Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_B11
(851 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29362| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 4e-46
SB_31634| Best HMM Match : Peptidase_M2 (HMM E-Value=0) 164 9e-41
SB_53557| Best HMM Match : No HMM Matches (HMM E-Value=.) 143 2e-34
SB_6324| Best HMM Match : MCM (HMM E-Value=0) 136 2e-32
SB_43454| Best HMM Match : Peptidase_M2 (HMM E-Value=0.0041) 129 3e-30
SB_17710| Best HMM Match : Peptidase_M2 (HMM E-Value=8.8e-06) 104 1e-22
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 44 1e-04
SB_14754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_4564| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_10969| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_31642| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_21463| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_5433| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
>SB_29362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 587
Score = 182 bits (442), Expect = 4e-46
Identities = 83/163 (50%), Positives = 107/163 (65%)
Frame = +2
Query: 347 SLNLTAMPEKFWKNSIIEKPTDREIVCHASAWDFFDGEDFRIKQCTTVDYEYFQTTHHEM 526
S+ L A+P F++ S+I KP RE+ CHASAWDF D RIKQCTT+ + Y TTHHE+
Sbjct: 305 SIGLKALPMSFYEKSMIVKPEGREVQCHASAWDFKINRDVRIKQCTTITHNYLVTTHHEL 364
Query: 527 GHIQYYLQYRDQPVVFRDGANQGFHEAVGDTIALSVSSPKHLRRVGLATGDAEDEQTEIX 706
GHIQYYLQY DQP +R GAN GFHEAVGDT++LSV +P HL+ +GL + D +++I
Sbjct: 365 GHIQYYLQYWDQPFEYRTGANPGFHEAVGDTLSLSVDTPTHLKLIGLLDAVSNDSKSDIN 424
Query: 707 QLYKMGIDKIAFLPFAYXWTCSDTGVSXRKTLPENYXCHYWKL 835
L KM + K+AFLPF + V +NY +WKL
Sbjct: 425 ALMKMALRKVAFLPFGFLIDQWRWKVFSGDITSDNYNREWWKL 467
Score = 126 bits (304), Expect = 2e-29
Identities = 54/117 (46%), Positives = 78/117 (66%)
Frame = +1
Query: 7 GFDNVAEWWQSEYEVPDFEEQLAKLWEDVKPLYQQLHAYVRKRLRDKYGDKVVSARGPIP 186
G+ + EWW+S YE+ + E + L+ED++PLY++LHAYVR +L KY V GPIP
Sbjct: 194 GWADNGEWWRSWYEIDNLESSVEALYEDLRPLYEELHAYVRYKLSKKYSQ--VKPTGPIP 251
Query: 187 AHLLGNMWAQTWNNIESFTRPYPDKKEIDVTQAMRDQNYTPMKMFQMSDEFFXVVEL 357
AH+ GNMWAQ+W NI PY ++ +DVT+ M QNYT ++M Q+++ FF + L
Sbjct: 252 AHVFGNMWAQSWVNIYDIIEPYENQPSLDVTKTMVAQNYTQLRMVQLAESFFTSIGL 308
>SB_31634| Best HMM Match : Peptidase_M2 (HMM E-Value=0)
Length = 663
Score = 164 bits (398), Expect = 9e-41
Identities = 77/142 (54%), Positives = 99/142 (69%), Gaps = 5/142 (3%)
Frame = +2
Query: 347 SLNLTAMPEKFWKNSIIEKPTDREIVCHASAWDFFD----GE-DFRIKQCTTVDYEYFQT 511
S+ +P F+ S+ EKP DRE++CHA+A DFF+ GE D RIKQCT + ++
Sbjct: 307 SIGFEKLPGSFYSKSMFEKPEDREVLCHAAALDFFEKNSKGEKDVRIKQCTEITHQDLII 366
Query: 512 THHEMGHIQYYLQYRDQPVVFRDGANQGFHEAVGDTIALSVSSPKHLRRVGLATGDAEDE 691
THHEMGHI Y+L+Y DQP ++RDGAN FHEA+GDTIALSV +P+HL +V L ED+
Sbjct: 367 THHEMGHIYYFLKYWDQPYIYRDGANPAFHEALGDTIALSVDTPRHLVKVKLLDEYMEDK 426
Query: 692 QTEIXQLYKMGIDKIAFLPFAY 757
+ EI L KM + KIAFLPF Y
Sbjct: 427 EAEINALMKMALSKIAFLPFGY 448
Score = 123 bits (296), Expect = 2e-28
Identities = 59/137 (43%), Positives = 90/137 (65%), Gaps = 5/137 (3%)
Frame = +1
Query: 7 GFDNVAEWWQSEYEVPDFEEQLAKLWEDVKPLYQQLHAYVRKRLRDKYGDKVVSARGPIP 186
GF N+ E+ YE+P+ EE + +W+++K LY +LHAYVR+RL ++Y V+S++ IP
Sbjct: 196 GFQNMYEYQTHLYELPNLEEYIDGIWQELKVLYLELHAYVRQRLSEQY-PHVLSSQA-IP 253
Query: 187 AHLLGNMWAQTWNNIESFTRPYPDKKEIDVTQAMRDQNYTPMKMFQMSDEFFXVVELDR- 363
AHLLGNMWAQ W NI PY K +DVT+ +R QNYT +KM Q+++ FF + ++
Sbjct: 254 AHLLGNMWAQNWVNIYPLVEPYSGKPSLDVTKNLRQQNYTAVKMVQLAEAFFRSIGFEKL 313
Query: 364 ----YAREVLEELYNRE 402
Y++ + E+ +RE
Sbjct: 314 PGSFYSKSMFEKPEDRE 330
>SB_53557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1049
Score = 143 bits (346), Expect = 2e-34
Identities = 63/116 (54%), Positives = 81/116 (69%)
Frame = +2
Query: 320 FKCQTNSLXSLNLTAMPEKFWKNSIIEKPTDREIVCHASAWDFFDGEDFRIKQCTTVDYE 499
FK + S+ L MP+ FW S++ KP ++ +VCHASA+DF +D RIK CT + E
Sbjct: 435 FKLAQSFFVSIGLDPMPKSFWNKSMLRKPGNKSVVCHASAFDFLK-DDVRIKMCTRLKQE 493
Query: 500 YFQTTHHEMGHIQYYLQYRDQPVVFRDGANQGFHEAVGDTIALSVSSPKHLRRVGL 667
T HHEMGH +Y+L Y+DQP +R+GAN GFHEA+GDTIALSV +PKHL VGL
Sbjct: 494 DLITIHHEMGHCEYFLAYKDQPYAYRNGANPGFHEAIGDTIALSVVTPKHLNSVGL 549
Score = 128 bits (308), Expect = 7e-30
Identities = 59/119 (49%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Frame = +1
Query: 7 GFDNVAEWWQSEYEVP-DFEEQLAKLWEDVKPLYQQLHAYVRKRLRDKYGDKVVSARGPI 183
G + + + EYE+ DF + KLW DVKPLY++LHAYVR +L+ KY +S GPI
Sbjct: 332 GLGDYGHFERGEYEMGNDFTAVIKKLWTDVKPLYKELHAYVRFQLKKKYAG--MSGSGPI 389
Query: 184 PAHLLGNMWAQTWNNIESFTRPYPDKKEIDVTQAMRDQNYTPMKMFQMSDEFFXVVELD 360
PAHLLGNMWAQ W+ I +PYPD +DVT ++ Q+YTP KMF+++ FF + LD
Sbjct: 390 PAHLLGNMWAQNWDGIYDMVQPYPDATPLDVTPSLIKQHYTPEKMFKLAQSFFVSIGLD 448
>SB_6324| Best HMM Match : MCM (HMM E-Value=0)
Length = 1592
Score = 136 bits (329), Expect = 2e-32
Identities = 60/122 (49%), Positives = 82/122 (67%)
Frame = +2
Query: 470 IKQCTTVDYEYFQTTHHEMGHIQYYLQYRDQPVVFRDGANQGFHEAVGDTIALSVSSPKH 649
IKQCTT+ ++Y TTHHE+GHIQY+LQY QP +R GAN GFHEAVGDT++LSV +P H
Sbjct: 2 IKQCTTITHDYLVTTHHELGHIQYFLQYAHQPYEYRTGANPGFHEAVGDTLSLSVDTPAH 61
Query: 650 LRRVGLATGDAEDEQTEIXQLYKMGIDKIAFLPFAYXWTCSDTGVSXRKTLPENYXCHYW 829
L R+GL + + +++I L KM + K+AFLPF + V + P+NY +W
Sbjct: 62 LHRIGLLDAVSNNTESDINALMKMALSKVAFLPFGFLIDQWRWRVFRGEITPQNYNRKWW 121
Query: 830 KL 835
+L
Sbjct: 122 EL 123
>SB_43454| Best HMM Match : Peptidase_M2 (HMM E-Value=0.0041)
Length = 192
Score = 129 bits (311), Expect = 3e-30
Identities = 64/131 (48%), Positives = 80/131 (61%), Gaps = 24/131 (18%)
Frame = +2
Query: 347 SLNLTAMPEKFWKNSIIEKPTDREIVCHASAWDFFDGEDFR------------------- 469
S+ L +P+ F+ S+I KP DR +VCHASAWDF D R
Sbjct: 48 SIGLDPLPQSFYNRSMIVKPKDRGVVCHASAWDFLISRDVRYEIQGDYVVKRGRMIAVIV 107
Query: 470 -----IKQCTTVDYEYFQTTHHEMGHIQYYLQYRDQPVVFRDGANQGFHEAVGDTIALSV 634
IKQCTT+ ++ TTHHE+GHIQY+LQY QP +R GAN GFHEAVGDT++LSV
Sbjct: 108 TVMKVIKQCTTITHDSLVTTHHELGHIQYFLQYAHQPYEYRTGANPGFHEAVGDTLSLSV 167
Query: 635 SSPKHLRRVGL 667
+P HL R+GL
Sbjct: 168 DTPAHLHRIGL 178
Score = 55.6 bits (128), Expect = 5e-08
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 205 MWAQTWNNIESFTRPYPDKKEIDVTQAMRDQNYTPMKMFQMSDEFFXVVELD 360
MWAQ+W NI PY ++ +DVT+ M Q YT ++M Q+++ FF + LD
Sbjct: 1 MWAQSWANIYDLVEPYGNQSSLDVTRNMVKQGYTELRMVQLAESFFTSIGLD 52
>SB_17710| Best HMM Match : Peptidase_M2 (HMM E-Value=8.8e-06)
Length = 179
Score = 104 bits (249), Expect = 1e-22
Identities = 47/78 (60%), Positives = 58/78 (74%)
Frame = +2
Query: 524 MGHIQYYLQYRDQPVVFRDGANQGFHEAVGDTIALSVSSPKHLRRVGLATGDAEDEQTEI 703
MGHI Y+L+Y DQP ++RDGAN FHEA+GDTIALSV +P+HL +V L ED++ EI
Sbjct: 1 MGHIYYFLKYWDQPYIYRDGANPAFHEALGDTIALSVDTPRHLVKVKLLDEYMEDKEAEI 60
Query: 704 XQLYKMGIDKIAFLPFAY 757
L KM + KIAFLPF Y
Sbjct: 61 NALMKMALSKIAFLPFGY 78
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 7 GFDNVAEWWQSEYEVP-DFEEQLAKLWEDVKPLYQQLHAYV 126
G + + + EYE+ DF + KLW DVKPLY++LHAYV
Sbjct: 616 GLGDYGHFERGEYEMGNDFTAVIKKLWTDVKPLYKELHAYV 656
>SB_14754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 531 TSSTTCSTGINPLCSGTERTKVSTKRSGTR*LSRCRHRNICVGSVWPR 674
T++T+ S NP+ G +RT+V T + + S CRH ++ + V R
Sbjct: 2 TNTTSTSLHPNPIAEGYQRTEVVTDHAESE--STCRHASLALAVVLQR 47
>SB_4564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 205 MWAQTWNNIESFTRPYPDKKEIDVTQAMRDQNYTPMKMFQMSDEFFXVVELDRYARE 375
MW TW R P+ +++T DQ P+ + MS + + + EL R R+
Sbjct: 33 MWCSTWEKRSKILRLSPN--AVELTVLSMDQFAVPVLGYLMSTQSWPIAELQRIDRK 87
>SB_10969| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 846
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/88 (19%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 139 RDKYGDKVVSARGPIPAHLLGNMWAQTWNNIESFTRPYPDK-KEIDVTQAMRDQNYTPMK 315
RD YG+K + GP+ A L ++ + + + + D+ K+ ++ A++ + T
Sbjct: 389 RDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVRMYAQKFIDRGKDFNIELALKPKVITDGL 448
Query: 316 MFQMSDEFFXVVELDRYAREVLEELYNR 399
+ ++ + + AR + ++ NR
Sbjct: 449 RYSLATGNWGDQKKAHQARAGVSQVLNR 476
>SB_31642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 177 TDTGAFTGQHVGPDVEQHRILHSSLSGQEGDRRHTSD 287
T TG+ G+ + E + +HS+ + EGD++ S+
Sbjct: 23 TSTGSVEGEETAVNGESNLEIHSTYTNDEGDKKENSE 59
>SB_21463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +3
Query: 447 SLMVKILGSNS-ARQSITNTSRPPTTRWGTSSTTCSTGINPLCSGTERTKVSTKRSGTR* 623
S++ + GS + A SI NT+ P+ +W +SS S + T T + +S T+
Sbjct: 509 SILNSLEGSYATADHSIHNTAASPSRKWASSSDLISDQEKEKVTLTPVTPMKLSKSQTKE 568
Query: 624 LSRCRHRNICVGSVWPRAMPRTNR 695
L R H ++ W +++ R NR
Sbjct: 569 L-RDSHTSL---DDWKKSVKRGNR 588
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 718 LIKLXDLCLFVLGIARGQTDPTQMFR*RHRESYRVPDRFVET--LVRSVPEHN 566
++ L +LC ++ +AR DP ++F+ E+Y + +E L R E N
Sbjct: 910 IVLLQELCNMIIEMARTYLDPAEIFKSEIEEAYEKVKKAIENCMLFRDTFEEN 962
>SB_5433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +1
Query: 271 DVTQAMRDQNYTPMKMFQMSDEFFXVVELDR--YAREVLEELYNRE 402
D +A++D Y + + +D+ F VV +D+ Y +EVL +L ++E
Sbjct: 892 DERRALKDLRYAKDIVIKEADKGFGVVVMDKDKYIQEVLRQLSDKE 937
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,909,968
Number of Sequences: 59808
Number of extensions: 558540
Number of successful extensions: 1997
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1981
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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