Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_B14
(885 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing ... 31 0.77
At5g19090.1 68418.m02269 heavy-metal-associated domain-containin... 31 0.77
At1g61080.1 68414.m06877 proline-rich family protein 31 0.77
At1g27750.1 68414.m03391 ubiquitin system component Cue domain-c... 31 1.0
At1g22400.1 68414.m02801 UDP-glucoronosyl/UDP-glucosyl transfera... 31 1.0
At3g22310.1 68416.m02818 DEAD box RNA helicase, putative (RH9) s... 31 1.3
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 31 1.3
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 30 1.8
At4g01985.1 68417.m00265 expressed protein 30 1.8
At2g38610.2 68415.m04743 KH domain-containing protein 30 1.8
At2g38610.1 68415.m04742 KH domain-containing protein 30 1.8
At5g56140.1 68418.m07003 KH domain-containing protein 30 2.3
At5g19810.1 68418.m02354 proline-rich extensin-like family prote... 30 2.3
At3g08620.1 68416.m01001 KH domain-containing protein 30 2.3
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 29 3.1
At3g24480.1 68416.m03070 leucine-rich repeat family protein / ex... 29 3.1
At1g22380.1 68414.m02799 UDP-glucoronosyl/UDP-glucosyl transfera... 29 3.1
At3g28270.2 68416.m03531 expressed protein similar to At14a prot... 29 4.1
At3g28270.1 68416.m03530 expressed protein similar to At14a prot... 29 4.1
At5g08230.1 68418.m00965 PWWP domain-containing protein putative... 29 5.4
At5g07760.1 68418.m00888 formin homology 2 domain-containing pro... 29 5.4
At5g52280.1 68418.m06488 protein transport protein-related low s... 28 7.2
At5g16720.1 68418.m01958 expressed protein contains Pfam profile... 28 7.2
At5g14540.1 68418.m01704 proline-rich family protein contains pr... 28 7.2
At3g04640.1 68416.m00497 glycine-rich protein predicted proteins... 28 7.2
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 28 9.5
At5g46730.1 68418.m05757 glycine-rich protein 28 9.5
At5g38560.1 68418.m04662 protein kinase family protein contains ... 28 9.5
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 28 9.5
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 28 9.5
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 28 9.5
>At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing
protein ribonucleoprotein, Xenopus laevis, PIR:S40778;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 423
Score = 31.5 bits (68), Expect = 0.77
Identities = 28/98 (28%), Positives = 29/98 (29%)
Frame = -2
Query: 860 GPGGXXXGAGXXXGGXRWGPXXRXXGXXXETXTXGTXXPGXXEGGGXPXRAXXSSXGEPS 681
G GG G G G G R G G G GG P S GEP
Sbjct: 276 GGGGYGGGVGPYRGEPALGYSGRYGGGGGGYNRGGYSMGGGGGYGGGPGDMYGGSYGEPG 335
Query: 680 XGGXXGRXLXXEGGQAR*GXVGSNXRAGSSSXWPVRSG 567
GG G GG G G G + R G
Sbjct: 336 -GGYGGPSGSYGGGYGSSGIGGYGGGMGGAGGGGYRGG 372
>At5g19090.1 68418.m02269 heavy-metal-associated domain-containing
protein contains Pfam heavy-metal-associated domain
PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
isoform contains a non-consensus TG-acceptor splice site
at intron 3
Length = 587
Score = 31.5 bits (68), Expect = 0.77
Identities = 26/103 (25%), Positives = 30/103 (29%)
Frame = -2
Query: 839 GAGXXXGGXRWGPXXRXXGXXXETXTXGTXXPGXXEGGGXPXRAXXSSXGEPSXGGXXGR 660
G G GG + GP G G G GGG P G G G
Sbjct: 314 GGGGGPGGKKGGPGG-GGGNMGNQNQGGGGKNGGKGGGGHPLDGKMGGGGGGPNGNKGGG 372
Query: 659 XLXXEGGQAR*GXVGSNXRAGSSSXWPVRSGSPXRVQPSCTGG 531
+ GG G G P+ G P +P GG
Sbjct: 373 GVQMNGGPN--GGKKGGGGGGGGGGGPMSGGLPPGFRPMGGGG 413
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 31.5 bits (68), Expect = 0.77
Identities = 27/100 (27%), Positives = 30/100 (30%)
Frame = +2
Query: 578 PAKXXKTPPXHXTLRXLI*PXXLPGXDXGXXPPRXXAPPPNXPMPLXXXHXLLXXXAPXS 757
P PP L+ P P P + APPP P PL + P
Sbjct: 474 PPPPPPLPPAVMPLKHFAPPPPTP---PAFKPLKGSAPPPPPPPPLPTT--IAAPPPPPP 528
Query: 758 PXXGFXXXXPXXXPRGPXGXPXXXXPXPFXTPRAPCXPXP 877
P P P G P P P T AP P P
Sbjct: 529 PPRAAVAPPPPPPPPGTAAAPPPPPPPP-GTQAAPPPPPP 567
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/96 (25%), Positives = 28/96 (29%), Gaps = 2/96 (2%)
Frame = +2
Query: 596 TPPXHXTLRXLI*PXXLPGXDXGXXPPRXXAPPPNXPMPLXXXHXLLXXXAPXSP--XXG 769
TPP + P P P + APPP P+P P +P
Sbjct: 443 TPPIADIAISMPPPPPPPPPPPAVMPLKHFAPPPPPPLPPAVMPLKHFAPPPPTPPAFKP 502
Query: 770 FXXXXPXXXPRGPXGXPXXXXPXPFXTPRAPCXPXP 877
P P P P P PRA P P
Sbjct: 503 LKGSAPPPPPPPPLPTTIAAPPPPPPPPRAAVAPPP 538
>At1g27750.1 68414.m03391 ubiquitin system component Cue
domain-containing protein very low similarity to ASC-1
complex subunit P100 [Homo sapiens] GI:12061187; contains
Pfam profile PF02845: CUE domain
Length = 1973
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +2
Query: 599 PPXHXTLRXLI*PXXLPGXDXGXXPPRXXAPPPN-XPMPLXXXHXLLXXXAPXSP 760
PP +L ++ P P PP PPP P PL H L P SP
Sbjct: 849 PPLGHSLPSVLQPPLQPQSQPPEPPPEMMPPPPQALPPPLPHSHPPLVPPPPFSP 903
>At1g22400.1 68414.m02801 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 489
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 143 DKYDKNGYNSGDFKRNTTQGKPEELDQNGEEGIKINEKAGEYMRELLSEK 292
D++D GD KR + EL +GE+G K+ EKA E+ R L+EK
Sbjct: 415 DEWDVGIEIGGDVKREEVEAVVREL-MDGEKGKKMREKAVEWQR--LAEK 461
>At3g22310.1 68416.m02818 DEAD box RNA helicase, putative (RH9)
similar to RNA helicases GI:3775995, GI:3775987
[Arabidopsis thaliana]; contains Pfam profiles PF00270:
DEAD/DEAH box helicase, PF00271: Helicase conserved
C-terminal domain
Length = 610
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/91 (28%), Positives = 29/91 (31%)
Frame = -2
Query: 863 RGPGGXXXGAGXXXGGXRWGPXXRXXGXXXETXTXGTXXPGXXEGGGXPXRAXXSSXGEP 684
RG G G GG G R G + + G GG + S G
Sbjct: 493 RGSASMFEGVGARSGGSFGG--GRSGGGGYGSYGSSSGRSGGGSYGGYGGSSGRSGGGGG 550
Query: 683 SXGGXXGRXLXXEGGQAR*GXVGSNXRAGSS 591
S GG G GG R GS GSS
Sbjct: 551 SYGGSGGSSSRYSGGSDRSSGFGSFGSGGSS 581
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/71 (30%), Positives = 25/71 (35%)
Frame = -2
Query: 884 GGXXXXRRGPGGXXXGAGXXXGGXRWGPXXRXXGXXXETXTXGTXXPGXXEGGGXPXRAX 705
GG G G G G GG G R G + G+ G GG R+
Sbjct: 532 GGSYGGYGGSSGRSGGGGGSYGGSG-GSSSRYSGGSDRSSGFGSFGSGGSSGGFGSDRSS 590
Query: 704 XSSXGEPSXGG 672
SS G S GG
Sbjct: 591 QSS-GRSSFGG 600
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/75 (29%), Positives = 24/75 (32%)
Frame = +1
Query: 598 PARSXDPTXPHLAXPPSXXRXRPXXPPXXGSPXELXXALXGXPPPSXXPGXXVPXVXVSX 777
P S P+ P P S P PP SP PPS P P +S
Sbjct: 49 PPSSLSPSSP---PPLSLSPSSPPPPPPSSSPLSSLSPSLSPSPPSSSPS-SAPPSSLSP 104
Query: 778 XXPXXLXXGPXRXPP 822
P L P PP
Sbjct: 105 SSPPPLSLSPSSPPP 119
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/93 (24%), Positives = 27/93 (29%)
Frame = +2
Query: 599 PPXHXTLRXLI*PXXLPGXDXGXXPPRXXAPPPNXPMPLXXXHXLLXXXAPXSPXXGFXX 778
PP + + P P P PPP P P +P
Sbjct: 77 PPPYTPKPPTVKPPPPPYVKPPPPPTVKPPPPPYVKPPPPPTVKPPPPPTPYTPPPPTPY 136
Query: 779 XXPXXXPRGPXGXPXXXXPXPFXTPRAPCXPXP 877
P + P P P P TP APC P P
Sbjct: 137 TPPPPTVKPPP-PPVVTPPPPTPTPEAPCPPPP 168
>At4g01985.1 68417.m00265 expressed protein
Length = 579
Score = 30.3 bits (65), Expect = 1.8
Identities = 33/121 (27%), Positives = 38/121 (31%), Gaps = 2/121 (1%)
Frame = -2
Query: 884 GGXXXXRRGPGGXXXGAGXXXGGXRWGPXXRXXGXXXETXTXGTXXPG--XXEGGGXPXR 711
GG R+G GG G G G G G G GGG R
Sbjct: 104 GGKGRGRKGGGGAGGGVGGGVGAGGGAGGSVGAGGGIGGGAGGAIGGGASGGVGGGGKGR 163
Query: 710 AXXSSXGEPSXGGXXGRXLXXEGGQAR*GXVGSNXRAGSSSXWPVRSGSPXRVQPSCTGG 531
S G GG G + GG G VG+ GS V +G S GG
Sbjct: 164 GGKSGGG---AGGGVGGGVGAGGGAG--GSVGAGGGIGSGGGGTVGAGGRGSGGASGGGG 218
Query: 530 S 528
+
Sbjct: 219 T 219
Score = 28.7 bits (61), Expect = 5.4
Identities = 26/106 (24%), Positives = 27/106 (25%)
Frame = -2
Query: 884 GGXXXXRRGPGGXXXGAGXXXGGXRWGPXXRXXGXXXETXTXGTXXPGXXEGGGXPXRAX 705
GG G GG G G G + GT G GG
Sbjct: 176 GGGVGAGGGAGGSVGAGGGIGSGGGGTVGAGGRGSGGASGGGGTVGAGGRGSGGASGGVG 235
Query: 704 XSSXGEPSXGGXXGRXLXXEGGQAR*GXVGSNXRAGSSSXWPVRSG 567
S GG G GG G G N AG V G
Sbjct: 236 VGGGAGGSGGGSVGGGGRGSGGVGASGGAGGNVGAGGGLGGGVGGG 281
Score = 28.3 bits (60), Expect = 7.2
Identities = 27/100 (27%), Positives = 28/100 (28%), Gaps = 2/100 (2%)
Frame = -2
Query: 884 GGXXXXRRGPGGXXXGAGXXXGGXRWGPXXRXXGXXXETXTXGTXXPGXXEGGGXPXRAX 705
GG G G GAG GG G G G GGG
Sbjct: 322 GGASGGASGGAGGSVGAGGGVGGGVGGGVGGGVGGGVGGAVGGAVGGAVGGGGGGSVGGG 381
Query: 704 XSSXGEPSXGGXXGRXLXXEGGQA--R*GXVGSNXRAGSS 591
G S G G GG + G VG AG S
Sbjct: 382 GRGSGGASGGASGGASGGASGGASGGASGGVGGAGGAGGS 421
>At2g38610.2 68415.m04743 KH domain-containing protein
Length = 286
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 449 IXEHPKFNFVGKTIRSKRTHYEXXTXXTPLCKMAVLGXGSLTGPAKXXK 595
+ +P FNFVG+ + R + T C++ + G GS+ P K K
Sbjct: 144 VDNYPNFNFVGRLL-GPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDK 191
>At2g38610.1 68415.m04742 KH domain-containing protein
Length = 286
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 449 IXEHPKFNFVGKTIRSKRTHYEXXTXXTPLCKMAVLGXGSLTGPAKXXK 595
+ +P FNFVG+ + R + T C++ + G GS+ P K K
Sbjct: 144 VDNYPNFNFVGRLL-GPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDK 191
>At5g56140.1 68418.m07003 KH domain-containing protein
Length = 315
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 449 IXEHPKFNFVGKTIRSKRTHYEXXTXXTPLCKMAVLGXGSLTGPAK 586
+ +P FNFVG+ + + + T C++ + G GS+ P K
Sbjct: 174 VDNYPNFNFVGRLLGPRGNSLKRVEASTD-CRVLIRGRGSIKDPIK 218
>At5g19810.1 68418.m02354 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 249
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/67 (29%), Positives = 23/67 (34%)
Frame = +1
Query: 607 SXDPTXPHLAXPPSXXRXRPXXPPXXGSPXELXXALXGXPPPSXXPGXXVPXVXVSXXXP 786
S P +L+ PP P PP SP L PPP P V +S P
Sbjct: 61 SPPPPPVNLSPPPPPVNLSPPPPPVNLSPPP-PPVLLSPPPPPVNLSPPPPPVNLSPPPP 119
Query: 787 XXLXXGP 807
L P
Sbjct: 120 PVLLSPP 126
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/67 (29%), Positives = 23/67 (34%)
Frame = +1
Query: 607 SXDPTXPHLAXPPSXXRXRPXXPPXXGSPXELXXALXGXPPPSXXPGXXVPXVXVSXXXP 786
S P +L+ PP P PP SP L PPP P V +S P
Sbjct: 97 SPPPPPVNLSPPPPPVNLSPPPPPVLLSPPP-PPVLLSPPPPPVNLSPPPPPVLLSPPPP 155
Query: 787 XXLXXGP 807
L P
Sbjct: 156 PVLFSPP 162
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/67 (29%), Positives = 23/67 (34%)
Frame = +1
Query: 607 SXDPTXPHLAXPPSXXRXRPXXPPXXGSPXELXXALXGXPPPSXXPGXXVPXVXVSXXXP 786
S P +L+ PP P PP SP L PPP P V +S P
Sbjct: 70 SPPPPPVNLSPPPPPVNLSPPPPPVLLSPPPPPVNL-SPPPPPVNLSPPPPPVLLSPPPP 128
Query: 787 XXLXXGP 807
L P
Sbjct: 129 PVLLSPP 135
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/71 (29%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Frame = +1
Query: 598 PARSXDPTXPH-LAXPPSXXRXRPXXPPXXGSPXELXXALXGXPPPSXXPGXXVPXVXVS 774
P P P L+ PP P PP SP L PPP P V +S
Sbjct: 84 PVNLSPPPPPVLLSPPPPPVNLSPPPPPVNLSPPP-PPVLLSPPPPPVLLSPPPPPVNLS 142
Query: 775 XXXPXXLXXGP 807
P L P
Sbjct: 143 PPPPPVLLSPP 153
>At3g08620.1 68416.m01001 KH domain-containing protein
Length = 283
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 449 IXEHPKFNFVGKTIRSKRTHYEXXTXXTPLCKMAVLGXGSLTGPAKXXK 595
+ +P FNFVG+ + R + T C++ + G GS+ P K K
Sbjct: 143 VDTYPNFNFVGRLL-GPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEK 190
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/70 (27%), Positives = 21/70 (30%), Gaps = 1/70 (1%)
Frame = +1
Query: 616 PTXPHLAXPPSXXRXRPXXPPXX-GSPXELXXALXGXPPPSXXPGXXVPXVXVSXXXPXX 792
P PH PP P PP SP PPP P P + S P
Sbjct: 575 PPPPHSPPPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPPPCIEPPPPPPCIEYSPPPPPP 634
Query: 793 LXXGPXRXPP 822
+ PP
Sbjct: 635 VVHYSSPPPP 644
>At3g24480.1 68416.m03070 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 494
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Frame = +1
Query: 598 PARSXDPTXPHLAXPPSXXRXRPXXPP--XXGSPXELXXALXGXPPPS-XXPGXXVPXVX 768
P S P+ P + PPS P PP SP PPPS G P +
Sbjct: 423 PVYSPPPSPPVFSPPPSPPVYSPPPPPSIHYSSPPPPPVHHSSPPPPSPEFEGPLPPVIG 482
Query: 769 VSXXXP 786
VS P
Sbjct: 483 VSYASP 488
>At1g22380.1 68414.m02799 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 467
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +2
Query: 173 GDFKRNTTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNNSKFPLSMKLIDQE 346
GD KR + EL +GE+G K+ EKA E+ R L+EK +K P +I+ E
Sbjct: 403 GDVKRGEVEAVVREL-MDGEKGKKMREKAVEWRR--LAEKA----TKLPCGSSVINFE 453
>At3g28270.2 68416.m03531 expressed protein similar to At14a protein
(GI:11994571 and GI:11994573) [Arabidopsis thaliana]
Length = 374
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +2
Query: 203 KPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITK 382
K EE++++ E+GIK NE+A E + L+ + L ID E + +T+
Sbjct: 276 KVEEIEESVEKGIKTNEEATETVSILVDGLEDRIKNMLKLVDNAIDHEDNEAATRIVLTQ 335
Query: 383 DSKYVD 400
SK V+
Sbjct: 336 ISKKVE 341
>At3g28270.1 68416.m03530 expressed protein similar to At14a protein
(GI:11994571 and GI:11994573) [Arabidopsis thaliana]
Length = 374
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +2
Query: 203 KPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQASGRITK 382
K EE++++ E+GIK NE+A E + L+ + L ID E + +T+
Sbjct: 276 KVEEIEESVEKGIKTNEEATETVSILVDGLEDRIKNMLKLVDNAIDHEDNEAATRIVLTQ 335
Query: 383 DSKYVD 400
SK V+
Sbjct: 336 ISKKVE 341
>At5g08230.1 68418.m00965 PWWP domain-containing protein putative
transcription factor (HUA2) - Arabidopsis thaliana,
EMBL:AF116556
Length = 1445
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +1
Query: 616 PTXPHLAXPPSXXRXRPXXPPXXGSPXELXXALXGXPPPS 735
P PH + PPS P PP SP +L A PPPS
Sbjct: 1126 PPLPHES-PPSPPPQPPSSPPPPSSPPQLAPA----PPPS 1160
>At5g07760.1 68418.m00888 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 853
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 598 PARSXDPTXPHLAXPPSXXRXRPXXPPXXGSPXELXXALXGXPPPS 735
P R P P PP R R PP P L PPP+
Sbjct: 16 PMRGRVPLPPPPPPPPPPMRRRAPLPPPPPPPMRRRAPLPPPPPPA 61
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +2
Query: 128 LIKMADKYDKN-GYNSGDFKRNTTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKLN 304
L++ A K +++ G +SG+ + +T + + E+LD + K NE+ + EL E L
Sbjct: 406 LLEEAKKLEEHKGMDSGNNEIDTLKQQIEDLDWELDSYKKKNEEQEILLDELTQEYESLK 465
Query: 305 NSKFP-LSMKLIDQEVTKVQASGRITKD 385
+ +S KL QE + + +KD
Sbjct: 466 EENYKNVSSKLEQQECSNAEDEYLDSKD 493
>At5g16720.1 68418.m01958 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 675
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 152 DKNGYNSGDFKRNTTQGKPEELDQNGEEGIKINEKAGEYMRELLSE 289
D+ Y G F+ +GK ++ QNGE I E G +RE+ E
Sbjct: 178 DRESYPLGFFRDKAEEGKKQDQQQNGEV-ISDVESYGLSLREVSEE 222
>At5g14540.1 68418.m01704 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 547
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Frame = +1
Query: 532 PPVQDGCTRXGLPDRTGQXXEDPA--RSXDPTXPHLAXPPSXXRXRPXXPPXXGSPXELX 705
PP Q + P + + P+ +P P + PP+ R P PP +P +
Sbjct: 326 PPYQPPPQQPQYPQQPPPQLQHPSGYNPEEPPYPQQSYPPNPPRQPPSHPPPGSAPSQQY 385
Query: 706 XALXGXPP 729
PP
Sbjct: 386 YNAPPTPP 393
>At3g04640.1 68416.m00497 glycine-rich protein predicted proteins,
Arabidopsis thaliana
Length = 159
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/68 (27%), Positives = 24/68 (35%)
Frame = -2
Query: 734 EGGGXPXRAXXSSXGEPSXGGXXGRXLXXEGGQAR*GXVGSNXRAGSSSXWPVRSGSPXR 555
+GGG R G G G GG + G GS+ R G P+ G R
Sbjct: 72 KGGGGGGRGGGGFGGGGRSFGGGGSSSRGGGGSSSRGGGGSSSRGGGLRPIPIYGGGTHR 131
Query: 554 VQPSCTGG 531
+GG
Sbjct: 132 SGHHSSGG 139
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/81 (27%), Positives = 24/81 (29%)
Frame = +2
Query: 635 PXXLPGXDXGXXPPRXXAPPPNXPMPLXXXHXLLXXXAPXSPXXGFXXXXPXXXPRGPXG 814
P +P PP PP+ P P H P SP P P P
Sbjct: 21 PSPVPPPPSHISPPPPPFSPPHHPPP---PHFSPPHQPPPSPYP-----HPHPPPPSPYP 72
Query: 815 XPXXXXPXPFXTPRAPCXPXP 877
P P P P P P P
Sbjct: 73 HPHQPPPPPHVLPPPPPTPAP 93
>At5g46730.1 68418.m05757 glycine-rich protein
Length = 290
Score = 27.9 bits (59), Expect = 9.5
Identities = 25/88 (28%), Positives = 26/88 (29%)
Frame = -2
Query: 860 GPGGXXXGAGXXXGGXRWGPXXRXXGXXXETXTXGTXXPGXXEGGGXPXRAXXSSXGEPS 681
G GG AG GG G G G G G G A S G +
Sbjct: 108 GGGGYGGAAGGHAGG---GGGGSGGGGGSAYGAGGEHASGYGNGAGEGGGAGASGYGGGA 164
Query: 680 XGGXXGRXLXXEGGQAR*GXVGSNXRAG 597
GG G GG A GS G
Sbjct: 165 YGGGGGHGGGGGGGSAGGAHGGSGYGGG 192
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/74 (24%), Positives = 21/74 (28%)
Frame = +1
Query: 598 PARSXDPTXPHLAXPPSXXRXRPXXPPXXGSPXELXXALXGXPPPSXXPGXXVPXVXVSX 777
P+ S P+ P + PP P P SP A PP P S
Sbjct: 66 PSSSPPPSPPVITSPPPTVASSPPPPVVIASPPPSTPATTPPAPPQTVSPPPPPDASPSP 125
Query: 778 XXPXXLXXGPXRXP 819
P P P
Sbjct: 126 PAPTTTNPPPKPSP 139
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/70 (25%), Positives = 20/70 (28%)
Frame = +2
Query: 662 GXXPPRXXAPPPNXPMPLXXXHXLLXXXAPXSPXXGFXXXXPXXXPRGPXGXPXXXXPXP 841
G PP PPP P P P P + P P P P P
Sbjct: 373 GCSPPSPPPPPPPPPPP-PPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPP 431
Query: 842 FXTPRAPCXP 871
+ P P P
Sbjct: 432 YVYPPPPSPP 441
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/78 (26%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
Frame = +1
Query: 595 DPARSXDPTXPHLAXPPSXXRXRPXXPPXXGSPXELXXALXG--XPPPSXXPGXXVPXVX 768
D A D + A PP P PP SP +L PP P +
Sbjct: 15 DSAPPPDTSSDGSAAPPPTDSAPPPSPPADSSPPPALPSLPPAVFSPPPTVSSPPPPPLD 74
Query: 769 VSXXXPXXLXXGPXRXPP 822
S P L P PP
Sbjct: 75 SSPPPPPDLTPPPSSPPP 92
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/69 (24%), Positives = 19/69 (27%)
Frame = +1
Query: 616 PTXPHLAXPPSXXRXRPXXPPXXGSPXELXXALXGXPPPSXXPGXXVPXVXVSXXXPXXL 795
P P + PP P P SP PPP P S P +
Sbjct: 459 PPPPSPSPPPPYVYSSPPPPYVYSSPPPPPYVYSSPPPPPYVYSSPPPPYVYSSPPPPYV 518
Query: 796 XXGPXRXPP 822
P PP
Sbjct: 519 YSSPPPPPP 527
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,026,875
Number of Sequences: 28952
Number of extensions: 292066
Number of successful extensions: 975
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2071520424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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