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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_A20
         (844 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    64   5e-12
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    62   2e-11
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    61   5e-11
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    60   6e-11
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           59   1e-10
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    58   4e-10
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    57   6e-10
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    56   2e-09
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    55   3e-09
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    51   4e-08
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    51   5e-08
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    48   4e-07
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    47   6e-07
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    45   3e-06
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    41   4e-05
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.94 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.9  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   3.8  
AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    24   5.0  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   5.0  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   6.7  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1049

 Score = 64.1 bits (149), Expect = 5e-12
 Identities = 35/120 (29%), Positives = 59/120 (49%)
 Frame = +3

Query: 279  VRAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPSEGVVRARRLH 458
            +R    YRT+S+EA C++A   P  +  E  + ++R         + R  E      +  
Sbjct: 852  MRVTSAYRTISYEAVCVIASMMPLCITLEEDSKNFR---------KSRAGESFTETAKKA 902

Query: 459  SRRSVLEAWSRRLADPSAGLRTVEAVRPVLADWVGRDHGCLTFRLTQMLTGHGCFGRYLH 638
            SR++ +  W    ++   G  T   + P +  W+ R HG + + +TQ+L+GHGCF  YLH
Sbjct: 903  SRQASMRQWQNEWSNSLNGRWTYLLI-PDVGAWLDRKHGDVDYFVTQVLSGHGCFRSYLH 961


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1022

 Score = 62.5 bits (145), Expect = 2e-11
 Identities = 40/119 (33%), Positives = 61/119 (51%)
 Frame = +3

Query: 282  RAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPSEGVVRARRLHS 461
            R I  +R+ S +AAC++AG  P  +    +  DYR R   RS   G  S    +  R+  
Sbjct: 801  RVISAFRSTSHDAACVIAGMMPLHI---LIDEDYRVRQ--RSITTGVSS----KLARIAE 851

Query: 462  RRSVLEAWSRRLADPSAGLRTVEAVRPVLADWVGRDHGCLTFRLTQMLTGHGCFGRYLH 638
            R   +EAW R  +  ++G  T   + P +  W+ R HG + F ++Q L+GHG F  +LH
Sbjct: 852  RPYSVEAWQREWSTTTSGSWTRRLI-PNIQPWITRRHGNIEFHMSQFLSGHGFFRSHLH 909


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 60.9 bits (141), Expect = 5e-11
 Identities = 40/121 (33%), Positives = 52/121 (42%), Gaps = 2/121 (1%)
 Frame = +3

Query: 279  VRAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPSEGVVRARRLH 458
            +R  R +RTV +E A LLAG  P       +  D R    L +       E +    R +
Sbjct: 876  IRVARAFRTVRYETATLLAGLVPI---CHLINEDARVHQQLLAPDRAATREDIRATERQN 932

Query: 459  SRRSVLEAWSRRLA--DPSAGLRTVEAVRPVLADWVGRDHGCLTFRLTQMLTGHGCFGRY 632
            +     E W       D S   R    V P + DW  R HG +TF L Q+L+GHG F  Y
Sbjct: 933  TIDCWQEEWDADALQQDASRHTRWTHRVIPSVGDWQSRKHGDMTFHLAQVLSGHGFFRDY 992

Query: 633  L 635
            L
Sbjct: 993  L 993


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 60.5 bits (140), Expect = 6e-11
 Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
 Frame = +3

Query: 279  VRAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPSEGVVRARRLH 458
            +R  R +RTV +E A LLAG  P  L  +  A  Y+ R    +R + R +       R  
Sbjct: 816  LRVARAFRTVRYETATLLAGLTPICLLLDEDARVYQ-RLSAVNRTDTRANI------RKQ 868

Query: 459  SRRSVLEAWSRRL---ADPSAGLRTVEAVRPVLADWVGRDHGCLTFRLTQMLTGHGCFGR 629
             R++ +E W ++    AD S   R    V P +  W  R HG ++F L Q+L+GHG F  
Sbjct: 869  ERQATIEQWQQQWDAEADTSRHTRWAHRVLPNIGSWQSRKHGDVSFHLCQVLSGHGFFRD 928

Query: 630  YL 635
            YL
Sbjct: 929  YL 930


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 59.3 bits (137), Expect = 1e-10
 Identities = 42/122 (34%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
 Frame = +3

Query: 282  RAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPSEGVVRAR-RLH 458
            R  R +RTV +E A LLAG  P  L  E  A  +   +D        P   + +A  RL 
Sbjct: 884  RVARTFRTVRYETATLLAGLTPICLLIEEDARVFERVND--------PGRSITKAAIRLE 935

Query: 459  SRRSVLEAWSRRL---ADPSAGLRTVEAVRPVLADWVGRDHGCLTFRLTQMLTGHGCFGR 629
             R+  +  W  +    AD S   R    +   ++ W GR HG +TF L Q+L+GHG F  
Sbjct: 936  ERQRTITMWQSQWDAEADTSRYTRWTHRIIRDISAWQGRRHGEMTFHLAQVLSGHGFFRE 995

Query: 630  YL 635
            YL
Sbjct: 996  YL 997


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
            protein.
          Length = 973

 Score = 57.6 bits (133), Expect = 4e-10
 Identities = 40/120 (33%), Positives = 58/120 (48%)
 Frame = +3

Query: 279  VRAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPSEGVVRARRLH 458
            +R +R Y+T+S  A C++A   P  L    LA D    S       G  + G+ R+    
Sbjct: 791  MRVVRAYKTISHVAVCVIASMVPICL---ILAEDSECCSF-----SGVSNAGLSRSS--- 839

Query: 459  SRRSVLEAWSRRLADPSAGLRTVEAVRPVLADWVGRDHGCLTFRLTQMLTGHGCFGRYLH 638
            +++  +  W     D S   RT  A+ P +A W  R HG + F +TQ L+ HGCF  YLH
Sbjct: 840  AKQLSMRKWQSEW-DCSTKGRTTHALIPNIAAWTSRKHGEVNFYMTQFLSDHGCFRSYLH 898


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 57.2 bits (132), Expect = 6e-10
 Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
 Frame = +3

Query: 279  VRAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPSEGVVRARRLH 458
            +R    ++TVS++AAC++A   P  L    +  D R + +  + G G  S+ + + +R  
Sbjct: 813  LRVASAFQTVSYDAACVVANTTPLVL---LMQEDIRCQDEKVASG-GVQSD-IRKRQREE 867

Query: 459  SRRSVLEAWSRRLADPSA-GLRTVEAVRPVLADWVGRDHGCLTFRLTQMLTGHGCFGRY 632
            + R   + W+     P A GL+T   + P +  WV R HG + F LTQ+LTGHG    Y
Sbjct: 868  TMRRWQDQWTTGAGQPGAPGLKTRRLI-PDINLWVSRKHGEVDFFLTQLLTGHGFLRSY 925


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 55.6 bits (128), Expect = 2e-09
 Identities = 41/122 (33%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
 Frame = +3

Query: 279  VRAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPSEGVVRARRLH 458
            +R  R +RTV +E A L AG  P      A+A D R  S    RG G  S  + +  R  
Sbjct: 831  IRVARTFRTVRYETAVLPAGLVPI---CRAVAEDTRVHS---RRGTGVSSSELRKEERQR 884

Query: 459  SRRSVLEAWSRRLADPSAG--LRTVEAVRPVLADWVGRDHGCLTFRLTQMLTGHGCFGRY 632
            +       W    A  +A   +R    V P +  W  R+HG +TF L+Q+L+GHG    Y
Sbjct: 885  TIEEWQTTWDADAAADNASRYVRWAHLVIPDVGAWQLRNHGEVTFHLSQVLSGHGFLREY 944

Query: 633  LH 638
            L+
Sbjct: 945  LN 946


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 54.8 bits (126), Expect = 3e-09
 Identities = 42/117 (35%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
 Frame = +3

Query: 291  RGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPSEGVVRARRLHSRRS 470
            R +RTV +E A LLAG  P  L   A+  D R  S    RG G     + R  R  S   
Sbjct: 896  RTFRTVRYETAVLLAGLLPICL---AIKEDTRVHS---RRGTGLNC-AIRREERQRSMEE 948

Query: 471  VLEAWSRRLADPSAG--LRTVEAVRPVLADWVGRDHGCLTFRLTQMLTGHGCFGRYL 635
                W    A+  A   +R    V P +  W  R HG +TF L+Q+L+GHG F  +L
Sbjct: 949  WQATWGADAANERASRYVRWAHRVIPDVGSWQSRKHGDVTFHLSQVLSGHGFFREHL 1005


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 51.2 bits (117), Expect = 4e-08
 Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
 Frame = +3

Query: 279  VRAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPSEGVVRAR-RL 455
            ++    + TV ++ A +LA   P  L  +  A  Y+ + +      G  S G++RA  R+
Sbjct: 837  IKVSSAFPTVRYQTAVVLASMIPICLLVQEDARCYQRQQE----AGGALSAGILRAEERI 892

Query: 456  HSRRSVLEAWSRRL--ADPSAGLRTVEAVRPVLADWVGRDHGCLTFRLTQMLTGHGCF 623
            ++ +S  E W      AD S  +R    V P +A W  R HG + F L+Q+L+GHG F
Sbjct: 893  NTMQSWQEEWDADASQADASRFVRWTHRVIPDIAAWHFRRHGEVNFHLSQVLSGHGFF 950


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 50.8 bits (116), Expect = 5e-08
 Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
 Frame = +3

Query: 303  TVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPSEGVVRARRLHSRRSVLEA 482
            +V++E    LAG  P+ L    +  D R    L +   G   + +    R  + +    A
Sbjct: 831  SVAYETGVALAGLVPFRL---LVREDARCHRRLLA-APGASRKDIRLEERQGTFQEWQRA 886

Query: 483  WSRRLADPSAGLRTVEAVR--PVLADWVGRDHGCLTFRLTQMLTGHGCFGRYLH 638
            W    A P+A    V A R  P L  W+ R HG + F L+Q+LTGHG F  YLH
Sbjct: 887  WDAAAAAPTASRYAVWAHRMIPDLHLWMSRRHGEVDFHLSQVLTGHGYFREYLH 940


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 48.0 bits (109), Expect = 4e-07
 Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 6/125 (4%)
 Frame = +3

Query: 279  VRAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPSEGVVRARRLH 458
            +   R +RTV +E A LLAG  P      A+  D R  S    RG    ++      R  
Sbjct: 836  IAVARTFRTVRYETAVLLAGLLPI---CRAICEDTRVHS---RRGTAAGAQ-----LRKE 884

Query: 459  SRRSVLEAWSRRLADPSAGLRTVEAVR------PVLADWVGRDHGCLTFRLTQMLTGHGC 620
             R + +  W       +AG +    VR      P +  W  R HG + F L+Q+++GHG 
Sbjct: 885  ERETTIAEWQATWDSDAAGHQASGYVRWAHRLIPDIGAWQSRKHGEVNFHLSQIISGHGF 944

Query: 621  FGRYL 635
            F +YL
Sbjct: 945  FRKYL 949


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1009

 Score = 47.2 bits (107), Expect = 6e-07
 Identities = 39/119 (32%), Positives = 54/119 (45%)
 Frame = +3

Query: 282  RAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPSEGVVRARRLHS 461
            R I  +RT S +A C+LAG  P  L       D   R+  R R E     G V AR +  
Sbjct: 796  RVISSFRTTSHDAVCVLAGMIPLHL-----LLDEDSRTFHRRRAEN--IAGSV-ARNME- 846

Query: 462  RRSVLEAWSRRLADPSAGLRTVEAVRPVLADWVGRDHGCLTFRLTQMLTGHGCFGRYLH 638
            R + +E W R   +   G  T   + P +  W+ R  G + F L+Q L+ HG +   LH
Sbjct: 847  RVTTMERWQREWDESVHGRWTYRLI-PDVNRWISRRFGGVDFFLSQFLSSHGFYAYQLH 904


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 44.8 bits (101), Expect = 3e-06
 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
 Frame = +3

Query: 297  YRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPSEGVVRARRLHSRRSVL 476
            + + S E A +LAG  P+ L A+  A  Y       +R +  P      A R   + + L
Sbjct: 832  FHSTSCEVAVVLAGELPYHLLAKEDARCY-------NRQQSSPDSSR-EAIRQEEKETSL 883

Query: 477  EAWSRRLADPSAG-----LRTVEAVRPVLADWVGRDHGCLTFRLTQMLTGHGCFGRYLH 638
            + W ++  D +A      LR      P +  W GR HG + F L+Q+L+GH     +LH
Sbjct: 884  QLWQQQWDDVAANNTSRYLRWAHRQVPDVRLWTGRKHGEVDFYLSQVLSGHAFVHEFLH 942


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 41.1 bits (92), Expect = 4e-05
 Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
 Frame = +3

Query: 282  RAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPSEGVVRARRLHS 461
            R + G+R++S+  A L+    P  L  +  A     R   R   +   S  V+R      
Sbjct: 821  RVVCGFRSISYSVAVLMPRLIPHPLLIKEDA-----RCHQRYLADPEASRAVIRREE--- 872

Query: 462  RRSVLEAWSRR----LADPSAG--LRTVEAVRPVLADWVGRDHGCLTFRLTQMLTGHGCF 623
            R   LE W R      ++P A    R    + P +  W+ +  G + F L Q+L+GH  F
Sbjct: 873  RAVTLEVWQREWDANASNPGASRYARWAHRLIPEVHSWMAQKRGEVDFLLAQILSGHRFF 932

Query: 624  GRYLH 638
              +LH
Sbjct: 933  REFLH 937


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 0.94
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +1

Query: 184 LMILVFCITIIK*VIG*CDLQRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHP 348
           L+IL  C++I+  +I      + C   S    S RSE  +P PS     SP   P
Sbjct: 323 LLILFLCVSILGTLITPELWMKNCKSCSISPVSDRSESVSPVPSLPVRSSPEPSP 377


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 5/66 (7%)
 Frame = -3

Query: 485 PRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQ-----VPGWRPGEQAR 321
           P++   P  V PPR+       P  P      PP +    +R Q     VPG +PG Q R
Sbjct: 189 PQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMP-MRPQMPPGAVPGMQPGMQPR 247

Query: 320 RLEGDG 303
                G
Sbjct: 248 PPSAQG 253


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 551 RENRADRLDGSEAGRRVCQAARPRLQHGPPRVEPPRSN 438
           R++R   +D ++   +  Q + P+     PR+ PP SN
Sbjct: 296 RDSRGGGVDAAKKQHQQQQRSSPQPPEKMPRLNPPSSN 333



 Score = 24.2 bits (50), Expect = 5.0
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +1

Query: 301 APSPSRRRACSPGRHPGTWRRRRSLPITGGVATSALGGKGA 423
           A + S+  +  P  HP T R   S PI   VATS+ GG G+
Sbjct: 732 ALTSSKSASTHPSPHPAT-RASPSSPI---VATSSSGGGGS 768


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
 Frame = -3

Query: 476 QHGPPRVEPPRSN-YTFAGAP---FPPRAEVATPP 384
           Q  PP V PPR+N  + A  P    PPRA+  + P
Sbjct: 636 QQQPPVVPPPRTNSQSQASEPTPALPPRADRDSKP 670


>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
           transaminase protein.
          Length = 396

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
 Frame = -3

Query: 371 ERLRLQVPG-W--RPGEQARRLEGDGAVSSDRPDRDRALRTSQRRCKSHYPMTYFI 213
           +R+ + V G W  R  E + R   D       PDR  +L T  R  + H P   F+
Sbjct: 94  DRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFL 149


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +3

Query: 357 EAEALAADYRWRSDLRSRGEGRPSEGVVRARRLHSRRSVLEA 482
           E +    + + +  L+ +   + +EG  R R L +R   LEA
Sbjct: 165 EVQQWFEELKEKRSLQEKSTNQGAEGTARVRELEARLEALEA 206


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +1

Query: 244 QRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRS 372
           +RRC  R+ R+    +      P+RR++   G+       RRS
Sbjct: 503 RRRCRPRARRNPPATTRPVRHRPTRRKSTKRGKKDDKGYDRRS 545


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,369
Number of Sequences: 2352
Number of extensions: 12689
Number of successful extensions: 54
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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