Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_B22
         (905 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g01550.1 68416.m00085 triose phosphate/phosphate translocator...    36   0.049
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator...    35   0.065
At5g17630.1 68418.m02067 glucose-6-phosphate/phosphate transloca...    30   2.4  
At5g54800.1 68418.m06826 glucose-6-phosphate/phosphate transloca...    28   7.4  
At5g46110.1 68418.m05669 phosphate/triose-phosphate translocator...    28   7.4  
At1g15780.1 68414.m01893 expressed protein                             28   9.8  

>At3g01550.1 68416.m00085 triose phosphate/phosphate translocator,
           putative similar to SWISS-PROT:P52178 triose
           phosphate/phosphate translocator [Cauliflower]{Brassica
           oleracea}
          Length = 383

 Score = 35.5 bits (78), Expect = 0.049
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +2

Query: 233 SGSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQ 367
           SGS  + L +G +   WY+L+   N+  K  L   P+P T+TA Q
Sbjct: 70  SGSLVKGLKLGGMFGVWYLLNIYYNIFNKQVLRVYPYPATVTAFQ 114


>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
           putative similar to SWISS-PROT:P52178 triose
           phosphate/phosphate translocator [Cauliflower] {Brassica
           oleracea}
          Length = 408

 Score = 35.1 bits (77), Expect = 0.065
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +2

Query: 233 SGSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQ 367
           SG   + L +G L A WY+ +   N+  K  L  L  P+T+T VQ
Sbjct: 99  SGKLTKVLELGLLFAMWYLFNIYFNIYNKQVLKALHAPMTVTLVQ 143


>At5g17630.1 68418.m02067 glucose-6-phosphate/phosphate
           translocator, putative similar to
           glucose-6-phosphate/phosphate-translocator precursor
           [Solanum tuberosum] gi|2997593|gb|AAC08526
          Length = 417

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +2

Query: 242 RRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQ 367
           + +TL +G +   WY  +   N+  K AL   P+P  + + Q
Sbjct: 106 KAKTLQLGIVFGLWYFQNIVFNIFNKKALNVFPYPWLLASFQ 147


>At5g54800.1 68418.m06826 glucose-6-phosphate/phosphate
           translocator, putative identical to glucose 6
           phosphate/phosphate translocator [Arabidopsis thaliana]
           gi|7229675|gb|AAF42936
          Length = 388

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +2

Query: 221 AMGTSGSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFP-LTMT 358
           A  T     + L +G   A W+ L+   N+  K  L   P+P LT T
Sbjct: 84  AAETKSEAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTST 130


>At5g46110.1 68418.m05669 phosphate/triose-phosphate translocator,
           putative identical to phosphate/triose-phosphate
           translocator precursor [Arabidopsis thaliana]
           gi|3983125|gb|AAC83815; similar to triose
           phosphate/phosphate translocator, chloroplast precursor
           (CTPT)[Cauliflower]{Brassica oleracea} SWISS-PROT:P52177
          Length = 410

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 254 LIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAV 364
           L+ GF    WY L+   N++ K      P+P  ++ +
Sbjct: 106 LVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVI 142


>At1g15780.1 68414.m01893 expressed protein
          Length = 1335

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 206  LIKKRAMGTSGSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQ 367
            +++  A+GT G     L+  F      +L+S++   GK + TELP    + AV+
Sbjct: 1002 VVQSLAIGTPGISASPLLQEFTSPDGNILNSSTITSGKPSATELPIERLIRAVK 1055


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,613,937
Number of Sequences: 28952
Number of extensions: 336878
Number of successful extensions: 765
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2139598560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)