Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_B01
(838 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 351 3e-97
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 348 3e-96
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 347 7e-96
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 345 2e-95
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 345 3e-95
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 345 3e-95
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 344 4e-95
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 343 7e-95
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 342 2e-94
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 173 9e-44
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 173 9e-44
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 172 3e-43
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 172 3e-43
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 171 4e-43
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 169 1e-42
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 169 1e-42
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 138 3e-33
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 138 6e-33
At4g37190.1 68417.m05265 expressed protein 34 0.13
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 2.9
At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)... 29 5.1
At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)... 29 5.1
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 28 8.8
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 28 8.8
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 351 bits (863), Expect = 3e-97
Identities = 164/221 (74%), Positives = 183/221 (82%), Gaps = 1/221 (0%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 265
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 266 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 445
VPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 446 VRKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVPDRIMNTYSVVPSPKVSDTV 625
VRKEAE+CDCLQG G + + PDR+M T+SV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 626 VEPYNATLSVHQFS*NPDETYCIDNEALYDICFRTLKLSPP 748
VEPYNATLSVHQ N DE +DNEALYDICFRTLKLS P
Sbjct: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTP 221
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 348 bits (855), Expect = 3e-96
Identities = 165/221 (74%), Positives = 181/221 (81%), Gaps = 1/221 (0%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 265
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 266 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 445
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 446 VRKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVPDRIMNTYSVVPSPKVSDTV 625
VRKEAE+CDCLQG G + + PDR+M T+SV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 626 VEPYNATLSVHQFS*NPDETYCIDNEALYDICFRTLKLSPP 748
VEPYNATLSVHQ N DE +DNEALYDICFRTLKLS P
Sbjct: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTP 221
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 347 bits (852), Expect = 7e-96
Identities = 162/220 (73%), Positives = 181/220 (82%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 268
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 269 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
PRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 449 RKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVPDRIMNTYSVVPSPKVSDTVV 628
RKEAE+CDCLQG G + + PDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 629 EPYNATLSVHQFS*NPDETYCIDNEALYDICFRTLKLSPP 748
EPYNATLSVHQ N DE +DNEALYDICFRTLKL+ P
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTP 220
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 345 bits (848), Expect = 2e-95
Identities = 164/220 (74%), Positives = 179/220 (81%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 268
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 269 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 449 RKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVPDRIMNTYSVVPSPKVSDTVV 628
RKEAE+CDCLQG G + + PDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 629 EPYNATLSVHQFS*NPDETYCIDNEALYDICFRTLKLSPP 748
EPYNATLSVHQ N DE +DNEALYDICFRTLKL+ P
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANP 220
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 345 bits (847), Expect = 3e-95
Identities = 162/220 (73%), Positives = 179/220 (81%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 268
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 269 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 449 RKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVPDRIMNTYSVVPSPKVSDTVV 628
RKEAE+CDCLQG G + + PDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 629 EPYNATLSVHQFS*NPDETYCIDNEALYDICFRTLKLSPP 748
EPYNATLSVHQ N DE +DNEALYDICFRTLKL+ P
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTP 220
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 345 bits (847), Expect = 3e-95
Identities = 162/220 (73%), Positives = 179/220 (81%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 268
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 269 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 449 RKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVPDRIMNTYSVVPSPKVSDTVV 628
RKEAE+CDCLQG G + + PDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 629 EPYNATLSVHQFS*NPDETYCIDNEALYDICFRTLKLSPP 748
EPYNATLSVHQ N DE +DNEALYDICFRTLKL+ P
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTP 220
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 344 bits (846), Expect = 4e-95
Identities = 162/220 (73%), Positives = 180/220 (81%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 268
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 269 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 449 RKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVPDRIMNTYSVVPSPKVSDTVV 628
RKEAE+CDCLQG G + + PDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 629 EPYNATLSVHQFS*NPDETYCIDNEALYDICFRTLKLSPP 748
EPYNATLSVHQ N DE +DNEALYDICFRTLKLS P
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTP 220
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 343 bits (844), Expect = 7e-95
Identities = 164/220 (74%), Positives = 179/220 (81%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 268
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 269 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 449 RKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVPDRIMNTYSVVPSPKVSDTVV 628
RKEAE+ DCLQG G + + PDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 629 EPYNATLSVHQFS*NPDETYCIDNEALYDICFRTLKLSPP 748
EPYNATLSVHQ N DE +DNEALYDICFRTLKL+ P
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANP 220
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 342 bits (841), Expect = 2e-94
Identities = 160/220 (72%), Positives = 179/220 (81%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 268
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 269 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 448
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 449 RKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVPDRIMNTYSVVPSPKVSDTVV 628
RKEAE+CDCLQG G + + PDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 629 EPYNATLSVHQFS*NPDETYCIDNEALYDICFRTLKLSPP 748
EPYNATLSVHQ N DE +DNEALYDICFRTLKL+ P
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTP 220
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 173 bits (422), Expect = 9e-44
Identities = 89/222 (40%), Positives = 125/222 (56%), Gaps = 2/222 (0%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 262
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 263 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 442
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 443 VVRKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVPDRIMNTYSVVPSPKVSDT 622
VRK A++C LQG G + + +++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 623 VVEPYNATLSVHQFS*NPDETYCIDNEALYDICFRTLKLSPP 748
VVEPYN+ LS H + D +DNEA+YDIC R+L + P
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERP 222
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 173 bits (422), Expect = 9e-44
Identities = 89/222 (40%), Positives = 125/222 (56%), Gaps = 2/222 (0%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 262
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 263 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 442
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 443 VVRKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVPDRIMNTYSVVPSPKVSDT 622
VRK A++C LQG G + + +++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 623 VVEPYNATLSVHQFS*NPDETYCIDNEALYDICFRTLKLSPP 748
VVEPYN+ LS H + D +DNEA+YDIC R+L + P
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERP 222
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 172 bits (418), Expect = 3e-43
Identities = 89/222 (40%), Positives = 125/222 (56%), Gaps = 2/222 (0%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 262
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 442
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 443 VVRKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVPDRIMNTYSVVPSPKVSDT 622
+RK A++C LQG G + + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 623 VVEPYNATLSVHQFS*NPDETYCIDNEALYDICFRTLKLSPP 748
VVEPYN+ LS H + D + +DNEA+YDIC R+L + P
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERP 222
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 172 bits (418), Expect = 3e-43
Identities = 89/222 (40%), Positives = 125/222 (56%), Gaps = 2/222 (0%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 262
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 442
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 443 VVRKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVPDRIMNTYSVVPSPKVSDT 622
+RK A++C LQG G + + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 623 VVEPYNATLSVHQFS*NPDETYCIDNEALYDICFRTLKLSPP 748
VVEPYN+ LS H + D + +DNEA+YDIC R+L + P
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERP 222
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 171 bits (417), Expect = 4e-43
Identities = 87/222 (39%), Positives = 126/222 (56%), Gaps = 2/222 (0%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 262
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 263 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 442
+VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 443 VVRKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVPDRIMNTYSVVPSPKVSDT 622
+RK A++C LQG G + + +++ PSP+VS
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTA 180
Query: 623 VVEPYNATLSVHQFS*NPDETYCIDNEALYDICFRTLKLSPP 748
VVEPYN+ LS H + D +DNEA+YDIC R+L + P
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERP 222
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 169 bits (412), Expect = 1e-42
Identities = 88/222 (39%), Positives = 124/222 (55%), Gaps = 2/222 (0%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 262
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 442
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 443 VVRKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVPDRIMNTYSVVPSPKVSDT 622
+RK A++C LQG G + + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 623 VVEPYNATLSVHQFS*NPDETYCIDNEALYDICFRTLKLSPP 748
VVEPYN+ LS H + D + +DNEA+YDIC R+L + P
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERP 222
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 169 bits (412), Expect = 1e-42
Identities = 88/222 (39%), Positives = 124/222 (55%), Gaps = 2/222 (0%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 262
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 263 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 442
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 443 VVRKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVPDRIMNTYSVVPSPKVSDT 622
+RK A++C LQG G + + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 623 VVEPYNATLSVHQFS*NPDETYCIDNEALYDICFRTLKLSPP 748
VVEPYN+ LS H + D + +DNEA+YDIC R+L + P
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERP 222
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 138 bits (335), Expect = 3e-33
Identities = 75/223 (33%), Positives = 125/223 (56%), Gaps = 4/223 (1%)
Frame = +2
Query: 92 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 271
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 272 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 445
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 446 VRKEAESCDCLQG-IPTDTLARRRHRFRYGHPPHLQNQRRVPDRIMNTYSVVPSP-KVSD 619
+ +EA+ D L+G + ++A + N R +++ TYSV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLND-RYSKKLVQTYSVFPNQMETSD 180
Query: 620 TVVEPYNATLSVHQFS*NPDETYCIDNEALYDICFRTLKLSPP 748
VV+PYN+ L++ + + N D +DN AL I L L+ P
Sbjct: 181 VVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNP 223
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 138 bits (333), Expect = 6e-33
Identities = 75/223 (33%), Positives = 125/223 (56%), Gaps = 4/223 (1%)
Frame = +2
Query: 92 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 271
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 272 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 445
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 446 VRKEAESCDCLQG-IPTDTLARRRHRFRYGHPPHLQNQRRVPDRIMNTYSVVPSP-KVSD 619
+ +EA+ D L+G + ++A + N R +++ TYSV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLND-RYSKKLVQTYSVFPNQMETSD 180
Query: 620 TVVEPYNATLSVHQFS*NPDETYCIDNEALYDICFRTLKLSPP 748
VV+PYN+ L++ + + N D +DN AL I L L+ P
Sbjct: 181 VVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNP 223
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 256
MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 257 GKYVPRAILVDLEP--GTMDS 313
Y PR + V+L+ GTM S
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +2
Query: 422 LVDSVLDVVRKEAESCDCLQ 481
+++SV VVRKEAE+C+CLQ
Sbjct: 1 MINSV-GVVRKEAENCNCLQ 19
>At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -1
Query: 394 GPVVAGAGLSEDEVVRTEDLSERSRADRVHG--AGLQVDEDGAGHVLAAGGF--IVVYID 227
GP G G +LSER R DR++ LQ V A + Y+
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 226 ALQLQVRVPMVGTG 185
+LQLQV++ + +G
Sbjct: 391 SLQLQVQIMSMASG 404
>At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -1
Query: 394 GPVVAGAGLSEDEVVRTEDLSERSRADRVHG--AGLQVDEDGAGHVLAAGGF--IVVYID 227
GP G G +LSER R DR++ LQ V A + Y+
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 226 ALQLQVRVPMVGTG 185
+LQLQV++ + +G
Sbjct: 391 SLQLQVQIMSMASG 404
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 428 DSVLDVVRKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVPD 571
+ V D ++A +QGIP D L R ++R +N VP+
Sbjct: 50 NKVADTTAEQARKGKDIQGIPWDRLNISREKYRQTRLEQYKNYENVPN 97
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -1
Query: 259 AAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 80
AAGGF + I + + ++ VP G VL+GD DL A L + FP +L
Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,187,808
Number of Sequences: 28952
Number of extensions: 329167
Number of successful extensions: 974
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1931371200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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