Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_B24
(843 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 38 4e-04
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 38 4e-04
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 36 0.001
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 32 0.019
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 32 0.019
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 32 0.025
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 31 0.058
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 29 0.23
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 28 0.31
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 28 0.31
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 28 0.41
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 28 0.41
AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical prot... 25 3.8
AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl c... 25 3.8
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 24 5.0
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 24 5.0
AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical prot... 24 5.0
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 23 8.8
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 23 8.8
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 23 8.8
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 37.9 bits (84), Expect = 4e-04
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2
Query: 428 LEQYPSAEVVVLGDFNAHHQEWLGSRTTD 514
LE + +VVV GDFNA H+EW RT D
Sbjct: 121 LEGFSHPQVVVAGDFNARHEEWGSPRTCD 149
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 37.9 bits (84), Expect = 4e-04
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = +2
Query: 428 LEQYPSAEVVVLGDFNAHHQEWLGSRTTDLPGRAAYDFTLAYGLSQL 568
LE + VV+ GDFNA H EW GSR +L G GLS L
Sbjct: 110 LEASSHSHVVIAGDFNAWHTEW-GSRRNNLRGEELLQMVEVLGLSIL 155
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 36.3 bits (80), Expect = 0.001
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +2
Query: 428 LEQYPSAEVVVLGDFNAHHQEWLGSRTTDLPGRAAYDFTLAYGL 559
LE +VVV GDFNA H+EW GSR ++ G + + GL
Sbjct: 167 LEAQSHPQVVVAGDFNAWHEEW-GSRRSNERGEVLLEASQQLGL 209
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 32.3 bits (70), Expect = 0.019
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 395 IEHVQEGTNRVLEQ-YPSAEVVVLGDFNAHHQEWLGSRTTDLPGRAAYD 538
+E +E R+ ++ Y +++ GDFNA EW GS++T+ G A +
Sbjct: 95 LEKFEEMLKRISDEVYDVNPIIISGDFNAWATEW-GSKSTNARGNAVLE 142
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 32.3 bits (70), Expect = 0.019
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 428 LEQYPSAEVVVLGDFNAHHQEWLGSRTTD 514
LE ++VV+ GDFNA H EW R ++
Sbjct: 111 LETLTHSQVVIAGDFNAWHVEWGSERNSE 139
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 31.9 bits (69), Expect = 0.025
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 428 LEQYPSAEVVVLGDFNAHHQEWLGSR 505
LE + VVV GDFNA H+EW R
Sbjct: 173 LEAASHSRVVVAGDFNAWHEEWGSGR 198
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 30.7 bits (66), Expect = 0.058
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 428 LEQYPSAEVVVLGDFNAHHQEWLGSRTT 511
LE ++VV+ GDFNA H EW +R +
Sbjct: 130 LEASTHSQVVIDGDFNAWHTEWGSARNS 157
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 28.7 bits (61), Expect = 0.23
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 446 AEVVVLGDFNAHHQEWLGSRT 508
+ V++ GDFNA H +W SRT
Sbjct: 115 SRVLLAGDFNAMHLDWGSSRT 135
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 28.3 bits (60), Expect = 0.31
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 395 IEHVQEGTNRV-LEQYPSAEVVVLGDFNAHHQEWLGSRT 508
+ +E N V +E VV+ GDFNA H+ W +RT
Sbjct: 96 VAEFEEFLNAVEIEVSAHPNVVLGGDFNAWHEAWGSART 134
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 28.3 bits (60), Expect = 0.31
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 419 NRVLEQYPSAEVVVLGDFNAHHQEWLGSRTTDLPGRAAYDFTLAYG--LSQLVTQPT 583
N V E +V+ GDFNA EW GS+ T+ G A + G L T PT
Sbjct: 102 NLVAELDGHRPLVIAGDFNAWAVEW-GSKRTNSRGDAVLESFARLGVTLGNAGTTPT 157
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 27.9 bits (59), Expect = 0.41
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 462 LETLMLTTKSGWGPEPLTSRVGLPMISPWPTASPS 566
L T+M TT + P P+ +GLP +P PS
Sbjct: 575 LSTMMTTTTTTTEPPPIVQVIGLPAPTPRNNYKPS 609
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 27.9 bits (59), Expect = 0.41
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 462 LETLMLTTKSGWGPEPLTSRVGLPMISPWPTASPS 566
L T+M TT + P P+ +GLP +P PS
Sbjct: 574 LSTMMTTTTTTTEPPPIVQVIGLPAPTPRNNYKPS 608
>AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical protein
protein.
Length = 278
Score = 24.6 bits (51), Expect = 3.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 477 LTTKSGWGPEPLTSRVGLPMISPWPTASPSW 569
++ KS P P+ +VG+P+ P P A P +
Sbjct: 159 VSEKSKTVPVPVFQKVGVPVPHPVPIAVPHY 189
>AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl
cyclase beta subunit protein.
Length = 649
Score = 24.6 bits (51), Expect = 3.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 74 RGLHNNLDAVHHHLETAQPAL 136
R NLDA+H HL T P +
Sbjct: 94 RDFLQNLDALHDHLGTLYPGM 114
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 24.2 bits (50), Expect = 5.0
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -2
Query: 170 PEQISASPSEKGGQAAPSQDGGVRRRGCYVDP 75
PE + A ++ + ++GG R G Y+ P
Sbjct: 24 PEPMDADAADDDALMSEDEEGGTRIGGIYIPP 55
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 24.2 bits (50), Expect = 5.0
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -2
Query: 464 QEPPPPQMGTAQARG*SPLAHALSELNL 381
Q+P PP A + G P H+++ N+
Sbjct: 939 QQPLPPAPAAASSAGVQPTEHSVNSTNV 966
>AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical protein
protein.
Length = 257
Score = 24.2 bits (50), Expect = 5.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 224 RKAGVCVFVRADACCRR 274
R GVCV++ + CC R
Sbjct: 28 RNFGVCVWMLCEVCCSR 44
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 23.4 bits (48), Expect = 8.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 62 FSNVRGLHNNLDAVHHHLETAQPALLFLTET 154
+ NVRGL H + A L+ LTET
Sbjct: 84 YQNVRGLRTKTKEFHLAVSEADFDLIALTET 114
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 23.4 bits (48), Expect = 8.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 26 LSAIPHSTFNVDFSNVRGLHNNLDAV 103
+S I ++T ++ +V G+HN DAV
Sbjct: 1147 VSQIQNATKEFEWRHVPGIHNPADAV 1172
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 23.4 bits (48), Expect = 8.8
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -2
Query: 404 HALSELNLHHCCGTCTGTRRLGYS 333
H + N C C+G R+G+S
Sbjct: 395 HLAKDCNAEVKCAVCSGPHRVGHS 418
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,013,848
Number of Sequences: 2352
Number of extensions: 24808
Number of successful extensions: 94
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 94
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -