Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_B05
         (852 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.3  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   7.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   7.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   7.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   7.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   7.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.4  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 384 TPEGSHHTQTTLRGHSIVHVCHRKFSKELQVQ 289
           T  G H  +  +R      VCH+KF+  L +Q
Sbjct: 180 THMGVHRAKPPMRVLHQCPVCHKKFTNALVLQ 211


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 632 LVNYRRNGKTVEAVCERL 579
           LV+Y +  KT+ A C R+
Sbjct: 174 LVDYMKKNKTLGAACGRI 191


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 632 LVNYRRNGKTVEAVCERL 579
           LV+Y +  KT+ A C R+
Sbjct: 488 LVDYMKKNKTLGAACGRI 505


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 632 LVNYRRNGKTVEAVCERL 579
           LV+Y +  KT+ A C R+
Sbjct: 721 LVDYMKKNKTLGAACGRI 738


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 632 LVNYRRNGKTVEAVCERL 579
           LV+Y +  KT+ A C R+
Sbjct: 721 LVDYMKKNKTLGAACGRI 738


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 510 CASINRIYGF 539
           C S+NRI+GF
Sbjct: 527 CDSVNRIFGF 536


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 405 LRGRDSWTPEGSHHTQTTLR 346
           +RG+D W  +G+  T+  L+
Sbjct: 461 VRGQDVWLGKGAEQTRQILK 480


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,393
Number of Sequences: 336
Number of extensions: 4653
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)