Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_B14
         (885 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.76 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   4.1  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.4  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 0.76
 Identities = 18/67 (26%), Positives = 20/67 (29%)
 Frame = -2

Query: 863 RGPGGXXXGAGXXXGGXRWGPXXRXXGXXXETXTXGTXXPGXXEGGGXPXRAXXSSXGEP 684
           R   G   G G   G   +    R      +         G   GGG P     SS G P
Sbjct: 164 RSSSGGGGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGG-P 222

Query: 683 SXGGXXG 663
             GG  G
Sbjct: 223 GPGGGGG 229


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +3

Query: 486 LLGPKGPTMXPLQXXPPCARWLYSAGAP*PDRPXGXRPRPXIXPYGP 626
           L+GP GP   P+    P    + + G P    P G   RP +    P
Sbjct: 102 LMGPNGPLPPPMMGMRPPPMMVPTMGMP----PMGLGMRPPVMSAAP 144


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 14/41 (34%), Positives = 14/41 (34%)
 Frame = -1

Query: 870 GXQGARGVXXGXGXXXXGXPXGPRGXXXGXXXXNPNXGDXG 748
           G QG  G     G      P GPRG   G      N G  G
Sbjct: 33  GEQGRTGAQGNAGPPGAPGPVGPRG-LTGHRGEKGNSGPVG 72


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,501
Number of Sequences: 2352
Number of extensions: 12581
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)