Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_B16
(853 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U91326-1|AAC27674.1| 913|Homo sapiens eIF-3 p110 subunit protein. 77 6e-14
U46025-1|AAD03462.1| 913|Homo sapiens translation intiation fac... 77 6e-14
BC107692-1|AAI07693.1| 252|Homo sapiens EIF3C protein protein. 77 6e-14
BC071705-1|AAH71705.1| 913|Homo sapiens eukaryotic translation ... 77 6e-14
BC001571-1|AAH01571.1| 913|Homo sapiens eukaryotic translation ... 77 6e-14
AY762099-1|AAX07826.1| 913|Homo sapiens cell migration-inducing... 77 6e-14
AK000739-1|BAA91352.1| 913|Homo sapiens protein ( Homo sapiens ... 77 6e-14
AC002544-1|AAC27426.1| 913|Homo sapiens Translation initiation ... 77 6e-14
L40371-1|AAC41738.1| 286|Homo sapiens thyroid receptor interact... 30 9.3
BC012448-1|AAH12448.1| 581|Homo sapiens thyroid hormone recepto... 30 9.3
AF168418-1|AAF01278.1| 581|Homo sapiens activating signal coint... 30 9.3
>U91326-1|AAC27674.1| 913|Homo sapiens eIF-3 p110 subunit protein.
Length = 913
Score = 77.4 bits (182), Expect = 6e-14
Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Frame = +2
Query: 170 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 331
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 332 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKE 451
+I +IRN KI+D + L FE L KAY +A +V KE
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE 100
Score = 72.1 bits (169), Expect = 2e-12
Identities = 27/64 (42%), Positives = 49/64 (76%)
Frame = +3
Query: 474 FFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFREDPD 653
F+IR L +L+D++ W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ ++++P+
Sbjct: 105 FYIRILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPE 164
Query: 654 LPDD 665
D
Sbjct: 165 QSAD 168
>U46025-1|AAD03462.1| 913|Homo sapiens translation intiation factor
eIF-3 p110 subunit protein.
Length = 913
Score = 77.4 bits (182), Expect = 6e-14
Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Frame = +2
Query: 170 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 331
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 332 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKE 451
+I +IRN KI+D + L FE L KAY +A +V KE
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE 100
Score = 72.1 bits (169), Expect = 2e-12
Identities = 27/64 (42%), Positives = 49/64 (76%)
Frame = +3
Query: 474 FFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFREDPD 653
F+IR L +L+D++ W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ ++++P+
Sbjct: 105 FYIRILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPE 164
Query: 654 LPDD 665
D
Sbjct: 165 QSAD 168
>BC107692-1|AAI07693.1| 252|Homo sapiens EIF3C protein protein.
Length = 252
Score = 77.4 bits (182), Expect = 6e-14
Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Frame = +2
Query: 170 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 331
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 332 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKE 451
+I +IRN KI+D + L FE L KAY +A +V KE
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE 100
Score = 72.1 bits (169), Expect = 2e-12
Identities = 27/64 (42%), Positives = 49/64 (76%)
Frame = +3
Query: 474 FFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFREDPD 653
F+IR L +L+D++ W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ ++++P+
Sbjct: 105 FYIRILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPE 164
Query: 654 LPDD 665
D
Sbjct: 165 QSAD 168
>BC071705-1|AAH71705.1| 913|Homo sapiens eukaryotic translation
initiation factor 3, subunit C protein.
Length = 913
Score = 77.4 bits (182), Expect = 6e-14
Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Frame = +2
Query: 170 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 331
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 332 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKE 451
+I +IRN KI+D + L FE L KAY +A +V KE
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE 100
Score = 72.1 bits (169), Expect = 2e-12
Identities = 27/64 (42%), Positives = 49/64 (76%)
Frame = +3
Query: 474 FFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFREDPD 653
F+IR L +L+D++ W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ ++++P+
Sbjct: 105 FYIRILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPE 164
Query: 654 LPDD 665
D
Sbjct: 165 QSAD 168
>BC001571-1|AAH01571.1| 913|Homo sapiens eukaryotic translation
initiation factor 3, subunit 8, 110kDa protein.
Length = 913
Score = 77.4 bits (182), Expect = 6e-14
Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Frame = +2
Query: 170 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 331
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 332 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKE 451
+I +IRN KI+D + L FE L KAY +A +V KE
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE 100
Score = 72.1 bits (169), Expect = 2e-12
Identities = 27/64 (42%), Positives = 49/64 (76%)
Frame = +3
Query: 474 FFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFREDPD 653
F+IR L +L+D++ W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ ++++P+
Sbjct: 105 FYIRILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPE 164
Query: 654 LPDD 665
D
Sbjct: 165 QSAD 168
>AY762099-1|AAX07826.1| 913|Homo sapiens cell migration-inducing
protein 17 protein.
Length = 913
Score = 77.4 bits (182), Expect = 6e-14
Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Frame = +2
Query: 170 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 331
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 332 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKE 451
+I +IRN KI+D + L FE L KAY +A +V KE
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE 100
Score = 72.1 bits (169), Expect = 2e-12
Identities = 27/64 (42%), Positives = 49/64 (76%)
Frame = +3
Query: 474 FFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFREDPD 653
F+IR L +L+D++ W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ ++++P+
Sbjct: 105 FYIRILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPE 164
Query: 654 LPDD 665
D
Sbjct: 165 QSAD 168
>AK000739-1|BAA91352.1| 913|Homo sapiens protein ( Homo sapiens
cDNA FLJ20732 fis, clone HEP08682. ).
Length = 913
Score = 77.4 bits (182), Expect = 6e-14
Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Frame = +2
Query: 170 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 331
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 332 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKE 451
+I +IRN KI+D + L FE L KAY +A +V KE
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE 100
Score = 72.1 bits (169), Expect = 2e-12
Identities = 27/64 (42%), Positives = 49/64 (76%)
Frame = +3
Query: 474 FFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFREDPD 653
F+IR L +L+D++ W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ ++++P+
Sbjct: 105 FYIRILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPE 164
Query: 654 LPDD 665
D
Sbjct: 165 QSAD 168
>AC002544-1|AAC27426.1| 913|Homo sapiens Translation initiation
factor eIF-p110 protein.
Length = 913
Score = 77.4 bits (182), Expect = 6e-14
Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Frame = +2
Query: 170 MSRFFATGTXXXXXXXXXXXPVVRAPA------PVYTFSDDEEETKRVVRSMKEKRYEEL 331
MSRFF TG+ +V P S+DEE+TKRVVRS K+KR+EEL
Sbjct: 1 MSRFFTTGSDSESESSLSGEELVTKPVGGNYGKQPLLLSEDEEDTKRVVRSAKDKRFEEL 60
Query: 332 EGIIHSIRNHRKIKDFSSALASFEELQKAYTRAAPVVQKE 451
+I +IRN KI+D + L FE L KAY +A +V KE
Sbjct: 61 TNLIRTIRNAMKIRDVTKCLEEFELLGKAYGKAKSIVDKE 100
Score = 72.1 bits (169), Expect = 2e-12
Identities = 27/64 (42%), Positives = 49/64 (76%)
Frame = +3
Query: 474 FFIRALVELDDWVVGAWNEREARKALSKGNSKALTSLRQKLRKYTKDFEAEISKFREDPD 653
F+IR L +L+D++ W ++E +K ++K N+KAL++LRQK+RKY +DFE+ I+ ++++P+
Sbjct: 105 FYIRILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITSYKQNPE 164
Query: 654 LPDD 665
D
Sbjct: 165 QSAD 168
>L40371-1|AAC41738.1| 286|Homo sapiens thyroid receptor interactor
protein.
Length = 286
Score = 30.3 bits (65), Expect = 9.3
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 257 YTFSDDEEETKRVVRSMKEKRYEELEGIIHSIRNHRKIK-DFSSALASFEE--LQKAYTR 427
Y SD + ++ R +KR EEL + H+ R +K+ DF+ EE L + ++R
Sbjct: 165 YFASDSNQWLSKLERETLQKREEELRELRHASRLSKKVTIDFAGRKILEEENSLAEYHSR 224
Query: 428 AAPVVQKEENGVAPRILHK 484
+Q NG + L K
Sbjct: 225 LDETIQAIANGTLNQPLTK 243
>BC012448-1|AAH12448.1| 581|Homo sapiens thyroid hormone receptor
interactor 4 protein.
Length = 581
Score = 30.3 bits (65), Expect = 9.3
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 257 YTFSDDEEETKRVVRSMKEKRYEELEGIIHSIRNHRKIK-DFSSALASFEE--LQKAYTR 427
Y SD + ++ R +KR EEL + H+ R +K+ DF+ EE L + ++R
Sbjct: 289 YFASDSNQWLSKLERETLQKREEELRELRHASRLSKKVTIDFAGRKILEEENSLAEYHSR 348
Query: 428 AAPVVQKEENGVAPRILHK 484
+Q NG + L K
Sbjct: 349 LDETIQAIANGTLNQPLTK 367
>AF168418-1|AAF01278.1| 581|Homo sapiens activating signal
cointegrator 1 protein.
Length = 581
Score = 30.3 bits (65), Expect = 9.3
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 257 YTFSDDEEETKRVVRSMKEKRYEELEGIIHSIRNHRKIK-DFSSALASFEE--LQKAYTR 427
Y SD + ++ R +KR EEL + H+ R +K+ DF+ EE L + ++R
Sbjct: 289 YFASDSNQWLSKLERETLQKREEELRELRHASRLSKKVTIDFAGRKILEEENSLAEYHSR 348
Query: 428 AAPVVQKEENGVAPRILHK 484
+Q NG + L K
Sbjct: 349 LDETIQAIANGTLNQPLTK 367
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,219,700
Number of Sequences: 237096
Number of extensions: 1586223
Number of successful extensions: 4240
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4239
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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