Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_B13
         (858 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75547-12|CAN99725.1|  141|Caenorhabditis elegans Hypothetical p...    30   1.8  
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ...    29   5.6  
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ...    28   7.4  
AC084156-1|AAK68491.2|  466|Caenorhabditis elegans Hypothetical ...    28   9.8  

>Z75547-12|CAN99725.1|  141|Caenorhabditis elegans Hypothetical
           protein K10C8.3b protein.
          Length = 141

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/59 (23%), Positives = 26/59 (44%)
 Frame = -3

Query: 379 RAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPHH 203
           R  S+ ++  +  +RP + R ++ P P       R RS +   + K +  V     P+H
Sbjct: 17  RKKSKSVKRCSSCKRPNSTRRSKTPDPNSEKEKVRNRSGSSSKKEKKNSLVNPNLQPNH 75


>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
           protein Y32B12B.4 protein.
          Length = 1528

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = -2

Query: 410 QPRPAPLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE 246
           +P  A LR  +  +      H GP     E+H  +E D  E LL G L D P  +
Sbjct: 238 EPPEAWLRDDKDVQSTSAASHSGPVAMKMEEHEETEEDFLE-LLNGTLDDVPDSD 291


>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
           protein Y47D3B.7 protein.
          Length = 1113

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = -2

Query: 362 HQDHHRGPAPRHSEKHSASEA-DRAERLLPGALRDAPSPE*TFSTCLVSTESTPFP 198
           +  HH+ P P H   H   +  +  E++   ++ DAP    T  T LV  +S   P
Sbjct: 220 YSQHHQSPPPHHHHHHPMPKIHENPEQVASPSIEDAPE---TKPTHLVEPQSPKSP 272


>AC084156-1|AAK68491.2|  466|Caenorhabditis elegans Hypothetical
           protein Y46E12BL.4 protein.
          Length = 466

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 18/49 (36%), Positives = 20/49 (40%)
 Frame = -2

Query: 404 RPAPLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDA 258
           R  PLR   S  Q H  H R P   HS  +      R E   P AL+ A
Sbjct: 306 RLPPLRPPPSSLQHHHHHRRSPPLFHSPVYKPKPRSRTES--PAALKAA 352


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,484,103
Number of Sequences: 27780
Number of extensions: 192709
Number of successful extensions: 721
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)