Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_C02
(847 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 365 e-101
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 361 e-100
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 361 e-100
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 360 e-100
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 359 e-99
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 359 e-99
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 357 4e-99
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 357 4e-99
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 357 4e-99
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 325 2e-89
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 290 9e-79
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 286 1e-77
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 196 1e-50
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 151 6e-37
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 131 5e-31
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 93 2e-19
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 89 3e-18
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 73 3e-13
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 68 7e-12
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 49 4e-06
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 49 4e-06
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 36 0.026
At5g43500.2 68418.m05318 expressed protein 35 0.059
At5g43500.1 68418.m05319 expressed protein 35 0.059
At3g05690.1 68416.m00636 CCAAT-binding transcription factor (CBF... 34 0.10
At1g51090.1 68414.m05744 heavy-metal-associated domain-containin... 34 0.10
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 34 0.14
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 33 0.18
At3g24550.1 68416.m03083 protein kinase family protein contains ... 33 0.18
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 33 0.18
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 33 0.18
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 33 0.18
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 33 0.18
At1g10620.1 68414.m01204 protein kinase family protein contains ... 33 0.32
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 33 0.32
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 32 0.42
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 32 0.42
At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate... 32 0.42
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 32 0.55
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 32 0.55
At1g32190.1 68414.m03959 expressed protein 31 0.73
At5g38560.1 68418.m04662 protein kinase family protein contains ... 31 0.96
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 31 0.96
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 31 0.96
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 31 0.96
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 31 0.96
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 31 0.96
At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family... 31 1.3
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 31 1.3
At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid t... 31 1.3
At2g40070.1 68415.m04923 expressed protein 31 1.3
At3g28790.1 68416.m03593 expressed protein 30 1.7
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 30 2.2
At1g61080.1 68414.m06877 proline-rich family protein 30 2.2
At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family p... 29 2.9
At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family p... 29 2.9
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 29 2.9
At1g11130.1 68414.m01274 leucine-rich repeat family protein / pr... 29 2.9
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 29 3.9
At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid t... 29 3.9
At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly id... 29 3.9
At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly id... 29 3.9
At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly id... 29 3.9
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 29 3.9
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 29 3.9
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 3.9
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.9
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.9
At5g61090.1 68418.m07665 proline-rich family protein contains pr... 28 6.8
At5g11990.1 68418.m01402 proline-rich family protein contains pr... 28 6.8
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 28 6.8
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 28 6.8
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 28 6.8
At5g29020.1 68418.m03592 hypothetical protein 28 9.0
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 28 9.0
At4g34440.1 68417.m04894 protein kinase family protein contains ... 28 9.0
At4g01985.1 68417.m00265 expressed protein 28 9.0
At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I) i... 28 9.0
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 28 9.0
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 9.0
At2g23990.2 68415.m02866 plastocyanin-like domain-containing pro... 28 9.0
At2g23990.1 68415.m02865 plastocyanin-like domain-containing pro... 28 9.0
At2g22510.1 68415.m02670 hydroxyproline-rich glycoprotein family... 28 9.0
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 9.0
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 365 bits (897), Expect = e-101
Identities = 176/206 (85%), Positives = 183/206 (88%)
Frame = +3
Query: 147 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 326
P VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVA 99
Query: 327 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 506
PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 507 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXEAV 686
GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT+AEREIVRD+K +
Sbjct: 160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLA 219
Query: 687 LRRS*LRAGNATXASXSSLEKFYXLP 764
T + SS+EK Y LP
Sbjct: 220 YIALDYEQEMETANTSSSVEKSYELP 245
Score = 58.0 bits (134), Expect = 7e-09
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1
Query: 40 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGKAPPSG 159
E++ LV DNG+GM KAGFAGDDAPRAVFPS G+ +G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 361 bits (888), Expect = e-100
Identities = 175/206 (84%), Positives = 182/206 (88%)
Frame = +3
Query: 147 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 326
P VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 99
Query: 327 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 506
PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 507 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXEAV 686
GVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+K +
Sbjct: 160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLS 219
Query: 687 LRRS*LRAGNATXASXSSLEKFYXLP 764
T + SS+EK + LP
Sbjct: 220 YIALDFEQELETSKTSSSVEKSFELP 245
Score = 58.0 bits (134), Expect = 7e-09
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1
Query: 40 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGKAPPSG 159
E++ LV DNG+GM KAGFAGDDAPRAVFPS G+ +G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 361 bits (887), Expect = e-100
Identities = 175/206 (84%), Positives = 182/206 (88%)
Frame = +3
Query: 147 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 326
P VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 99
Query: 327 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 506
PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 507 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXEAV 686
GVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+K +
Sbjct: 160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLS 219
Query: 687 LRRS*LRAGNATXASXSSLEKFYXLP 764
T + SS+EK + LP
Sbjct: 220 YIALDYEQELETSKTSSSVEKSFELP 245
Score = 58.0 bits (134), Expect = 7e-09
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1
Query: 40 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGKAPPSG 159
E++ LV DNG+GM KAGFAGDDAPRAVFPS G+ +G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 360 bits (885), Expect = e-100
Identities = 176/206 (85%), Positives = 180/206 (87%)
Frame = +3
Query: 147 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 326
P VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVA 99
Query: 327 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 506
PEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 507 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXEAV 686
GVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRDIK +
Sbjct: 160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIKEKLA 219
Query: 687 LRRS*LRAGNATXASXSSLEKFYXLP 764
T S SS+EK Y LP
Sbjct: 220 YVALDYEQELETAKSSSSVEKNYELP 245
Score = 58.0 bits (134), Expect = 7e-09
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1
Query: 40 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGKAPPSG 159
E++ LV DNG+GM KAGFAGDDAPRAVFPS G+ +G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 359 bits (884), Expect = e-99
Identities = 175/206 (84%), Positives = 180/206 (87%)
Frame = +3
Query: 147 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 326
P VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 99
Query: 327 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 506
PEEHP+LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 100 PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 507 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXEAV 686
GVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIK +
Sbjct: 160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLC 219
Query: 687 LRRS*LRAGNATXASXSSLEKFYXLP 764
T + SS+EK Y LP
Sbjct: 220 YIALDYEQELETAKTSSSVEKNYELP 245
Score = 58.0 bits (134), Expect = 7e-09
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1
Query: 40 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGKAPPSG 159
E++ LV DNG+GM KAGFAGDDAPRAVFPS G+ +G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 359 bits (884), Expect = e-99
Identities = 175/206 (84%), Positives = 180/206 (87%)
Frame = +3
Query: 147 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 326
P VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 99
Query: 327 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 506
PEEHP+LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 100 PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 507 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXEAV 686
GVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIK +
Sbjct: 160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLC 219
Query: 687 LRRS*LRAGNATXASXSSLEKFYXLP 764
T + SS+EK Y LP
Sbjct: 220 YIALDYEQELETAKTSSSVEKNYELP 245
Score = 58.0 bits (134), Expect = 7e-09
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1
Query: 40 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGKAPPSG 159
E++ LV DNG+GM KAGFAGDDAPRAVFPS G+ +G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 357 bits (879), Expect = 4e-99
Identities = 171/206 (83%), Positives = 181/206 (87%)
Frame = +3
Query: 147 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 326
P VMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+A
Sbjct: 40 PRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIA 99
Query: 327 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 506
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 507 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXEAV 686
GVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIK +
Sbjct: 160 GVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLS 219
Query: 687 LRRS*LRAGNATXASXSSLEKFYXLP 764
T + SS+EK Y LP
Sbjct: 220 FVAVDYEQEMETSKTSSSIEKNYELP 245
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +1
Query: 40 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 144
+++ +V DNG+GM KAGFAGDDAPRAVFPS G+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGR 39
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 357 bits (879), Expect = 4e-99
Identities = 171/206 (83%), Positives = 181/206 (87%)
Frame = +3
Query: 147 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 326
P VMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+A
Sbjct: 40 PRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIA 99
Query: 327 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 506
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 507 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXEAV 686
GVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIK +
Sbjct: 160 GVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLS 219
Query: 687 LRRS*LRAGNATXASXSSLEKFYXLP 764
T + SS+EK Y LP
Sbjct: 220 FVAVDYEQEMETSKTSSSIEKNYELP 245
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +1
Query: 40 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 144
+++ +V DNG+GM KAGFAGDDAPRAVFPS G+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGR 39
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 357 bits (879), Expect = 4e-99
Identities = 171/206 (83%), Positives = 181/206 (87%)
Frame = +3
Query: 147 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 326
P VMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+A
Sbjct: 40 PRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIA 99
Query: 327 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 506
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 159
Query: 507 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXEAV 686
GVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIK +
Sbjct: 160 GVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLS 219
Query: 687 LRRS*LRAGNATXASXSSLEKFYXLP 764
T + SS+EK Y LP
Sbjct: 220 FVAVDYEQEMETSKTSSSIEKNYELP 245
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +1
Query: 40 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 144
+++ +V DNG+GM KAGFAGDDAPRAVFPS G+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGR 39
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 325 bits (799), Expect = 2e-89
Identities = 150/206 (72%), Positives = 175/206 (84%)
Frame = +3
Query: 147 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 326
P R VMVGM +KD++VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+
Sbjct: 41 PRHRGVMVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLE 100
Query: 327 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 506
PEEHP+LLTEAPLNPK NREKMTQIMFE+F P+MY+ IQAVLSLY+SGRTTGIVLDSGD
Sbjct: 101 PEEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGD 160
Query: 507 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXEAV 686
GVSHTVPIYEGYALPHAILRLDLAGRDLT+YL KI+ ERGY++TT+AEREIVRDIK +
Sbjct: 161 GVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTSAEREIVRDIKEKLC 220
Query: 687 LRRS*LRAGNATXASXSSLEKFYXLP 764
+ S++++ Y LP
Sbjct: 221 YIAVDYEQEMEKATTSSAIDRTYELP 246
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +1
Query: 40 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 144
+E A+V DNG+GM KAGFAGDDAPRAVFPS G+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGR 40
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 290 bits (711), Expect = 9e-79
Identities = 130/168 (77%), Positives = 151/168 (89%)
Frame = +3
Query: 171 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 350
G+ +SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLL
Sbjct: 37 GLNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLL 96
Query: 351 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 530
TEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+SGRTTG+VLD G+ VSHTVP+
Sbjct: 97 TEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPV 156
Query: 531 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 674
YEGYALPH ILRLDL GRDLTDYL++I+TERGY++TT+AEREIVRDIK
Sbjct: 157 YEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIVRDIK 204
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 55 LVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 144
+V D G GM +AGFAGD+AP+ VFP G+
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGR 33
Score = 31.1 bits (67), Expect = 0.96
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 673 RXKLCYVALDFEQEM 717
+ KLCYVALD+EQEM
Sbjct: 204 KEKLCYVALDYEQEM 218
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 286 bits (702), Expect = 1e-77
Identities = 132/172 (76%), Positives = 154/172 (89%)
Frame = +3
Query: 165 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 344
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 345 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 524
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+ V
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIV 120
Query: 525 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXE 680
PIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY T+AERE+VRDIK +
Sbjct: 121 PIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY---TSAEREVVRDIKEQ 169
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 196 bits (479), Expect = 1e-50
Identities = 90/197 (45%), Positives = 126/197 (63%)
Frame = +3
Query: 183 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 362
KD VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 363 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 542
LNP NREKM + MFE +N +++ IQAVL+LYA G TG+V+DSGDGV+H VP+ +GY
Sbjct: 111 LNPSKNREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGY 170
Query: 543 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXEAVLRRS*LRAGNAT 722
+ PH R+++AGR +T YL+ +L+ RGY+ TA+ E VR+IK + + +
Sbjct: 171 SFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTADFETVREIKEKLCYISYDYKRESQL 230
Query: 723 XASXSSLEKFYXLPTVR 773
+ L K Y LP R
Sbjct: 231 GLETTILVKNYTLPDGR 247
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 55 LVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 144
+V DNG+G K GFAG++ P +VFP G+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGR 36
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 151 bits (366), Expect = 6e-37
Identities = 74/171 (43%), Positives = 107/171 (62%), Gaps = 8/171 (4%)
Frame = +3
Query: 186 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 356
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 357 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHT 521
+PL P +RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D GDG +H
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHV 186
Query: 522 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 674
VP+ EGY + I + +AG+D+T ++ +++ ERG + ++ R +K
Sbjct: 187 VPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVK 237
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 52 ALVVDNGSGMCKAGFAGDDAPRAVFPS 132
A+V+DNG+G K GFAG+ P + P+
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPT 34
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 131 bits (317), Expect = 5e-31
Identities = 61/146 (41%), Positives = 93/146 (63%), Gaps = 1/146 (0%)
Frame = +3
Query: 192 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 368
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 369 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 548
+ REK ++MFE + PA+++A VL+ +A+GR T +V+D G G + P+++GY L
Sbjct: 136 TQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVL 195
Query: 549 PHAILRLDLAGRDLTDYLMKILTERG 626
A++ L G LTD L+K L +G
Sbjct: 196 QKAVVSSPLGGEFLTDCLLKSLESKG 221
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +1
Query: 40 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRG 141
+EV+A+VVD GS CKAG+AG+DAP+AVFPS G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 93.1 bits (221), Expect = 2e-19
Identities = 49/118 (41%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = +3
Query: 243 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 419
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 420 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 593
Y + QAVLSLYA GR +G +D G G P+ EG A R +L G +LT
Sbjct: 117 VSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELT 174
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 89.0 bits (211), Expect = 3e-18
Identities = 51/157 (32%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Frame = +3
Query: 234 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 413
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 414 FNTPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAIL 563
F ++Y+A Q+++ LY + R +V+D G +H VP+ + L HAI
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIK 180
Query: 564 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 674
R+DL G+ T+YL ++++ R S E +V D K
Sbjct: 181 RIDLGGKAFTNYLKELVSYR--SINVMDETFLVDDAK 215
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 55 LVVDNGSGMCKAGFAGDDAPRAVFPS 132
+V+DNG G+ KAG G+ P V P+
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPN 30
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 72.5 bits (170), Expect = 3e-13
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Frame = +3
Query: 243 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 419
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 420 TPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 584
PA+ + A S L+ + GIVL G +H++P +G + R ++ G
Sbjct: 145 VPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGY 204
Query: 585 DLTDYLMKILTERGYSFTTTAEREIVRDIKXE 680
+TDYL ++L+ + ++ E D+K E
Sbjct: 205 HVTDYLKQLLSLKYPFHSSRFTWEKAEDLKLE 236
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 55 LVVDNGSGMCKAGFAGDDAPRAVF 126
+V+DNG+ + G+AG+ PR VF
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVF 45
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 68.1 bits (159), Expect = 7e-12
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +3
Query: 177 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 353
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 354 EAPLNPKANREK 389
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +1
Query: 40 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGKAPPSG 159
+EV+A+VVD GS CKAG+AG+DAP+AVFPS G +G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNG 44
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 48.8 bits (111), Expect = 4e-06
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Frame = +3
Query: 300 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 449
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 450 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 626
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 627 YSF 635
SF
Sbjct: 301 ISF 303
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 48.8 bits (111), Expect = 4e-06
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Frame = +3
Query: 300 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 449
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 450 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 626
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 627 YSF 635
SF
Sbjct: 301 ISF 303
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 36.3 bits (80), Expect = 0.026
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 415 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 561
S PP +PS P T PV PP TP+ SPTP P + +PTPS
Sbjct: 98 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 143
Score = 36.3 bits (80), Expect = 0.026
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 415 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 561
S PP +PS P T PV PP TP+ SPTP P + +PTPS
Sbjct: 116 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 161
Score = 35.1 bits (77), Expect = 0.059
Identities = 21/46 (45%), Positives = 25/46 (54%)
Frame = +1
Query: 424 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 561
PP +PS P T PV PP TP+ SPTP P + +PTPS
Sbjct: 83 PPPPTPSVPSP--TPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 125
Score = 35.1 bits (77), Expect = 0.059
Identities = 21/48 (43%), Positives = 23/48 (47%)
Frame = +1
Query: 415 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
S PP +PS P T PV PP TP+ SPTP T SP P
Sbjct: 134 SPPPPTPTPSVPSP--TPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPP 179
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +1
Query: 415 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP----CPSTRDTHSPTP 558
S PP +PS P P P S +P V+PTP PS D +PTP
Sbjct: 182 SPPPPTPTPSVPSPPDVTPTPPTPSVPSPPDVTPTPPTPSVPSPPDV-TPTP 232
Score = 29.1 bits (62), Expect = 3.9
Identities = 28/88 (31%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Frame = +1
Query: 298 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 477
+PS VSPP T + S S S PP P+ P PV
Sbjct: 126 VPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTP-SVPSPTPPV--PTDPMPSPPPPVS 182
Query: 478 PPVSCWTPATVSP---TPCPSTRDTHSP 552
PP TP+ SP TP P T SP
Sbjct: 183 PPPPTPTPSVPSPPDVTPTPPTPSVPSP 210
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 35.1 bits (77), Expect = 0.059
Identities = 21/92 (22%), Positives = 46/92 (50%)
Frame = +3
Query: 336 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 515
H V++ + + +E +T ++ E + A+ V + + +++ +G TT +++ G S
Sbjct: 238 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 296
Query: 516 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 611
V + +G +LP+ L G D+ L+ I
Sbjct: 297 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 35.1 bits (77), Expect = 0.059
Identities = 21/92 (22%), Positives = 46/92 (50%)
Frame = +3
Query: 336 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 515
H V++ + + +E +T ++ E + A+ V + + +++ +G TT +++ G S
Sbjct: 250 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 308
Query: 516 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 611
V + +G +LP+ L G D+ L+ I
Sbjct: 309 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 340
>At3g05690.1 68416.m00636 CCAAT-binding transcription factor
(CBF-B/NF-YA) family protein contains Pfam profile:
PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA)
subunit B
Length = 295
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 368 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRT 547
P + ED +V + Q+ +RR SRA A V + + R+ + H HL +R
Sbjct: 128 PLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRR 187
Query: 548 P 550
P
Sbjct: 188 P 188
>At1g51090.1 68414.m05744 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 171
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +1
Query: 421 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 570
+PP P P + T P P PA V P P P + +P P +W
Sbjct: 79 KPPQPQPQPP-QKPTAPAPAPAQAQAPALVRPAPVPVLVSSSAPQPMPMW 127
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +1
Query: 427 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 552
PC SP KP + +PV P PA +PTP PS + SP
Sbjct: 97 PCPSPPKPPAPTPKPVPPHGPPPKPAP-APTPAPSPKPAPSP 137
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +1
Query: 427 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 561
P PS P +PV PP TP P P P +P P+
Sbjct: 48 PSPCPSPPPKPQPKPVPPPACPPTPPKPQPKPAPPPEPKPAPPPA 92
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 424 PPCTSPSKPCSRCTRPVVPPVSCWTPATV-SPTPCPSTRDTHSPTPSCV 567
PP P P +P PP P P PCPS +PTP V
Sbjct: 64 PPPACPPTPPKPQPKPAPPPEPKPAPPPAPKPVPCPSPPKPPAPTPKPV 112
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/48 (47%), Positives = 24/48 (50%)
Frame = +1
Query: 415 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
S PP T PS P S T P PP S +P SP P P T T PTP
Sbjct: 526 SPSPPITVPSPP-STPTSPGSPP-SPSSPTPSSPIPSPPTPST-PPTP 570
Score = 31.5 bits (68), Expect = 0.73
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 403 CSKHSTRPPCTSPSKPCSRCTR-PVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
C+ S+ PP S C R TR PVV P TP+ P PS SP+P
Sbjct: 384 CAAFSSLPPVDCGSFGCGRSTRPPVVVPSPPTTPSPGGSPPSPSI----SPSP 432
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +1
Query: 415 STRPPCTSPSKPC--SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 567
STRPP PS P S P P +S P TV P + P+PS V
Sbjct: 403 STRPPVVVPSPPTTPSPGGSPPSPSISPSPPITVPSPPTTPSPGGSPPSPSIV 455
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 406 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 561
S +T P SP P + P+ P TP + P PS+ SP PS
Sbjct: 509 SSPTTPSPGGSPPSPSISPSPPITVPSPPSTPTSPGSPPSPSSPTPSSPIPS 560
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +1
Query: 427 PCTSPSKPCSRCTRPVVPPVSCWTPATV---SPTPCPSTRDTHSPTPS 561
P SP P + T PP + P T SP P PST T SP PS
Sbjct: 11 PSPSPPSPPTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNST-SPPPS 57
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 415 STRPPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 561
S+ PP T+P S P S T PP S P ++ P P + P PS
Sbjct: 32 SSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSPPGSLTPPLPQPS 81
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 406 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTRDTHSPT 555
S +ST PP PS P P PP S TP P+P P T SPT
Sbjct: 48 STNSTSPP---PSSPLPPSLPPPSPPGSL-TPPLPQPSPSAPITPSPPSPT 94
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +1
Query: 421 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 567
+PP T P T PVV P + P PTP P +PTP +
Sbjct: 157 KPPPTPCPPPTPTPTPPVVTPPTPTPPVITPPTPTPPVVTPPTPTPPVI 205
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 415 STRPPCTSPSKPCSR-CTRPVVPPVSCWTPATVS-PTPCPSTRDTHSPTPSCV 567
+T+PP ++P P + P PP TP V+ PTP P +PTP V
Sbjct: 143 TTKPPPSTPKPPHHKPPPTPCPPPTPTPTPPVVTPPTPTPPVITPPTPTPPVV 195
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +1
Query: 424 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 567
PP +P P T PV+ P + P PTP P +PTP +
Sbjct: 172 PPVVTPPTP----TPPVITPPTPTPPVVTPPTPTPPVITPPTPTPPVI 215
Score = 31.9 bits (69), Expect = 0.55
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +1
Query: 424 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 567
PP +P P T PVV P + P PTP P +PTP V
Sbjct: 182 PPVITPPTP----TPPVVTPPTPTPPVITPPTPTPPVITPPTPTPPVV 225
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 424 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 567
PP +P P T PV+ P + P PTP P +PTP V
Sbjct: 192 PPVVTPPTP----TPPVITPPTPTPPVITPPTPTPPVVTPPTPTPPVV 235
Score = 31.1 bits (67), Expect = 0.96
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 424 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
PP +P P T PV+ P + P PTP P +PTP
Sbjct: 202 PPVITPPTP----TPPVITPPTPTPPVVTPPTPTPPVVTPPTPTP 242
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 409 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 567
K T+PP ++P P ++ PP S P P P P T +PTP V
Sbjct: 129 KPPTKPPPSTPKPPTTK------PPPSTPKPPHHKPPPTPCPPPTPTPTPPVV 175
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +1
Query: 421 RPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 561
+PP P P S P PP S P T P P H P P+
Sbjct: 113 KPPIVKPPTKPPPSTPKPPTKPPPSTPKPPTTKPPPSTPKPPHHKPPPT 161
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +1
Query: 421 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 567
+PP T P + PP C P T PTP P +PTP +
Sbjct: 140 KPPTTKPPPSTPKPPHHKPPPTPC-PPPT--PTPTPPVVTPPTPTPPVI 185
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 424 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPST 534
PP +P P T PVV P + P PTP P T
Sbjct: 212 PPVITPPTP----TPPVVTPPTPTPPVVTPPTPTPPT 244
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 412 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 561
HS PP SP P + P PPV P V+P P ++ ++PTPS
Sbjct: 793 HSPPPPVHSPPPPSPIYSPP--PPVFSPPPKPVTPLPPATSPMANAPTPS 840
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +1
Query: 412 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP---CPSTRDTHSPTP 558
HS PP SP P P P S P SP P P HSP P
Sbjct: 725 HSPPPPVQSPPPPPVFSPPPPAPIYSPPPPPVHSPPPPVHSPPPPPVHSPPP 776
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Frame = +1
Query: 415 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVS------PTPCPSTR-DTHSPTPS 561
+T PP SP P + PPV+ PA ++ P P P+T+ D+ SP+PS
Sbjct: 85 ATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTKPDSPSPSPS 140
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +1
Query: 418 TRPPCTSPSKPCSRCTRPVV--PPVSCWTPATVSPTPCPSTRDTHSPTP 558
T PP +P+ P P PPVS P T SP P + +P P
Sbjct: 24 TSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPP 72
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Frame = +1
Query: 415 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVS------PTPCPSTR-DTHSPTPS 561
+T PP SP P + PPV+ PA ++ P P P+T+ D+ SP+PS
Sbjct: 85 ATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTKPDSPSPSPS 140
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +1
Query: 418 TRPPCTSPSKPCSRCTRPVV--PPVSCWTPATVSPTPCPSTRDTHSPTP 558
T PP +P+ P P PPVS P T SP P + +P P
Sbjct: 24 TSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPP 72
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 415 STRPPCTSPSKPCSRCTRPVVPP-VSCWTPATVSPTPCPSTRDTHSPTPS 561
+T+PP TSP P S T+ PP + P P P SP PS
Sbjct: 40 TTQPPATSPPSPPSPDTQTSPPPATAAQPPPNQPPNTTPPPTPPSSPPPS 89
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 32.7 bits (71), Expect = 0.32
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
Frame = +1
Query: 424 PPC-----TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDT-HSPTPSC 564
PPC T + C R + P PP+SC TP PCP + HS T C
Sbjct: 626 PPCLEMIFTDLTCACGRTSIP--PPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 32.3 bits (70), Expect = 0.42
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = +1
Query: 412 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
+S+ PP SP+ CTRP PP P SP P P SP P
Sbjct: 518 YSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPP-PEPYYYSSPPP 565
Score = 31.1 bits (67), Expect = 0.96
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +1
Query: 415 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
S RPP +P P S + P P+ P SP P +SP P
Sbjct: 393 SPRPPVVTPLPPPSLPSPPPPAPIFSTPPTLTSPPPPSPPPPVYSPPP 440
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +1
Query: 403 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 555
C +RPP S C R P P V+ P ++ P P+ + PT
Sbjct: 372 CKAFLSRPPVNCGSFSCGRSVSPRPPVVTPLPPPSLPSPPPPAPIFSTPPT 422
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +1
Query: 418 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
T PP SP P P PP ++P P P P +SP P
Sbjct: 424 TSPPPPSPPPPVYSPPPPPPPPPPVYSPP--PPPPPPPPPPVYSPPP 468
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 32.3 bits (70), Expect = 0.42
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 415 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 522
S PP SP PC + P PPV + P T SP P
Sbjct: 521 SPPPPPPSPPPPCPESSPP--PPVVYYAPVTQSPPP 554
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 412 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*P 579
+S PP +S P R P PP S +P+ + P P + SP P V++ P
Sbjct: 422 YSPPPPPSSKMSPSVRAYSPPPPPYSKMSPSVRAYPPPPP--PSPSPPPPYVYSSP 475
>At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 330
Score = 32.3 bits (70), Expect = 0.42
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 415 STRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTP 522
+T PP T +P+ P + T P+VPPV+ P T++P P
Sbjct: 47 ATFPPVTITPTNPAT--TVPIVPPVTTIPPPTLTPPP 81
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 31.9 bits (69), Expect = 0.55
Identities = 19/44 (43%), Positives = 20/44 (45%)
Frame = +1
Query: 427 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
P SP P S P PP S TP SP P P + SPTP
Sbjct: 217 PLPSPG-PDSPLPLPGPPPSSSPTPGPDSPLPSPGPPPSPSPTP 259
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 424 PPCTSPSK-PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
PP +SP+ P S P PP TP SP P P D+ P+P
Sbjct: 233 PPSSSPTPGPDSPLPSPGPPPSPSPTPGPDSPLPSPGP-DSPLPSP 277
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +1
Query: 415 STRPPCTSPSKPCSRCTRPVV--PPVSCWTPATVSPTPCPSTRDTHSPTP 558
+T PP T+ + P + P PPVS P TP P+ T P P
Sbjct: 36 TTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASPVTPPPAVTPTSPPAP 85
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 418 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
T PP +P+ P + PV+ P TP P P++ T SP P
Sbjct: 72 TPPPAVTPTSPPAPKVAPVISPA---TPPPQPPQSPPASAPTVSPPP 115
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 403 CSKHSTRPPCTSPSKPCSRC-TRPVVPPVSCWTPATVSPTPC 525
C K S C P+ CS C +P P SCW T C
Sbjct: 343 CKKPSCVSSCCCPTFKCSSCFGKPKCPKCSCWKCLKCPDTEC 384
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 31.1 bits (67), Expect = 0.96
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +1
Query: 424 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 561
PP SPS P T P PP +P +P+P T P+PS
Sbjct: 118 PPDASPSPPAPTTTNP--PPKPSPSPPGETPSPPGETPSPPKPSPS 161
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 424 PPCTSPSKPC-SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
PP SPS P + T P PP + +P + +PT PST PTP
Sbjct: 155 PPKPSPSTPTPTTTTSPPPPPATSASPPSSNPTD-PSTL-APPPTP 198
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = +1
Query: 415 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*P 579
S+ PP S P + P PPV P TV+ +P P SP PS T P
Sbjct: 53 SSSPPPPVVSSPPPSSSPPPSPPVITSPPPTVASSPPPPV-VIASPPPSTPATTP 106
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +1
Query: 415 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
S+ PP +SP T P S P V +P PST T P P
Sbjct: 62 SSPPPSSSPPPSPPVITSPPPTVASSPPPPVVIASPPPSTPATTPPAP 109
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 356 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRALAVRVRSYHR 484
GSP+ +G + E+D D + NI+H + +H + A+ SY R
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLYGKMSYGR 136
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 31.1 bits (67), Expect = 0.96
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +1
Query: 412 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
HS PP S P + P PPV P SP P S +SP P
Sbjct: 594 HSPPPPAPVHSPPPPVHSPPPPPPVYSPPPPVFSPPPSQSPPVVYSPPP 642
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +1
Query: 412 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP--CPSTRDTHSPTP 558
HS PP SP P P PPV P SP P HSP P
Sbjct: 541 HSPPPPVHSPPPPPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPPPVHSPPP 591
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 412 HSTRPPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
H P T+P KP T PV P T P+P P+T H P+P
Sbjct: 426 HKPTPVPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSPVPTT-PVHEPSP 474
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 31.1 bits (67), Expect = 0.96
Identities = 29/91 (31%), Positives = 32/91 (35%), Gaps = 3/91 (3%)
Frame = +1
Query: 298 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 477
IPST S SPP S H T P SPS P + P
Sbjct: 81 IPSTPSTPSPPPPAPKKSPPPPTPKKSPSPPSLTPFVPHPT--PKKSPSPPPTPSLPPPA 138
Query: 478 PPVSCWTPATVSPTP---CPSTRDTHSPTPS 561
P S TP+ PTP P HS +PS
Sbjct: 139 PKKSPSTPSLPPPTPKKSPPPPPSHHSSSPS 169
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 31.1 bits (67), Expect = 0.96
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 9/58 (15%)
Frame = +1
Query: 412 HSTRPPCTSPSKPC---------SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
H T P T PS C S + P PP TP+T S TP P T +H+PTP
Sbjct: 45 HGTPPSHTPPSSNCGSPPYDPSPSTPSHPS-PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 31.1 bits (67), Expect = 0.96
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 9/58 (15%)
Frame = +1
Query: 412 HSTRPPCTSPSKPC---------SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
H T P T PS C S + P PP TP+T S TP P T +H+PTP
Sbjct: 45 HGTPPSHTPPSSNCGSPPYDPSPSTPSHPS-PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family member At5g52430
[Arabidopsis thaliana];
Length = 449
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 403 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 555
CS PP P + T+PV PPV ++ T P+ P T SP+
Sbjct: 115 CSLTVNEPPSAFTIGPYAHETQPVTPPV--FSAFTTEPSTAPFTPPPESPS 163
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +1
Query: 412 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 555
H+ +PP P P C P P P TV P P P + PT
Sbjct: 59 HTPKPPTVKPPPPYIPCPPPPYTP----KPPTVKPPPPPYVKPPPPPT 102
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +1
Query: 424 PPCTSPSKPCSRCTRPVVPPVSCWTPATVS-PTPCPSTRDTHSPTPSCVWT*PV 582
PP +P P +P PPV P T + PCP T P P T P+
Sbjct: 130 PPPPTPYTPPPPTVKPPPPPVVTPPPPTPTPEAPCPPPPPTPYPPPPKPETCPI 183
>At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 177
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +1
Query: 424 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPST 534
P SPS P P VP S TP+ SP P P T
Sbjct: 47 PKYPSPSIPSPSVPTPSVPTPSVPTPSVPSPNPTPVT 83
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 436 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 567
SP P + P +P S TP+ PTP T SP P+ V
Sbjct: 41 SPKVPSPKYPSPSIPSPSVPTPSV--PTPSVPTPSVPSPNPTPV 82
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 406 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 561
S T P PSK SR + P P++ + AT + P S SP P+
Sbjct: 295 SSTPTSRPTLPPSKTISRSSTPTRRPIASASAATTTANPTISQIKPSSPAPA 346
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 406 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTRDTHSPTPS 561
S +T T S S P P S TP+T +P TP PST +PTPS
Sbjct: 258 SSGNTYKDTTGSSSGASPSGSPTPTP-STPTPSTPTPSTPTPSTPTPSTPTPS 309
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical
to gi_3883126_gb_AAC77826
Length = 135
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 415 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
+T PP +P P + PP + PAT P+ PS D + +P
Sbjct: 41 ATPPPVATPP-PAATPAPATPPPAATPAPATTPPSVAPSPADVPTASP 87
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +1
Query: 409 KHSTRPPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
KH PP T P KP P PP T P P P R +P P
Sbjct: 488 KHFAPPPPTPPAFKPLKGSAPPPPPPPPLPTTIAAPPPPPPPPRAAVAPPP 538
>At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 385
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 515 PHRAHLRGIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRAGNR 661
PHRA RG R P +G R+ + P R++ +Y R +R
Sbjct: 205 PHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRRSQSRDYYSDRDSDR 253
>At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 393
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 515 PHRAHLRGIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRAGNR 661
PHRA RG R P +G R+ + P R++ +Y R +R
Sbjct: 213 PHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRRSQSRDYYSDRDSDR 261
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Frame = +1
Query: 424 PPCTSPSKPCSRCTRPVV----PPVSCWTPATVSPTPCPST---RDTHSPTPSCVWT*PV 582
PP T+ P PV+ PP ++P T SP P P T SP PS V+ PV
Sbjct: 641 PPVTASPPPPPVYYTPVIQSPPPPPVYYSPVTQSPPPPPPVYYPPVTQSPPPSPVYYPPV 700
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +1
Query: 412 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP--STRDTHSPTPSCVWT*PV 582
++T+ P P P PP + P T SP P P T SP P V+ PV
Sbjct: 613 YATQSPPPPPPPTYYAVQSPPPPPPVYYPPVTASPPPPPVYYTPVIQSPPPPPVYYSPV 671
>At1g11130.1 68414.m01274 leucine-rich repeat family protein /
protein kinase family protein contains leucine
rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to leucine-rich
repeat transmembrane protein kinase 2 [Zea mays]
gi|3360291|gb|AAC27895
Length = 768
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +1
Query: 424 PPCTSPSKPCSRCTR-PVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*P 579
PP P R P +PPVS PA +P + P+P VW+ P
Sbjct: 252 PPVVDPPPATHRAPPVPRIPPVSGVPPAPFAPFAPLQPQQHPPPSPPLVWSPP 304
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +1
Query: 415 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 555
+ +PP TSP KP P PPV +P PT P T PT
Sbjct: 130 TVKPPTTSPVKP------PTTPPVQ--SPPVQPPTYKPPTSPVKPPT 168
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 421 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 573
+PP T+P T PV PP + P T +P P+ PTP V T
Sbjct: 165 KPPTTTPPVKPPTTTPPVQPPT--YNPPT-TPVKPPTAPPVKPPTPPPVRT 212
>At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 182
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +1
Query: 403 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTRDTHSPTPS 561
C+ P +P P + P VP TP+ SP+ P PS P+P+
Sbjct: 30 CNPSPKPRPLPNPKVPSPKVPTPSVPSPYVPTPSVPSPSVPTPSVPSPSVPSPN 83
>At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 249
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +2
Query: 434 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSR 586
RR PSR+L+ R RSY R R+ +RRR R+ R+P R S R+R
Sbjct: 121 RRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKRMDDSLSPRAR 167
>At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 260
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +2
Query: 434 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSR 586
RR PSR+L+ R RSY R R+ +RRR R+ R+P R S R+R
Sbjct: 132 RRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKRMDDSLSPRAR 178
>At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 290
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +2
Query: 434 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSR 586
RR PSR+L+ R RSY R R+ +RRR R+ R+P R S R+R
Sbjct: 162 RRSPSRSLS-RSRSYSRSRSPVRRR---ERSVEERSRSPKRMDDSLSPRAR 208
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 415 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 561
S PP +SPS P PP +P++ P P PS+ S +PS
Sbjct: 37 SPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPP-PSSSPLSSLSPS 84
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 415 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 561
S PP +SPS P PP +P++ P P PS+ S +PS
Sbjct: 86 SPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPP-PSSSPLSSLSPS 133
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +1
Query: 403 CSKHSTRPPCTSPSKPCSRCTRPVVPPV-SCWTPATVSPTPCPSTRD 540
C + PPC P P P +PP PA P P P T D
Sbjct: 70 CPPPPSPPPCPPPPSPPPSPPPPQLPPPPQLPPPAPPKPQPSPPTPD 116
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/56 (33%), Positives = 23/56 (41%)
Frame = +1
Query: 412 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*P 579
+S PP SP P + P P V P SP P HSP P V++ P
Sbjct: 550 YSPPPPVHSPPPPVY--SSPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVFSPP 603
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 412 HSTRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 561
HS PP SP P PP+ TP T +PTP S+ T PTPS
Sbjct: 623 HSPPPPVYSPPPPTFSPPPTHNTNQPPMGAPTP-TQAPTP--SSETTQVPTPS 672
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 201 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 380
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 381 REK 389
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 201 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 380
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 381 REK 389
REK
Sbjct: 225 REK 227
>At5g61090.1 68418.m07665 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420;
common family members: At4g18570, At3g25690, At4g04980
[Arabidopsis thaliana]
Length = 344
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 418 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
TRP T+PS + T V PVS P +V+P+P + + + P
Sbjct: 157 TRPTSTAPSPVSAHPTSVVPSPVSV-HPTSVAPSPVSACLTSEASKP 202
>At5g11990.1 68418.m01402 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 181
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 406 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
S+ ST P SP P S+ + + PP S P + SP P P + HSP P
Sbjct: 33 SECSTCPTICSP--PPSKPSPSMSPPPSPSLPLSSSPPPPPPHK--HSPPP 79
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 475 VPPVSCWTPATVSPTPCPSTRDTHSPTPS 561
+PPV+ TP+ ++ P P T +PT S
Sbjct: 38 LPPVTAETPSPIASPPVPVNEPTPAPTTS 66
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = +1
Query: 412 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 558
HS PP SP P + P PPV P SP P HSP P
Sbjct: 600 HSPPPPVHSPPPPVY--SPPPPPPVHSPPPPVFSPPP-----PVHSPPP 641
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 479 HRYRAGLRRRCL-PHRAHLRGIRTPPRHPASG 571
+ ++AG R R L P + L +R PPR PA+G
Sbjct: 601 YTFKAGDRVRFLGPSTSSLASLRAPPRGPATG 632
>At5g29020.1 68418.m03592 hypothetical protein
Length = 847
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 433 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT-PSCV 567
++P+KPC T PV PP + P PS + +PT PS V
Sbjct: 26 SNPAKPCGSRTLPVNPPYPTTGKRKRADPPKPSRGLSPNPTDPSGV 71
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 424 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP 528
PP + P P + P+ PP S P +SP P P
Sbjct: 1087 PPSSLPPPPPAALFPPLPPPPSQPPPPPLSPPPSP 1121
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Frame = +1
Query: 436 SPSKPCSRCTRPVVPPVSCWTPATVSP----TPCPSTRDTHSPT 555
+PS P + PV PP TP+ SP P P D + T
Sbjct: 89 NPSPPAPEGSTPVTPPAPPQTPSNQSPERPTPPSPGANDDRNRT 132
>At4g01985.1 68417.m00265 expressed protein
Length = 579
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -3
Query: 557 GVGECVSLVDGHGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHGG 423
GVG V G VG V G +GG +G G G V GG
Sbjct: 507 GVGGGVRGAVGGAVGGGVGGAGRGSGGASGGAGAGGGAGGGVGGG 551
>At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I)
identical to P II nitrogen sensing protein GLB I
(GI:7268574) [Arabidopsis thaliana]; similar to nitrogen
regulatory protein P-II (PII signal transducing protein)
(SP:O30794) {Nostoc punctiforme}
Length = 196
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = -1
Query: 538 PS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATY-MAGVLNVSNMIWVIFSLLALGLR 362
PS + V ++PS S +PVV S+ Y + ++ + V +LL +G+R
Sbjct: 40 PSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 99
Query: 361 GASVSRT---GCSSGAT 320
G +VS G G+T
Sbjct: 100 GVTVSDVRGFGAQGGST 116
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 436 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 561
SPS P S + P P TP+T S P P + + S PS
Sbjct: 124 SPSTPSSPPSTPSTPSSPPSTPSTPSSPPSPPSPPSPSLPPS 165
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 289 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 200
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g23990.2 68415.m02866 plastocyanin-like domain-containing
protein
Length = 226
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Frame = +1
Query: 445 KPCSRCTRPVVPPVSCWTPAT---VSPTPCP-STRDTHSPTPS 561
KP P +PP TPA PTP P S+ T +P P+
Sbjct: 154 KPGPAAVTPTLPPKPSTTPAAPAPAPPTPSPKSSTSTMAPAPA 196
>At2g23990.1 68415.m02865 plastocyanin-like domain-containing
protein
Length = 207
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Frame = +1
Query: 445 KPCSRCTRPVVPPVSCWTPAT---VSPTPCP-STRDTHSPTPS 561
KP P +PP TPA PTP P S+ T +P P+
Sbjct: 135 KPGPAAVTPTLPPKPSTTPAAPAPAPPTPSPKSSTSTMAPAPA 177
>At2g22510.1 68415.m02670 hydroxyproline-rich glycoprotein family
protein similar to proline-rich cell wall protein
[Gossypium barbadense] gi|451544|gb|AAA79364; contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 124
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 424 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 561
PP T+ P T P PP + T P P PS++ P P+
Sbjct: 36 PPVTTTFPPLPTTTMPPFPPSTSLPQPTAFP-PLPSSQIPSLPNPA 80
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 281 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 174
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,367,950
Number of Sequences: 28952
Number of extensions: 421373
Number of successful extensions: 1837
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 1387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1741
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1960634400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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