Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_A20
(844 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 54 2e-07
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 45 1e-04
AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA... 32 1.1
U78084-1|AAB53369.1| 527|Drosophila melanogaster presenilin pro... 31 1.5
AY094644-1|AAM10997.1| 421|Drosophila melanogaster AT09290p pro... 31 2.0
AE014297-1463|AAF54762.1| 421|Drosophila melanogaster CG10014-P... 31 2.0
U77934-1|AAB61139.1| 541|Drosophila melanogaster presenilin hom... 30 4.6
BT001591-1|AAN71346.1| 760|Drosophila melanogaster RE27138p pro... 30 4.6
AY071846-1|AAL60055.1| 760|Drosophila melanogaster hepatocyte g... 30 4.6
AY061316-1|AAL28864.1| 541|Drosophila melanogaster LD23505p pro... 30 4.6
AY051789-1|AAK93213.1| 760|Drosophila melanogaster LD30575p pro... 30 4.6
AF093402-2|AAD52708.1| 527|Drosophila melanogaster presenilin a... 30 4.6
AF093402-1|AAD52707.1| 541|Drosophila melanogaster presenilin a... 30 4.6
AF084184-2|AAC33128.1| 527|Drosophila melanogaster presenilin s... 30 4.6
AF084184-1|AAC33129.1| 541|Drosophila melanogaster presenilin l... 30 4.6
AF017024-1|AAD01610.1| 541|Drosophila melanogaster presenilin p... 30 4.6
AE014296-3364|AAN12132.1| 527|Drosophila melanogaster CG18803-P... 30 4.6
AE014296-3363|AAF51598.1| 541|Drosophila melanogaster CG18803-P... 30 4.6
AE014134-454|AAF51222.1| 647|Drosophila melanogaster CG2903-PA,... 30 4.6
AE014134-453|AAN10412.2| 760|Drosophila melanogaster CG2903-PC,... 30 4.6
AE014134-452|AAF51221.2| 760|Drosophila melanogaster CG2903-PB,... 30 4.6
AJ243904-1|CAB64937.1| 773|Drosophila melanogaster SF1 protein ... 29 6.0
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 29 8.0
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 54.0 bits (124), Expect = 2e-07
Identities = 37/119 (31%), Positives = 56/119 (47%)
Frame = +3
Query: 279 VRAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPSEGVVRARRLH 458
+R IRG+RT+S +AA L+G P DL+ +G+ SEG + L
Sbjct: 803 LRLIRGFRTISDDAAHALSGITPIDLDI---------------KGKYLASEGYTQ---LE 844
Query: 459 SRRSVLEAWSRRLADPSAGLRTVEAVRPVLADWVGRDHGCLTFRLTQMLTGHGCFGRYL 635
+ + W R + G T + + P L +W +H + + +TQ LT HGCF YL
Sbjct: 845 IKEWIRGVWQTRWQESQRGRWTYKLI-PQLTEWADCEHKTVDYHMTQFLTDHGCFRGYL 902
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 44.8 bits (101), Expect = 1e-04
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Frame = +3
Query: 300 RTVSFEAACLLAGAPPWDLEAEALAADYRWRSDL-RSRGEGRPSEGVV----RARRLHSR 464
RTVS A +L GAPP DL A+ LA Y+ + + E + R+
Sbjct: 828 RTVSTVALQVLGGAPPLDLAAKLLAIKYKLKRGFPLEENDWLYGEDIACLSWEQRKTRLE 887
Query: 465 RSVLEAWSRRLADPSAGLRTVEAVRPVLADWVGRDHGCLTFRLTQMLTGHGCFGRYLH 638
++++W R D S R P + + R + +LTGHG F +LH
Sbjct: 888 ECLIQSWQNRWDDDSEPGRVTHRFIPYVTLAYRDPSFGFSMRTSFLLTGHGSFNAFLH 945
>AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA
protein.
Length = 950
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 491 ARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATP 387
A P +GPP+ PP +Y GAP PP ++ P
Sbjct: 242 APPSASYGPPKSAPPSQSY---GAPAPPSSKYGPP 273
>U78084-1|AAB53369.1| 527|Drosophila melanogaster presenilin
protein.
Length = 527
Score = 31.5 bits (68), Expect = 1.5
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = -3
Query: 527 DGSEAGRRVCQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVP 348
D + G ++ A RL+ PPR + R+NY + P A +A P V+ E
Sbjct: 18 DDANVGSQI--GAAERLER-PPRRQQQRNNYGSSNQDQPDAAILAVPNVVMREPC----- 69
Query: 347 GWRPGEQARRLEGDGAVSSDRPDRDRALR-TSQRRCKSHYPMTYFIMVIQKT 195
G RP G G ++ + ++ L+ +Q K P++ ++V+ T
Sbjct: 70 GSRPSRLTGGRSGSGGPPTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVAT 121
>AY094644-1|AAM10997.1| 421|Drosophila melanogaster AT09290p
protein.
Length = 421
Score = 31.1 bits (67), Expect = 2.0
Identities = 25/92 (27%), Positives = 29/92 (31%)
Frame = -3
Query: 659 SVPSGYXMQVPAETTMAXKHLR*PEGEASVVAAHPVRENRADRLDGSEAGRRVCQAARPR 480
+VP PA + + PE A P E A EA A P
Sbjct: 308 TVPPSAPGTAPATARTSATAIAEPEAHEEAAEAQPAEEAPAAEAPADEA------APAPA 361
Query: 479 LQHGPPRVEPPRSNYTFAGAPFPPRAEVATPP 384
+ PP E AP PP E A PP
Sbjct: 362 EEAAPPPAEEAAPEAAEEPAPPPPPEEAAAPP 393
>AE014297-1463|AAF54762.1| 421|Drosophila melanogaster CG10014-PA
protein.
Length = 421
Score = 31.1 bits (67), Expect = 2.0
Identities = 25/92 (27%), Positives = 29/92 (31%)
Frame = -3
Query: 659 SVPSGYXMQVPAETTMAXKHLR*PEGEASVVAAHPVRENRADRLDGSEAGRRVCQAARPR 480
+VP PA + + PE A P E A EA A P
Sbjct: 308 TVPPSAPGTAPATARTSATAIAEPEAHEEAAEAQPAEEAPAAEAPADEA------APAPA 361
Query: 479 LQHGPPRVEPPRSNYTFAGAPFPPRAEVATPP 384
+ PP E AP PP E A PP
Sbjct: 362 EEAAPPPAEEAAPEAAEEPAPPPPPEEAAAPP 393
>U77934-1|AAB61139.1| 541|Drosophila melanogaster presenilin
homolog protein.
Length = 541
Score = 29.9 bits (64), Expect = 4.6
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = -3
Query: 527 DGSEAGRRVCQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVP 348
D + G ++ A RL+ PPR + R+NY + P A +A P V+ E
Sbjct: 18 DDANVGSQI--GAAERLER-PPRRQQQRNNYGSSNQDQPDAAILAVPNVVMREPC----- 69
Query: 347 GWRPGEQARRLEGDGAVSSDRPDRDRALR-TSQRRCKSHYPMTYFIMVIQKT 195
G RP G G ++ + ++ L+ +Q K P++ ++V+ T
Sbjct: 70 GSRPSRLTGGGGGSGGPPTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVAT 121
>BT001591-1|AAN71346.1| 760|Drosophila melanogaster RE27138p
protein.
Length = 760
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Frame = -3
Query: 470 GPPRVEPPRSNYTFAGAP-----FPPRAEVATPPVIGSERLRLQVPGWR----PGEQARR 318
G P++ PP FA P P + +A PP I + Q+PG + PG+Q ++
Sbjct: 613 GNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQIPGQQPQQIPGQQPQQ 672
Query: 317 LEG 309
+ G
Sbjct: 673 IPG 675
>AY071846-1|AAL60055.1| 760|Drosophila melanogaster hepatocyte
growth factor-regulatedtyrosine kinase substrate
protein.
Length = 760
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Frame = -3
Query: 470 GPPRVEPPRSNYTFAGAP-----FPPRAEVATPPVIGSERLRLQVPGWR----PGEQARR 318
G P++ PP FA P P + +A PP I + Q+PG + PG+Q ++
Sbjct: 613 GNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQIPGQQPQQIPGQQPQQ 672
Query: 317 LEG 309
+ G
Sbjct: 673 IPG 675
>AY061316-1|AAL28864.1| 541|Drosophila melanogaster LD23505p
protein.
Length = 541
Score = 29.9 bits (64), Expect = 4.6
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = -3
Query: 527 DGSEAGRRVCQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVP 348
D + G ++ A RL+ PPR + R+NY + P A +A P V+ E
Sbjct: 18 DDANVGSQI--GAAERLER-PPRRQQQRNNYGSSNQDQPDAAILAVPNVVMREPC----- 69
Query: 347 GWRPGEQARRLEGDGAVSSDRPDRDRALR-TSQRRCKSHYPMTYFIMVIQKT 195
G RP G G ++ + ++ L+ +Q K P++ ++V+ T
Sbjct: 70 GSRPSRLTGGGGGSGGPPTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVAT 121
>AY051789-1|AAK93213.1| 760|Drosophila melanogaster LD30575p
protein.
Length = 760
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Frame = -3
Query: 470 GPPRVEPPRSNYTFAGAP-----FPPRAEVATPPVIGSERLRLQVPGWR----PGEQARR 318
G P++ PP FA P P + +A PP I + Q+PG + PG+Q ++
Sbjct: 613 GNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQIPGQQPQQIPGQQPQQ 672
Query: 317 LEG 309
+ G
Sbjct: 673 IPG 675
>AF093402-2|AAD52708.1| 527|Drosophila melanogaster presenilin a1
protein.
Length = 527
Score = 29.9 bits (64), Expect = 4.6
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = -3
Query: 527 DGSEAGRRVCQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVP 348
D + G ++ A RL+ PPR + R+NY + P A +A P V+ E
Sbjct: 18 DDANVGSQI--GAAERLER-PPRRQQQRNNYGSSNQDQPDAAILAVPNVVMREPC----- 69
Query: 347 GWRPGEQARRLEGDGAVSSDRPDRDRALR-TSQRRCKSHYPMTYFIMVIQKT 195
G RP G G ++ + ++ L+ +Q K P++ ++V+ T
Sbjct: 70 GSRPSRLTGGGGGSGGPPTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVAT 121
>AF093402-1|AAD52707.1| 541|Drosophila melanogaster presenilin a2
protein.
Length = 541
Score = 29.9 bits (64), Expect = 4.6
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = -3
Query: 527 DGSEAGRRVCQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVP 348
D + G ++ A RL+ PPR + R+NY + P A +A P V+ E
Sbjct: 18 DDANVGSQI--GAAERLER-PPRRQQQRNNYGSSNQDQPDAAILAVPNVVMREPC----- 69
Query: 347 GWRPGEQARRLEGDGAVSSDRPDRDRALR-TSQRRCKSHYPMTYFIMVIQKT 195
G RP G G ++ + ++ L+ +Q K P++ ++V+ T
Sbjct: 70 GSRPSRLTGGGGGSGGPPTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVAT 121
>AF084184-2|AAC33128.1| 527|Drosophila melanogaster presenilin
short form protein.
Length = 527
Score = 29.9 bits (64), Expect = 4.6
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = -3
Query: 527 DGSEAGRRVCQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVP 348
D + G ++ A RL+ PPR + R+NY + P A +A P V+ E
Sbjct: 18 DDANVGSQI--GAAERLER-PPRRQQQRNNYGSSNQDQPDAAILAVPNVVMREPC----- 69
Query: 347 GWRPGEQARRLEGDGAVSSDRPDRDRALR-TSQRRCKSHYPMTYFIMVIQKT 195
G RP G G ++ + ++ L+ +Q K P++ ++V+ T
Sbjct: 70 GSRPSRLTGGGGGSGGPPTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVAT 121
>AF084184-1|AAC33129.1| 541|Drosophila melanogaster presenilin long
form protein.
Length = 541
Score = 29.9 bits (64), Expect = 4.6
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = -3
Query: 527 DGSEAGRRVCQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVP 348
D + G ++ A RL+ PPR + R+NY + P A +A P V+ E
Sbjct: 18 DDANVGSQI--GAAERLER-PPRRQQQRNNYGSSNQDQPDAAILAVPNVVMREPC----- 69
Query: 347 GWRPGEQARRLEGDGAVSSDRPDRDRALR-TSQRRCKSHYPMTYFIMVIQKT 195
G RP G G ++ + ++ L+ +Q K P++ ++V+ T
Sbjct: 70 GSRPSRLTGGGGGSGGPPTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVAT 121
>AF017024-1|AAD01610.1| 541|Drosophila melanogaster presenilin
protein.
Length = 541
Score = 29.9 bits (64), Expect = 4.6
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = -3
Query: 527 DGSEAGRRVCQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVP 348
D + G ++ A RL+ PPR + R+NY + P A +A P V+ E
Sbjct: 18 DDANVGSQI--GAAERLER-PPRRQQQRNNYGSSNQDQPDAAILAVPNVVMREPC----- 69
Query: 347 GWRPGEQARRLEGDGAVSSDRPDRDRALR-TSQRRCKSHYPMTYFIMVIQKT 195
G RP G G ++ + ++ L+ +Q K P++ ++V+ T
Sbjct: 70 GSRPSRLTGGGGGSGGPPTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVAT 121
>AE014296-3364|AAN12132.1| 527|Drosophila melanogaster CG18803-PB,
isoform B protein.
Length = 527
Score = 29.9 bits (64), Expect = 4.6
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = -3
Query: 527 DGSEAGRRVCQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVP 348
D + G ++ A RL+ PPR + R+NY + P A +A P V+ E
Sbjct: 18 DDANVGSQI--GAAERLER-PPRRQQQRNNYGSSNQDQPDAAILAVPNVVMREPC----- 69
Query: 347 GWRPGEQARRLEGDGAVSSDRPDRDRALR-TSQRRCKSHYPMTYFIMVIQKT 195
G RP G G ++ + ++ L+ +Q K P++ ++V+ T
Sbjct: 70 GSRPSRLTGGGGGSGGPPTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVAT 121
>AE014296-3363|AAF51598.1| 541|Drosophila melanogaster CG18803-PA,
isoform A protein.
Length = 541
Score = 29.9 bits (64), Expect = 4.6
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Frame = -3
Query: 527 DGSEAGRRVCQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVP 348
D + G ++ A RL+ PPR + R+NY + P A +A P V+ E
Sbjct: 18 DDANVGSQI--GAAERLER-PPRRQQQRNNYGSSNQDQPDAAILAVPNVVMREPC----- 69
Query: 347 GWRPGEQARRLEGDGAVSSDRPDRDRALR-TSQRRCKSHYPMTYFIMVIQKT 195
G RP G G ++ + ++ L+ +Q K P++ ++V+ T
Sbjct: 70 GSRPSRLTGGGGGSGGPPTNEMEEEQGLKYGAQHVIKLFVPVSLCMLVVVAT 121
>AE014134-454|AAF51222.1| 647|Drosophila melanogaster CG2903-PA,
isoform A protein.
Length = 647
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Frame = -3
Query: 470 GPPRVEPPRSNYTFAGAP-----FPPRAEVATPPVIGSERLRLQVPGWR----PGEQARR 318
G P++ PP FA P P + +A PP I + Q+PG + PG+Q ++
Sbjct: 500 GNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQIPGQQPQQIPGQQPQQ 559
Query: 317 LEG 309
+ G
Sbjct: 560 IPG 562
>AE014134-453|AAN10412.2| 760|Drosophila melanogaster CG2903-PC,
isoform C protein.
Length = 760
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Frame = -3
Query: 470 GPPRVEPPRSNYTFAGAP-----FPPRAEVATPPVIGSERLRLQVPGWR----PGEQARR 318
G P++ PP FA P P + +A PP I + Q+PG + PG+Q ++
Sbjct: 613 GNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQIPGQQPQQIPGQQPQQ 672
Query: 317 LEG 309
+ G
Sbjct: 673 IPG 675
>AE014134-452|AAF51221.2| 760|Drosophila melanogaster CG2903-PB,
isoform B protein.
Length = 760
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Frame = -3
Query: 470 GPPRVEPPRSNYTFAGAP-----FPPRAEVATPPVIGSERLRLQVPGWR----PGEQARR 318
G P++ PP FA P P + +A PP I + Q+PG + PG+Q ++
Sbjct: 613 GNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQIPGQQPQQIPGQQPQQ 672
Query: 317 LEG 309
+ G
Sbjct: 673 IPG 675
>AJ243904-1|CAB64937.1| 773|Drosophila melanogaster SF1 protein
protein.
Length = 773
Score = 29.5 bits (63), Expect = 6.0
Identities = 22/68 (32%), Positives = 27/68 (39%)
Frame = -3
Query: 524 GSEAGRRVCQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVPG 345
G E A P Q PP + PP + A P PP E PP+ G+ + P
Sbjct: 679 GMEHAMAAYVPAPPGTQ-APPPMPPPLMPWMSAPQPPPPATEPLNPPIPGTLPPLIPPP- 736
Query: 344 WRPGEQAR 321
PG AR
Sbjct: 737 --PGTSAR 742
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 29.1 bits (62), Expect = 8.0
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = -3
Query: 521 SEAGRRVCQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVPGW 342
S+A + V + ++ R +GPPR P SN A + P PP + +++P W
Sbjct: 444 SKAAQSVYEESKAR--NGPPRQPLPCSNNASARSATAPPGIAPLPP----QNTDVELPPW 497
Query: 341 RPGEQARR 318
+ Q+RR
Sbjct: 498 KIVPQSRR 505
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,312,521
Number of Sequences: 53049
Number of extensions: 611504
Number of successful extensions: 2459
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2455
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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