Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_B14
(885 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24945| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.044
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 33 0.23
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 32 0.54
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 32 0.71
SB_20363| Best HMM Match : Involucrin (HMM E-Value=0.31) 31 1.2
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 31 1.2
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 31 1.2
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 30 2.2
SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_19708| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_20442| Best HMM Match : Chitin_bind_3 (HMM E-Value=7.4e-05) 29 6.6
SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064) 29 6.6
SB_19450| Best HMM Match : GTP_EFTU (HMM E-Value=7.9e-08) 29 6.6
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 8.7
SB_9946| Best HMM Match : IQ (HMM E-Value=0.00018) 28 8.7
SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 28 8.7
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_35468| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.8
>SB_24945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 35.9 bits (79), Expect = 0.044
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 449 IXEHPKFNFVGKTIRSKRTHYEXXTXXTPLCKMAVLGXGSLTGPAK 586
+ +HPKFNFVGK + + ++ T KM++LG GS+ K
Sbjct: 109 VKDHPKFNFVGKLLGPRGNTFKRLQNSTG-TKMSILGKGSMRDKEK 153
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 33.5 bits (73), Expect = 0.23
Identities = 27/97 (27%), Positives = 30/97 (30%)
Frame = +1
Query: 532 PPVQDGCTRXGLPDRTGQXXEDPARSXDPTXPHLAXPPSXXRXRPXXPPXXGSPXELXXA 711
PP G P R G P S P PPS R P P +P + A
Sbjct: 307 PPPSRGSAPPPPPARMGTAPPPPPPSRSSQRP---PPPS--RGAPPPPSMGMAPPPVGGA 361
Query: 712 LXGXPPPSXXPGXXVPXVXVSXXXPXXLXXGPXRXPP 822
PPP G P + P L P PP
Sbjct: 362 APPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPPPP 398
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 32.3 bits (70), Expect = 0.54
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Frame = +2
Query: 182 KRNTTQGKPEELDQNGEEGIKIN---EKAGEYMR-ELLSEKIKLNNSKFPLSMKLIDQEV 349
KR + K E++Q EE EK E MR E E++K + +KF +M + + +V
Sbjct: 423 KRGCEEEKDSEIEQLREELRTTRDDFEKECERMRGEFQEERVK-DYAKFCTAMAVRNAQV 481
Query: 350 TKVQASGRITKDSKYVDVFRD 412
++Q + +T K ++VFR+
Sbjct: 482 LEIQRAELLTDHEKEMEVFRE 502
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 31.9 bits (69), Expect = 0.71
Identities = 22/72 (30%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Frame = +1
Query: 547 GCTRXGLPDRTGQXXEDPARSXDPTXPHLAXPPSXXRXRPXXPPXXGSPXELXXALXGXP 726
G + P + Q P R P+ P PPS RP PP P L L P
Sbjct: 191 GTSHPTSPSQITQPPPPPPRPP-PSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPP 249
Query: 727 P-PSXXPGXXVP 759
P P+ P P
Sbjct: 250 PIPNMPPTLPPP 261
>SB_20363| Best HMM Match : Involucrin (HMM E-Value=0.31)
Length = 353
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 143 DKYDKNGYNSGDFKRNTTQGKPEELDQNGEEGIKINE 253
D NG+ SGD + ++T GKP + + E G KI +
Sbjct: 11 DDSKANGHMSGDSQSSSTSGKPSQQESQTELGQKIEK 47
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 143 DKYDKNGYNSGDFKRNTTQGKPEELDQNGEEGIKINE 253
D NG+ SGD + ++T GKP + + E G KI +
Sbjct: 289 DDSKANGHMSGDSQSSSTSGKPSQQESQTELGQKIEK 325
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/95 (25%), Positives = 25/95 (26%)
Frame = +2
Query: 599 PPXHXTLRXLI*PXXLPGXDXGXXPPRXXAPPPNXPMPLXXXHXLLXXXAPXSPXXGFXX 778
PP R P + G PP AP P P AP P
Sbjct: 129 PPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASP 188
Query: 779 XXPXXXPRGPXGXPXXXXPXPFXTPRAPCXPXPXL 883
P P P P P P AP P L
Sbjct: 189 PPPSGGPPPPPPPPPPPPPPPILELAAPPPPGSVL 223
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +2
Query: 671 PPRXXAPPPNXPMPLXXXHXLLXXXAPXSPXXGFXXXXPXXXPRGPXGXPXXXXPXP 841
PP A PP+ P P P F P P GP G P P P
Sbjct: 1235 PPPPPAMPPDGPPKFMGLPPPPPGMRPMPPQPPFMPPPPRMQPPGPPGPPGPPGPQP 1291
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/65 (27%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = +1
Query: 568 PDRTGQXXEDPARSXDP-TXPHLAXPPSXXRXRPXXPPXXGSPXELXXALXGXPPPSXXP 744
P +T E P+ S + P PP P PP +P + PPP P
Sbjct: 900 PSQTPGGSESPSASPPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPP 959
Query: 745 GXXVP 759
G P
Sbjct: 960 GGSAP 964
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 756 PPGXGFXXSPXXPXXGAPXXAPXXGARXXSXPPGP 860
PPG P P AP P G S PP P
Sbjct: 914 PPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPP 948
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 30.3 bits (65), Expect = 2.2
Identities = 23/91 (25%), Positives = 30/91 (32%)
Frame = +1
Query: 472 LCGENY*VQKDPL*XXYXXDPPVQDGCTRXGLPDRTGQXXEDPARSXDPTXPHLAXPPSX 651
L +N Q D + PP+Q + + G P + P PH PP
Sbjct: 195 LAAQNPLAQADRPHQLFADAPPIQTSTSLPPMIPPVGMLGHPPMGAPPP--PHSMPPPGM 252
Query: 652 XRXRPXXPPXXGSPXELXXALXGXPPPSXXP 744
P P G P + G PPP P
Sbjct: 253 PP--PGMMPPPGFPPMGMPGMGGMPPPGMPP 281
>SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1884
Score = 30.3 bits (65), Expect = 2.2
Identities = 31/121 (25%), Positives = 34/121 (28%)
Frame = -2
Query: 884 GGXXXXRRGPGGXXXGAGXXXGGXRWGPXXRXXGXXXETXTXGTXXPGXXEGGGXPXRAX 705
GG G GG G G GG G G G GGG
Sbjct: 1760 GGGGGGGMGGGGGMAGGGGGMGGGGMAAGGGEFGGGEGMGGGGMAGGGGGMGGGG---GG 1816
Query: 704 XSSXGEPSXGGXXGRXLXXEGGQAR*GXVGSNXRAGSSSXWPVRSGSPXRVQPSCTGGSX 525
GE G EGG A G G + + SSS S S + G
Sbjct: 1817 MGGGGEGMGAAGGGMGAGGEGGGAGGGGGGYSAQKSSSSFSYTSSSSSSAARKGAYSGYR 1876
Query: 524 L 522
L
Sbjct: 1877 L 1877
>SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/45 (28%), Positives = 17/45 (37%)
Frame = +1
Query: 625 PHLAXPPSXXRXRPXXPPXXGSPXELXXALXGXPPPSXXPGXXVP 759
P ++ PP+ P P G P + PPP PG P
Sbjct: 243 PPISGPPTTSMSGPPIPVHHGMPPQYGPGRRDMPPPGAPPGMLPP 287
>SB_19708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1548
Score = 29.5 bits (63), Expect = 3.8
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Frame = +2
Query: 122 FDLIKMADKYDKNGYNSGDFKRNTTQGK-PEELDQN---GEEGIKINEKAGEYMRELLSE 289
F + YD G S D ++ TT+GK PE + +N G G + E + + + SE
Sbjct: 659 FQTLDRKGGYDNPGQASDDDEKETTRGKAPEPIYENTKDGRCGSAVYENSNVALEAVTSE 718
Query: 290 KIKLNNSK-FPLS-MKLIDQEVTKVQASGRITKDSKYV 397
+ L K F LS +L +EV V + + YV
Sbjct: 719 GVGLAQVKCFNLSPEELESREVIPVDIAFDELPEKYYV 756
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 29.5 bits (63), Expect = 3.8
Identities = 32/106 (30%), Positives = 34/106 (32%), Gaps = 5/106 (4%)
Frame = +3
Query: 561 GAP*PDRPXGXRPRPXIXPYG-PSSSLXXFXVEXSAXXPPGRXLP-XRTXXCP-XRXSTX 731
GAP P P P P + P G P + PPG P P R
Sbjct: 525 GAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGASHPRVPPPGAPHPRVPPPGAPHPRVPPP 584
Query: 732 FXXXXXXXPPGXGFXXSPXXPXXGAP-XXAPXXGA-RXXSXPPGPP 863
PPG P P GAP P GA PPGPP
Sbjct: 585 GTPHPRVPPPG---APHPKVPPPGAPYQRLPYSGAYHPRLPPPGPP 627
>SB_20442| Best HMM Match : Chitin_bind_3 (HMM E-Value=7.4e-05)
Length = 288
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +1
Query: 616 PTXPHLAXPPSXXRXRPXXPPXXGSPXELXXALXGXPPPSXXPG 747
P P A PP P P P A PPP+ PG
Sbjct: 210 PLPPTAAPPPPPTTGAPPPTPVTNKPPPPRPATTQAPPPTAAPG 253
>SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064)
Length = 1064
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 311 KFPLSMKLIDQEVTKVQASGRITKDSK 391
K+ L M L+++ +T+V A GRIT+D +
Sbjct: 764 KYGLRMSLLERLMTRVAAYGRITEDEE 790
>SB_19450| Best HMM Match : GTP_EFTU (HMM E-Value=7.9e-08)
Length = 926
Score = 28.7 bits (61), Expect = 6.6
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +2
Query: 152 DKNGYNSGDFKRNTTQGKPEELDQN-GEEGIKINEKAG-EYMREL-LSEKIKLNNSKFPL 322
D NGYN + NT Q + E +K+ A Y ++ I NN+ P+
Sbjct: 502 DMNGYNEVAARNNTAQALSTAIKLRVNNEFVKVTVDAWYRYSASFQMAGVITANNTSTPV 561
Query: 323 SMKLIDQEVTKVQASGRITK 382
S +I E KV A R K
Sbjct: 562 SRSIISLEGQKVLAVRRSKK 581
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/74 (28%), Positives = 23/74 (31%)
Frame = -2
Query: 884 GGXXXXRRGPGGXXXGAGXXXGGXRWGPXXRXXGXXXETXTXGTXXPGXXEGGGXPXRAX 705
GG G GG G G WG G G PG +GGG P
Sbjct: 501 GGPPPPGAGQGGGPPPPGAGQG---WGQPPPGAGQGG-----GPPPPGAGQGGGPPPPGA 552
Query: 704 XSSXGEPSXGGXXG 663
G+P G G
Sbjct: 553 GQGWGQPPPGAGQG 566
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 756 PPGXGFXXSPXXPXXGAPXXAPXXGARXXSXPPGPPA 866
PPG G P P G P GA PP P A
Sbjct: 505 PPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGA 541
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 756 PPGXGFXXSPXXPXXGAPXXAPXXGARXXSXPPGPPA 866
PPG G P P G P GA PP P A
Sbjct: 538 PPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGA 574
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = -2
Query: 821 GGXRWGPXXRXXGXXXETXTXGTXXPGXXEGGGXPXRAXXSSXGEPSXGGXXG 663
GG WG G G PG +GGG P G+P G G
Sbjct: 486 GGQGWGQPPPGAGQGG-----GPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQG 533
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Frame = +1
Query: 547 GCTRXGLPDRTGQXXEDPARSXDPTXPHL-----AXPPSXXRXRPXXPPXXGSP 693
G R PDRTG+ +P R P P PP R P PP SP
Sbjct: 676 GRDRPERPDRTGERGREP-RYSTPQGPDYHRRPSPSPPGPPRNAPYGPPRGRSP 728
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.3 bits (60), Expect = 8.7
Identities = 28/127 (22%), Positives = 39/127 (30%), Gaps = 4/127 (3%)
Frame = +3
Query: 495 PKGPTMXPLQXXPPC-ARWLYSAGAP*PDRPXGXR-PRPXIXPYGPSSSLXXFXVEXSAX 668
P P + PP ++ + + P P+ P P P I P P+ S+ S
Sbjct: 221 PPAPLHPHIPPAPPNPSKAIATPNPPMPETPLPPATPNPFIPPASPNPSIPPAPPNPSIP 280
Query: 669 XPPGRXLPXRTXXCPXRXSTXFXXXXXXXPPGXGFXXSPXXP--XXGAPXXAPXXGARXX 842
PP +P P PP +P P P +
Sbjct: 281 APPNPSIPLAPPN-PYIPPAPPNLFIPSAPPNPHIPPAPPNPYIPTAPPNPSIPPAPPNP 339
Query: 843 SXPPGPP 863
S PP PP
Sbjct: 340 SIPPAPP 346
>SB_9946| Best HMM Match : IQ (HMM E-Value=0.00018)
Length = 786
Score = 28.3 bits (60), Expect = 8.7
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +2
Query: 137 MADKYDKNGYNSGDFKRNTTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKI-KLNNSK 313
+A+ D + G+ + TQ EE+ Q E +K E+ R+ E++ K K
Sbjct: 310 LAESLDPIFFVLGNQSNSETQEDLEEMRQ--AEKVKRREEKARLARQAAIEELQKKREEK 367
Query: 314 FPLSMKLIDQEVTKVQASGRITK 382
+ + + E+ +QASG+++K
Sbjct: 368 KQENQRKAEDEMKFLQASGKVSK 390
>SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38)
Length = 2084
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 635 PXXLPGXDXGXXPPRXXAPPPNXPMPL 715
P LP + PP PPP+ PM L
Sbjct: 520 PPPLPAEEDNSPPPLPAGPPPDEPMEL 546
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.3 bits (60), Expect = 8.7
Identities = 23/89 (25%), Positives = 24/89 (26%), Gaps = 1/89 (1%)
Frame = +2
Query: 599 PPXHXTLRXLI*PXXLPGXDXGXXPPRXXAPPPNXPMPLXXXHXL-LXXXAPXSPXXGFX 775
PP L P P PP PPPN P P AP P
Sbjct: 151 PPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPP 210
Query: 776 XXXPXXXPRGPXGXPXXXXPXPFXTPRAP 862
P P P P P+ P P
Sbjct: 211 YPPPPNAPNPPYPPPPNAPNPPYPPPPNP 239
>SB_35468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 25.4 bits (53), Expect(2) = 8.8
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 408 VTNQPKSQLXXLCQLXNILNSTLWGKLLGPKGPTM 512
++NQ L LC+ NS ++G+ P+ P M
Sbjct: 5 LSNQIAKTLLELCEFYQARNSEIFGRPGSPRPPAM 39
Score = 21.4 bits (43), Expect(2) = 8.8
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = +3
Query: 597 PRPXIXPYGPSSSLXXFXVEXSAXXPPGR 683
PRP +G F + SA PGR
Sbjct: 34 PRPPAMAHGEQPVRPAFRMRPSANHEPGR 62
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,584,703
Number of Sequences: 59808
Number of extensions: 401563
Number of successful extensions: 1232
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2526446612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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