Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_B02
(854 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 23 4.1
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 5.4
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 22 5.4
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 9.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 9.4
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 9.4
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 9.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 9.4
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 21 9.4
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 302 HLRSGRGCPDCWCPPGASQLPPLQRV 379
HLR GRG + P ++ +P + V
Sbjct: 192 HLRKGRGAIGAYGPEKSASIPKKKEV 217
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 93 GVFTGPKNCDDY 58
G+F+ PKNC Y
Sbjct: 564 GIFSDPKNCAAY 575
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -3
Query: 432 NRQPDQRILQPNQHPSG*TLCKGGSWLAP 346
N PD ++P S TLC G ++P
Sbjct: 285 NGSPDVIKVEPELSDSEKTLCNGSKGISP 313
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 9.4
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +3
Query: 105 NKMAENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVV 284
+ + NPI+ + I SA Y K + SV I S+ PV+
Sbjct: 115 SSVGSRNPIHTSSYMTGIWVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSV-PVL 173
Query: 285 MAGIIAIYGL 314
++G+IA+ G+
Sbjct: 174 LSGLIAMCGM 183
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 669 RRPSLCASSDSDNEHRGS 616
RR S+ ASS D+ H G+
Sbjct: 1163 RRRSMSASSRGDHHHLGA 1180
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 669 RRPSLCASSDSDNEHRGS 616
RR S+ ASS D+ H G+
Sbjct: 1163 RRRSMSASSRGDHHHLGA 1180
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 9.4
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +3
Query: 105 NKMAENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVV 284
+ + NPI+ + I SA Y K + SV I S+ PV+
Sbjct: 348 SSVGSRNPIHTSSYMTGIWVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSV-PVL 406
Query: 285 MAGIIAIYGL 314
++G+IA+ G+
Sbjct: 407 LSGLIAMCGM 416
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 9.4
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +3
Query: 105 NKMAENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVV 284
+ + NPI+ + I SA Y K + SV I S+ PV+
Sbjct: 348 SSVGSRNPIHTSSYMTGIWVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSV-PVL 406
Query: 285 MAGIIAIYGL 314
++G+IA+ G+
Sbjct: 407 LSGLIAMCGM 416
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 669 RRPSLCASSDSDNEHRGS 616
RR S+ ASS D+ H G+
Sbjct: 1163 RRRSMSASSRGDHHHLGA 1180
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 669 RRPSLCASSDSDNEHRGS 616
RR S+ ASS D+ H G+
Sbjct: 1163 RRRSMSASSRGDHHHLGA 1180
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 21.4 bits (43), Expect = 9.4
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 705 APKPYAKXTRYRRRPSLCASSDSDNEHRGS 616
AP+ ++ T+ S +S+D D+E R S
Sbjct: 122 APRTASRETKSSESDSGASSADPDDELRSS 151
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,071
Number of Sequences: 336
Number of extensions: 5137
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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