Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_B21
(865 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 35 0.061
At5g55110.1 68418.m06870 stigma-specific Stig1 family protein si... 31 0.99
At2g04620.1 68415.m00470 cation efflux family protein potential ... 31 0.99
At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearl... 31 1.3
At3g08670.1 68416.m01007 expressed protein 30 2.3
At4g22210.1 68417.m03210 hypothetical protein 29 3.0
At3g06680.1 68416.m00788 60S ribosomal protein L29 (RPL29B) simi... 29 3.0
At3g57120.1 68416.m06359 protein kinase family protein contains ... 29 4.0
At3g08660.1 68416.m01006 phototropic-responsive protein, putativ... 29 4.0
At5g43030.1 68418.m05250 DC1 domain-containing protein contains ... 29 5.3
At5g42140.1 68418.m05130 zinc finger protein, putative / regulat... 29 5.3
At4g16920.1 68417.m02552 disease resistance protein (TIR-NBS-LRR... 29 5.3
At2g02700.1 68415.m00210 DC1 domain-containing protein contains ... 29 5.3
At2g02690.1 68415.m00208 hypothetical protein 29 5.3
At4g26880.1 68417.m03868 stigma-specific Stig1 family protein si... 28 7.0
At2g02630.1 68415.m00202 DC1 domain-containing protein contains ... 28 7.0
At1g28050.1 68414.m03434 zinc finger (B-box type) family protein 28 7.0
At5g65840.1 68418.m08285 expressed protein 28 9.2
At3g49970.1 68416.m05464 phototropic-responsive protein, putativ... 28 9.2
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 35.1 bits (77), Expect = 0.061
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = +2
Query: 176 CSICNAEFLDPGDLKQHLKVHSTVSTDTERRKTC--DFCECKYADVEEYAYHIRDSHLAA 349
C C AEF P LKQH++ HS ER TC D C Y + H+ +H
Sbjct: 68 CQECGAEFKKPAHLKQHMQSHS-----LERSFTCYVDDCAASYRRKDHLNRHLL-THKGK 121
Query: 350 SKFC--QLCSRVFIDFNKYKQHTRKHYT 427
C + C F +H +K+++
Sbjct: 122 LFKCPKENCKSEFSVQGNVGRHVKKYHS 149
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +2
Query: 332 DSHLAASKFCQLCSRVFIDFNKYKQHTRKHYTAKSEYNACSQCSALYINEMELERH 499
D +++ CQ C F KQH + H +S C+A Y + L RH
Sbjct: 59 DEESSSNHTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRH 114
>At5g55110.1 68418.m06870 stigma-specific Stig1 family protein
similar to stigma-specific protein STIG1 [Nicotiana
tabacum] GI:496647; contains Pfam profile PF04885:
Stigma-specific protein, Stig1
Length = 163
Score = 31.1 bits (67), Expect = 0.99
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -2
Query: 573 STDDRNGYRLCRNTPSSTCLWFSTSCRSNSISLMYSAEHCEHALY-SDLAV*CFRVCCLY 397
STDD+N LC+N C + T CR + + Y HC + DL C C Y
Sbjct: 108 STDDKN-CGLCKNK----CKFGQTCCRGQCVYVAYDKRHCGECNHRCDLGEFCVYGLCNY 162
>At2g04620.1 68415.m00470 cation efflux family protein potential
member of the cation diffusion facilitator (CDF) family,
or cation efflux (CE) family, see PMID:11500563
Length = 798
Score = 31.1 bits (67), Expect = 0.99
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 407 HTRKHYTAKSEYNACSQCSALYINEMELERHEVENHKHVD---EGVFLHNLYPFLSSV 571
H +H + + C+ + + ++ + E+ E + H+H+D EG+FLH L + SV
Sbjct: 615 HDHEHQSHSHNHEECNH-NHDHHSDHQPEKSEKKEHRHIDHNMEGIFLHVLADTMGSV 671
>At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearly
identical to ubiquitin-protein ligase 1 [Arabidopsis
thaliana] GI:7108521; E3, HECT-domain protein family;
similar to GI:7108521, GB:AAF36454 from [Arabidopsis
thaliana]
Length = 3891
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -2
Query: 210 PGSRNSALHIEHITSTSASYCRSLSMFKTVSKFASPPMVVQRL 82
PG RN H + + T +YCR+L F + SP Q L
Sbjct: 1389 PGERNIWSHSKWLVDTLQNYCRALDYFVNSTYLLSPTSQTQLL 1431
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 29.9 bits (64), Expect = 2.3
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Frame = +3
Query: 117 SRPS*TSTMIYSTMLKSM*YVQYATRSFSIPEI*NNT*KFTARY-RPTRSGGRRATSANA 293
SRP+ +S++ ++ S Y + T S I N + + Y RP+ R ++SA
Sbjct: 149 SRPARSSSVTRPSISTSQ-YSSF-TSGRSPSSILNTSSASVSSYIRPSSPSSRSSSSARP 206
Query: 294 NTPTSRNTLTTYAT--RISPPRSFASFVRVCLSI----STNTNSIRESIIPPNLNTTRAR 455
+TPT ++ + +T RI P S +S + S+ ST T+ + S PN+ +R
Sbjct: 207 STPTRTSSASRSSTPSRIRPGSSSSSMDKARPSLSSRPSTPTSRPQLSASSPNIIASRP- 265
Query: 456 NAQRCTSTK 482
N++ T T+
Sbjct: 266 NSRPSTPTR 274
>At4g22210.1 68417.m03210 hypothetical protein
Length = 86
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = -2
Query: 621 SESSALTLVNVDIFMFSTDDRNGYRLCRNTPSSTCLWFSTSCRSNSISLMYSAEHCEHAL 442
S + +V + I + S D G R+C + + FS + + NS+ ++ C A
Sbjct: 7 STFAVAVVVCLSILLMSPTD--GRRVCDSAAGLCSMLFSCNTQCNSLGRNFTGGECSDAR 64
Query: 441 YSDLAV*CFRVCC 403
+ L+V C+ CC
Sbjct: 65 FPGLSV-CY--CC 74
>At3g06680.1 68416.m00788 60S ribosomal protein L29 (RPL29B) similar
to 60S ribosomal protein L29 GB:P25886 from (Rattus
norvegicus)
Length = 83
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 341 LAASKFCQLCSRVFIDFNKYKQHTRKHYTAKSEYN 445
LA+ F QLC V + K K HT + +AK+ N
Sbjct: 7 LASLPFTQLCCAVVTEMAKSKNHTAHNQSAKAHKN 41
>At3g57120.1 68416.m06359 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 456
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +3
Query: 243 RYRPTRSGGR----RATSANANTPTSRNTLTTYATRISPPRSFASFVRVCLSISTNTNSI 410
R RP++S GR R + + +NT T+ T T+ + + S + ++ T+ S+
Sbjct: 34 RSRPSQSQGRHPSTRRSPSTSNTGTTTTTTTSNSNKTGASSSSSGAASSSVASRTSLASL 93
Query: 411 RESIIPPN 434
RES +P N
Sbjct: 94 RES-LPEN 100
>At3g08660.1 68416.m01006 phototropic-responsive protein, putative
contains similarity to root phototropism RPT2
[Arabidopsis thaliana] gi|6959488|gb|AAF33112, a signal
transducer of phototropic response PMID:10662859
Length = 582
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 215 LKQHLKVHSTVSTDTERRKTCDFCECKYADVEEYAYHI 328
+ +LK H + T+ ER+K C+F +CK +E + H+
Sbjct: 410 IDMYLKAHPLL-TEEERKKLCNFIDCKKLS-QEASNHV 445
>At5g43030.1 68418.m05250 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 564
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 420 IIPPNLNTTRARNAQRCTSTKWN*NGTRWKTINTSMKAYSCITCT 554
+I N + R + R S W+ R K +N AYSC+TCT
Sbjct: 165 VICVNRHDHRISHVPRLGSGNWSCGVCR-KEVNGMYGAYSCLTCT 208
>At5g42140.1 68418.m05130 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1073
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 270 RRATSANANTPTSRNTLTTYATRISPPRSFASF-VRVCLSISTNTNSIRESIIPPN 434
RR A TP+S ++ ++ R SPPRS + V L ST SI ES+ N
Sbjct: 768 RRGPPKPAVTPSSSRPVSPFSRRSSPPRSVTPIPLNVGLGFST---SIAESLKKTN 820
>At4g16920.1 68417.m02552 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1304
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = -2
Query: 501 SCRSNSISLMYSAEHCEHALYSDLAV*CFRVCCLYLLKSINTR-----EQSWQNFEAARC 337
SC S ++ Y+ E ALY D F+ CC +K R +++ N + R
Sbjct: 1169 SCVPLSENIEYTCERFWDALYDDDYKNYFKFCCSNRIKECGVRLLYVYQETEYNQQTTRS 1228
Query: 336 ESRMW*AYSSTSAYLH 289
E RM ++ Y++
Sbjct: 1229 EKRMGMTSGTSEEYIN 1244
>At2g02700.1 68415.m00210 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 499
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 440 YNACSQCSALYINEMELERHEVENHKHVDEGVFLHNLYPFLSSVLNMKMSTFTKVKADDS 619
Y C +C Y E E+ HV + L+N+ F +L+ K KA+
Sbjct: 142 YYFCVECDQRYHKECVESPLEINYPSHVKHSLQLYNVKTFEHCILSTK-------KAEVL 194
Query: 620 DYSCTVCD 643
Y C +CD
Sbjct: 195 LYYCALCD 202
>At2g02690.1 68415.m00208 hypothetical protein
Length = 623
Score = 28.7 bits (61), Expect = 5.3
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = +2
Query: 89 CTTMGGDANFETVLNIDNDLQYDAEVDVICSICNAEFLDPGDLKQHLKVHSTVSTDTERR 268
C M +E ++ D Y+ +DV+C A +P D + H +S D +
Sbjct: 449 CNRMSNSFGYECLME---DCGYN--LDVVC----ASISEPFDYQGHHHP-LFLSLDPKEE 498
Query: 269 KTCDFCECKYADVEEYAYHIRDSHLAASKFCQLC 370
C C +Y E Y R + + +C+LC
Sbjct: 499 PICHIC--RYKHDEHYLTFCRGDEASGADWCELC 530
>At4g26880.1 68417.m03868 stigma-specific Stig1 family protein
similar to stigma-specific protein STIG1 [Nicotiana
tabacum] GI:496647; contains Pfam profile PF04885:
Stigma-specific protein, Stig1
Length = 152
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = -2
Query: 615 SSALTLVNVDIFMFSTDDRNGYRLCRNTPSSTCLWFSTSCRSNSISLMYSAEHC 454
+S +T N S+DD N C+N C + T CR + + Y HC
Sbjct: 83 NSTMTCCNNKCIDVSSDDNN-CGACKNK----CKFSQTCCRGQCVYVAYDKRHC 131
>At2g02630.1 68415.m00202 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 440
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Frame = +2
Query: 485 ELERHEVENHKHVDEGVFL-----HNLYPFLSSVLN-MKMSTFTKVKADDSD-YSCTVCD 643
E+E +VE+ K + +GV L H+LY +S V N K + ++ + Y C CD
Sbjct: 136 EVEEDDVESFKRIADGVILHFSHRHHLYFEISGVYNGNKFCQACALPVNEGNLYVCVGCD 195
Query: 644 Y 646
+
Sbjct: 196 F 196
>At1g28050.1 68414.m03434 zinc finger (B-box type) family protein
Length = 433
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 663 IFTYNIYKRKTVGSLACDSCGN 728
+ T N+ RK V S CD+CGN
Sbjct: 36 VHTANLLSRKHVRSQICDNCGN 57
>At5g65840.1 68418.m08285 expressed protein
Length = 275
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +2
Query: 287 ECKYADVEEYAYHIRDSH--LAASKFCQLCSRVFIDFNKYKQHTRKHYTAKS 436
EC YAD E AY + + L + F ++VF F++ ++ T K+YT ++
Sbjct: 175 ECLYADPERKAYDVLGLYFGLGRTFFNPASTKVFSRFSEIREAT-KNYTIEA 225
>At3g49970.1 68416.m05464 phototropic-responsive protein, putative
similar to root phototropism RPT2 [Arabidopsis thaliana]
gi|6959488|gb|AAF33112, a signal transducer of
phototropic response PMID:10662859
Length = 526
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 227 LKVHSTVSTDTERRKTCDFCECKYADVEEYAY 322
LK H +S + E++K C +CK + YA+
Sbjct: 368 LKTHPNIS-EVEKKKVCSLMDCKKLSRDVYAH 398
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,075,170
Number of Sequences: 28952
Number of extensions: 358914
Number of successful extensions: 1253
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2019160800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -