Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_B22
         (905 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   6.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   8.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   8.8  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 546 CVGIGDWHFPNGNLRAQCG 490
           C G G W+ P+G    + G
Sbjct: 234 CKGDGKWYLPSGGCHCKPG 252


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 354 IVSGNGSSVNASL 316
           IV GNG SVN  L
Sbjct: 364 IVQGNGDSVNVQL 376


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 354 IVSGNGSSVNASL 316
           IV GNG SVN  L
Sbjct: 364 IVQGNGDSVNVQL 376


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,575
Number of Sequences: 438
Number of extensions: 4799
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)