Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_B22
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0312 - 7168332-7168408,7168492-7168621,7168793-7168861,716...    34   0.14 
07_03_1795 + 29603694-29605208,29605423-29605649,29605739-296060...    29   5.1  
01_01_0977 - 7717808-7717837,7718227-7718327,7718449-7718548,771...    29   6.7  
12_02_1050 + 25689933-25690954,25691021-25691215,25691357-25691423     28   8.9  
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351     28   8.9  
08_02_1420 + 26942777-26942905,26944415-26944511,26944596-269449...    28   8.9  
05_03_0110 + 8500204-8500460,8502544-8502612,8502725-8502790,850...    28   8.9  

>09_02_0312 -
           7168332-7168408,7168492-7168621,7168793-7168861,
           7168947-7169066,7169356-7169440,7169565-7169650,
           7169762-7169914,7170008-7170130,7170974-7171357
          Length = 408

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 236 GSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQ 367
           G   +TL +G L   WY+ +   N+  K  L   P+P+ +T VQ
Sbjct: 100 GGLAKTLQLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITNVQ 143


>07_03_1795 +
           29603694-29605208,29605423-29605649,29605739-29606071,
           29606229-29606475,29606948-29607076,29607161-29607376,
           29607454-29607577,29608377-29608612
          Length = 1008

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = -1

Query: 482 LAIAQGXLRHGSNSSSAIASNVLHTGLARVHSARPLHTAVPLS*LVE 342
           L  A G  RH       +AS   H+      S+ P+  AVPLS L +
Sbjct: 4   LRAASGLARHALRRRVPVASRFFHSARPAWRSSAPVPRAVPLSRLTD 50


>01_01_0977 -
           7717808-7717837,7718227-7718327,7718449-7718548,
           7718706-7718822,7718913-7718990,7719980-7720058,
           7720184-7720249,7720373-7720441,7720890-7721188
          Length = 312

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 254 LIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAV 364
           LI GF    WY L+   N++ K      P+P  ++ +
Sbjct: 114 LITGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVI 150


>12_02_1050 + 25689933-25690954,25691021-25691215,25691357-25691423
          Length = 427

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = +1

Query: 313 GQTGINRATISTNYDSGTAVCSGLAECTRASPVWSTFDAMADELLDPCLXYP---WAIAK 483
           GQT +   T ST   S T++  GLA+CTR   V      ++D ++     +P   WA  K
Sbjct: 172 GQTKLRLDTGSTRLGS-TSMMYGLAQCTRDLAVSECSTCLSDYIVQLSKIFPNNSWAAIK 230


>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
          Length = 415

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 19/65 (29%), Positives = 27/65 (41%)
 Frame = -3

Query: 426 VERTPHRASAGTLSEAAAHSCTAVIVSGNGSSVNASLPTTLLAELNIYHAAHRKPTISVS 247
           +E TP R S+G   + A+ +  A      GSS+  SL    +         HR   +  S
Sbjct: 281 IELTPERRSSGVKRQLASGTSLAKKPRSQGSSITCSLCKVTMTSPRAL-VEHRASLLHRS 339

Query: 246 RLEPL 232
            L PL
Sbjct: 340 NLAPL 344


>08_02_1420 +
           26942777-26942905,26944415-26944511,26944596-26944962,
           26945286-26945793
          Length = 366

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 480 QTSYHTVLASFHLESASLLCPH 545
           QTSYHTV    +  S+SL+CP+
Sbjct: 73  QTSYHTVGDHSNAASSSLVCPY 94


>05_03_0110 +
           8500204-8500460,8502544-8502612,8502725-8502790,
           8502885-8502963,8504270-8504390,8504486-8504581,
           8505403-8505515,8505612-8505689,8507777-8507893,
           8508194-8508293,8508463-8508563,8509093-8509110
          Length = 404

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 242 RRETLIVGFLCAAWYMLSSASNVVGKLALTELPFP 346
           R   L+ GF    WY L+   N++ K      P+P
Sbjct: 96  RYPALVTGFFFFMWYFLNVIFNILNKKIFDYFPYP 130


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,171,983
Number of Sequences: 37544
Number of extensions: 421378
Number of successful extensions: 924
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)