Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_B24
         (843 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80214-5|CAJ76929.1|  916|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z80214-4|CAB02263.1|  982|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z68751-5|CAA92975.1|  468|Caenorhabditis elegans Hypothetical pr...    28   7.2  

>Z80214-5|CAJ76929.1|  916|Caenorhabditis elegans Hypothetical
           protein C27D8.3b protein.
          Length = 916

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 38  PHSTFNVDFSNVRGLHN-NLDAVHHHLETAQPALLFLTETQISAP 169
           PH    + +S  R  +N N    HHH     P+L+  T T I +P
Sbjct: 832 PHDVCEIVYSAARPNNNLNQQQQHHHQSHHHPSLIPPTTTSIRSP 876


>Z80214-4|CAB02263.1|  982|Caenorhabditis elegans Hypothetical protein
            C27D8.3a protein.
          Length = 982

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 38   PHSTFNVDFSNVRGLHN-NLDAVHHHLETAQPALLFLTETQISAP 169
            PH    + +S  R  +N N    HHH     P+L+  T T I +P
Sbjct: 898  PHDVCEIVYSAARPNNNLNQQQQHHHQSHHHPSLIPPTTTSIRSP 942


>Z68751-5|CAA92975.1|  468|Caenorhabditis elegans Hypothetical
           protein T05E11.5 protein.
          Length = 468

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 98  AVHHHLETAQPALLFLTETQISAP 169
           AV HH + AQPALL+L    +  P
Sbjct: 407 AVMHHFKAAQPALLYLVPCCLFVP 430


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,680,575
Number of Sequences: 27780
Number of extensions: 528400
Number of successful extensions: 1350
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)