376950,12377195-12377345,12377495-12377558,
12377735-12377893,12378007-12378128,12378952-12378981,
12379050-12379124,12379563-12379644,12379809-12379938,
12381417-12382164,12382833-12383054,12383127-12383276,
12384851-12384904,12384985-12385058,12386130-12386204,
12386365-12386584
Length = 1071
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +2
Query: 443 KFKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDW 622
K +VNA+K+ P G A C D+ + + F P +++ F +L VT
Sbjct: 460 KKNSEVNAIKWDPTGSLLASCSDDWTAKTVSVMTFYTNPIPSVVQSYFILSLGGVTRTSH 519
Query: 623 SSC 631
C
Sbjct: 520 KRC 522
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 431 LHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFV 526
+HKY F ++ AV+ S D YF V + T+ V
Sbjct: 296 IHKYNFTSEIRAVRLSKD--YFVVVLEKTINV 325
>08_02_1460 +
27295201-27295269,27295968-27296074,27296252-27296384,
27296621-27296714,27296828-27297030,27297167-27297240,
27297331-27297406,27297530-27297585,27297939-27298026,
27298115-27298255,27298338-27298487,27299015-27299221
Length = 465
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -1
Query: 699 SLNIRRXESSLSCLSIRPXRSLEQDDQSRHVTSSRAFLKTRFMMKGRY 556
SL + + S ++I + +SRHVTS F++T +M+ RY
Sbjct: 367 SLRLHDGQHPFSLMNIASVLDVTTKLESRHVTSPEKFIETLKLMEHRY 414
>07_03_0482 +
18589573-18589728,18589889-18590065,18590518-18590688,
18590913-18591029,18591614-18591742,18592210-18592311,
18592412-18592498,18592585-18592638,18594880-18595016,
18595181-18595235,18596133-18596188,18596275-18596334,
18596442-18596529,18596634-18597371,18597451-18597511,
18598301-18598403,18599180-18599311,18599393-18599477
Length = 835
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 502 VLR*YSIRDDSTGTFHRRIPALHHETCLQESPRRSDVSGLVVLLE 636
+L+ YSIR+D F R+ H+ + E P R + + V ++
Sbjct: 257 LLQQYSIRNDGGEEFRERVEPYMHQVLMYEDPMRQEAARKTVPMD 301
>09_02_0587 -
10948888-10949124,10949281-10949393,10949830-10950293,
10951223-10951766,10951902-10951971
Length = 475
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 446 FKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVF 586
+K + + + PDG+Y D M AP H +G +RP+ R F
Sbjct: 40 YKNPDDGIVYEPDGQYV----DGGENHMVAPEHQSGTFRPYSTVRSF 82
>04_01_0492 +
6476586-6476873,6477414-6477686,6477769-6477948,
6478436-6478696,6479171-6479303,6479404-6479494,
6479921-6480023,6480557-6480660,6480809-6480902,
6480985-6481140,6481224-6481286,6481388-6481453,
6481670-6481870,6481999-6482076,6482165-6482284,
6482382-6482462,6482548-6482633,6482920-6483031,
6483093-6483170,6483306-6483482
Length = 914
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +2
Query: 383 TEKGEAQIISLTTSVVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYR 562
T G I+ + V +N + F DG+Y C D+ V+++ FT E
Sbjct: 82 THNGTLHILDFQGNQVKEIAAHTATINDISFDADGEYIGSCSDDGTVVISS--LFTDEKL 139
Query: 563 PFIMKRVFKK-ALD 601
F R K ALD
Sbjct: 140 KFEYHRPMKAIALD 153
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,755,683
Number of Sequences: 37544
Number of extensions: 369268
Number of successful extensions: 815
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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