Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_B16
         (853 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,121...    56   3e-08
07_01_0181 + 1274177-1274200,1274335-1276161,1276519-1277448,127...    56   5e-08
09_01_0007 + 212984-213949                                             32   0.67 
06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881     32   0.67 
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072...    31   0.88 

>02_01_0177 +
           1214226-1214294,1214707-1214794,1216095-1216308,
           1216413-1216738,1216860-1217013,1217377-1217438,
           1218078-1218133,1219456-1221279,1221775-1222698,
           1222855-1222866
          Length = 1242

 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 28/91 (30%), Positives = 54/91 (59%)
 Frame = +3

Query: 396 LSKSSKRHTLEPHRLFKRRRMELLLEFFIRALVELDDWVVGAWNEREARKALSKGNSKAL 575
           L +S ++   +  ++ +      +   +I+ALV L+D++  A   +EA+K +S  N+KAL
Sbjct: 409 LQESFEKLNKQLEKVVRVNESSTVPNMYIKALVLLEDFLAEALANKEAKKKMSSSNAKAL 468

Query: 576 TSLRQKLRKYTKDFEAEISKFREDPDLPDDN 668
            +++QKL+K  K +E  I + RE P+  +D+
Sbjct: 469 NAMKQKLKKNNKQYENLIQECREHPERFEDD 499



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 28/74 (37%), Positives = 44/74 (59%)
 Frame = +2

Query: 266 SDDEEETKRVVRSMKEKRYEELEGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQ 445
           SD+ +  +RVVRS+K+KR EEL+  +  +RN  KI D+ +   SFE+L K   +   VV+
Sbjct: 369 SDESDSGQRVVRSLKDKRNEELKITVDQMRNAMKINDWVNLQESFEKLNKQLEK---VVR 425

Query: 446 KEENGVAPRILHKS 487
             E+   P +  K+
Sbjct: 426 VNESSTVPNMYIKA 439


>07_01_0181 +
           1274177-1274200,1274335-1276161,1276519-1277448,
           1278314-1278367
          Length = 944

 Score = 55.6 bits (128), Expect = 5e-08
 Identities = 25/64 (39%), Positives = 44/64 (68%)
 Frame = +3

Query: 477 FIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFREDPDL 656
           +++ALV L+D++  A   +EA+K +S  N+KAL +++QKL+K  K +E  I + RE P+ 
Sbjct: 120 YVKALVLLEDFLAEALANKEAKKKMSSSNAKALNAMKQKLKKNNKQYENLIQECREHPER 179

Query: 657 PDDN 668
            +D+
Sbjct: 180 FEDD 183



 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 28/74 (37%), Positives = 44/74 (59%)
 Frame = +2

Query: 266 SDDEEETKRVVRSMKEKRYEELEGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQ 445
           SD+ +  +RVVRS+K+KR EEL+  +  +RN  KI D+ +   SFE+L K   +   VV+
Sbjct: 53  SDESDSGQRVVRSLKDKRNEELKITVDQMRNAMKINDWVNLQESFEKLNKQLEK---VVR 109

Query: 446 KEENGVAPRILHKS 487
             E+   P +  K+
Sbjct: 110 VNESTTVPNMYVKA 123


>09_01_0007 + 212984-213949
          Length = 321

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +2

Query: 242 APAPVYTFSDDEEETKRVVRSMKEK-RYEELEGIIHSIRNHRKI-KDFSSALASFEELQK 415
           AP P+   SD+EEE     +S +E   + +   I+ ++  HR+   +  S  A F+ELQ 
Sbjct: 177 APGPIVLSSDEEEEEPARKKSCRENWSFSDAVKILTALTAHRQAGGELPSGHALFDELQH 236

Query: 416 AYTR 427
             +R
Sbjct: 237 QLSR 240


>06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881
          Length = 697

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 19/63 (30%), Positives = 34/63 (53%)
 Frame = +2

Query: 266 SDDEEETKRVVRSMKEKRYEELEGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQ 445
           S D+E+ K  +RS++E+  +E     HS   HRK+K          E++ A+ +A   ++
Sbjct: 293 SKDQEKVKAALRSLQEEIEDERHLRKHSESLHRKLK------KELSEMKSAFVKAVKDLE 346

Query: 446 KEE 454
           KE+
Sbjct: 347 KEK 349


>10_08_0425 - 17806117-17806401,17806862-17806984,17807076-17807222,
            17807307-17807450,17808557-17808668,17808762-17808898,
            17809016-17809156,17810921-17811004,17811275-17811742,
            17811858-17811936,17812494-17812506,17813884-17814460,
            17814502-17814774,17814899-17815045,17815354-17815413,
            17816124-17816510
          Length = 1058

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +2

Query: 278  EETKRVVRSMKEKRYEELEGIIHSIRNHRKIKDFSSALASFEELQKA-YTRAAPVVQKEE 454
            +E +R +R  KE+  +E+E +   IR    +  + + L    +  KA +T + P ++K+ 
Sbjct: 878  KEREREMRKRKEREEQEMERVKLKIRRKEAVSSYQALLVEIIKDPKASWTESKPRLEKDP 937

Query: 455  NGVA 466
             G A
Sbjct: 938  QGRA 941


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,215,875
Number of Sequences: 37544
Number of extensions: 297838
Number of successful extensions: 920
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)