Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_B15
         (860 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   2.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.2  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    23   9.0  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 408  PLVDDEGVSSSKEESNKAPA 349
            PL++ EG+   KE  N AP+
Sbjct: 2540 PLIEYEGIYEGKESENNAPS 2559


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 408  PLVDDEGVSSSKEESNKAPA 349
            PL++ EG+   KE  N AP+
Sbjct: 2541 PLIEYEGIYEGKESENNAPS 2560


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +2

Query: 695 LPDE*HCLLRSHRSYSXYRQ 754
           LPDE HC+   H     Y Q
Sbjct: 184 LPDEDHCMKLLHAQIDQYEQ 203


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 819,936
Number of Sequences: 2352
Number of extensions: 14651
Number of successful extensions: 63
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)