Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_A21
         (811 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        24   1.9  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    23   4.4  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    23   4.4  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    23   4.4  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    22   7.7  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   7.7  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = -3

Query: 617 LDFIRYFPFNG--VRFRYVYWVFDVFLDGKGNFLFDGVGLRYG 495
           L F++  P N   VR   VYW    F+  K    F+ V  +YG
Sbjct: 27  LGFVQSTPDNNKTVREFNVYWNVPTFMCHKYGLRFEEVSEKYG 69


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 644 QSQSAHSLHR*EENPLRSESAVP 712
           +  S HS+   EEN L SES  P
Sbjct: 79  EKDSIHSIDGDEENGLTSESTDP 101


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 19/76 (25%), Positives = 31/76 (40%)
 Frame = -3

Query: 764 KXRISLEXGPFSRQCRAGERHFHFVRDFLLNGVGSGHFDFDFVRLVNVDLDFIRYFPFNG 585
           + ++ L+    S+Q    +R+   +  F+      G   +    L NV    IRYFP   
Sbjct: 33  RVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANV----IRYFPTQA 88

Query: 584 VRFRYVYWVFDVFLDG 537
           + F +      VFL G
Sbjct: 89  LNFAFKDKYKQVFLGG 104


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 19/76 (25%), Positives = 31/76 (40%)
 Frame = -3

Query: 764 KXRISLEXGPFSRQCRAGERHFHFVRDFLLNGVGSGHFDFDFVRLVNVDLDFIRYFPFNG 585
           + ++ L+    S+Q    +R+   +  F+      G   +    L NV    IRYFP   
Sbjct: 33  RVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANV----IRYFPTQA 88

Query: 584 VRFRYVYWVFDVFLDG 537
           + F +      VFL G
Sbjct: 89  LNFAFKDKYKQVFLGG 104


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 599 FPFNGVRFRYVYWVFDV 549
           FP + + F  +YW+F V
Sbjct: 472 FPVSFMLFNAIYWIFYV 488


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 653 SAHSLHR*EENPLRSESAVP 712
           S HS+   EEN L SES  P
Sbjct: 111 SIHSIDGDEENGLTSESTDP 130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,021
Number of Sequences: 438
Number of extensions: 3746
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)