Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_A16
(849 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069160-1|AAL39305.1| 504|Drosophila melanogaster GH18717p pro... 157 2e-38
AF068257-1|AAC19117.1| 663|Drosophila melanogaster mutL homolog... 157 2e-38
AE013599-613|AAF59117.1| 664|Drosophila melanogaster CG11482-PA... 157 2e-38
AY069833-1|AAL39978.1| 895|Drosophila melanogaster SD07911p pro... 37 0.040
AF068271-1|AAC19245.1| 893|Drosophila melanogaster mutL homolog... 37 0.040
AE013599-2050|AAF58142.1| 899|Drosophila melanogaster CG8169-PA... 37 0.040
AY113477-1|AAM29482.1| 248|Drosophila melanogaster RE44143p pro... 32 1.1
AY060972-1|AAL28520.1| 327|Drosophila melanogaster GM10183p pro... 32 1.1
AY051830-1|AAK93254.1| 960|Drosophila melanogaster LD33689p pro... 32 1.1
AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L lon... 32 1.1
AF113847-1|AAD37500.1| 2151|Drosophila melanogaster kismet protein. 32 1.1
AE014298-1890|AAF48258.2| 387|Drosophila melanogaster CG15747-P... 32 1.1
AE014134-63|AAF51530.1| 2151|Drosophila melanogaster CG3696-PB, ... 32 1.1
AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA, ... 32 1.1
AE013599-2168|AAF58070.2| 960|Drosophila melanogaster CG8405-PA... 32 1.1
AE014296-1440|AAF50429.2| 1616|Drosophila melanogaster CG32356-P... 31 1.5
AY070540-1|AAL48011.1| 547|Drosophila melanogaster LD22520p pro... 31 2.0
AE014296-1040|AAN12235.1| 547|Drosophila melanogaster CG10480-P... 31 2.0
AE014296-1039|AAF50727.1| 547|Drosophila melanogaster CG10480-P... 31 2.0
AE014296-1038|AAF50726.1| 547|Drosophila melanogaster CG10480-P... 31 2.0
X58530-1|CAA41417.1| 547|Drosophila melanogaster BJ1 chromatin ... 29 6.1
AY121651-1|AAM51978.1| 866|Drosophila melanogaster LD47926p pro... 29 8.1
AY032609-1|AAK39641.1| 866|Drosophila melanogaster Zn finger tr... 29 8.1
AJ311850-1|CAC51080.1| 806|Drosophila melanogaster zinc finger ... 29 8.1
AE014297-3254|AAF56082.2| 692|Drosophila melanogaster CG4677-PA... 29 8.1
AE014297-3253|AAN13923.1| 866|Drosophila melanogaster CG4677-PB... 29 8.1
>AY069160-1|AAL39305.1| 504|Drosophila melanogaster GH18717p
protein.
Length = 504
Score = 157 bits (381), Expect = 2e-38
Identities = 76/141 (53%), Positives = 97/141 (68%)
Frame = +3
Query: 45 ITNVNYSNKKGILLLFINHRLVDSQAIRKAVDSVYSTYLPKNSHAFVYLSIELDPKNVDV 224
IT VNYS KK +LLFIN RLV+S A+R +VDS+Y+TYLP+ H FVY+S+ L P+N+DV
Sbjct: 88 ITQVNYSAKKCQMLLFINQRLVESTALRTSVDSIYATYLPRGHHPFVYMSLTLPPQNLDV 147
Query: 225 NVHPTKHEVQFLYEEQIVEKIKTCIETKLLGCSSTRVLYTQARLPGAAQPRDVADKPTDA 404
NVHPTKHEV FLY+E+IV+ IK +E +LLG ++TR Y Q RLPGA D
Sbjct: 148 NVHPTKHEVHFLYQEEIVDSIKQQVEARLLGSNATRTFYKQLRLPGAPD-LDETQLADKT 206
Query: 405 AKTSAAHMVRVNPNVQKIDKF 467
+ MVR + QK+DKF
Sbjct: 207 QRIYPKEMVRTDSTEQKLDKF 227
>AF068257-1|AAC19117.1| 663|Drosophila melanogaster mutL homolog
protein.
Length = 663
Score = 157 bits (381), Expect = 2e-38
Identities = 76/141 (53%), Positives = 97/141 (68%)
Frame = +3
Query: 45 ITNVNYSNKKGILLLFINHRLVDSQAIRKAVDSVYSTYLPKNSHAFVYLSIELDPKNVDV 224
IT VNYS KK +LLFIN RLV+S A+R +VDS+Y+TYLP+ H FVY+S+ L P+N+DV
Sbjct: 248 ITQVNYSAKKCQMLLFINQRLVESTALRTSVDSIYATYLPRGHHPFVYMSLTLPPQNLDV 307
Query: 225 NVHPTKHEVQFLYEEQIVEKIKTCIETKLLGCSSTRVLYTQARLPGAAQPRDVADKPTDA 404
NVHPTKHEV FLY+E+IV+ IK +E +LLG ++TR Y Q RLPGA D
Sbjct: 308 NVHPTKHEVHFLYQEEIVDSIKQQVEARLLGSNATRTFYKQLRLPGAPD-LDETQLADKT 366
Query: 405 AKTSAAHMVRVNPNVQKIDKF 467
+ MVR + QK+DKF
Sbjct: 367 QRIYPKEMVRTDSTEQKLDKF 387
>AE013599-613|AAF59117.1| 664|Drosophila melanogaster CG11482-PA
protein.
Length = 664
Score = 157 bits (381), Expect = 2e-38
Identities = 76/141 (53%), Positives = 97/141 (68%)
Frame = +3
Query: 45 ITNVNYSNKKGILLLFINHRLVDSQAIRKAVDSVYSTYLPKNSHAFVYLSIELDPKNVDV 224
IT VNYS KK +LLFIN RLV+S A+R +VDS+Y+TYLP+ H FVY+S+ L P+N+DV
Sbjct: 248 ITQVNYSAKKCQMLLFINQRLVESTALRTSVDSIYATYLPRGHHPFVYMSLTLPPQNLDV 307
Query: 225 NVHPTKHEVQFLYEEQIVEKIKTCIETKLLGCSSTRVLYTQARLPGAAQPRDVADKPTDA 404
NVHPTKHEV FLY+E+IV+ IK +E +LLG ++TR Y Q RLPGA D
Sbjct: 308 NVHPTKHEVHFLYQEEIVDSIKQQVEARLLGSNATRTFYKQLRLPGAPD-LDETQLADKT 366
Query: 405 AKTSAAHMVRVNPNVQKIDKF 467
+ MVR + QK+DKF
Sbjct: 367 QRIYPKEMVRTDSTEQKLDKF 387
>AY069833-1|AAL39978.1| 895|Drosophila melanogaster SD07911p
protein.
Length = 895
Score = 36.7 bits (81), Expect = 0.040
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +3
Query: 90 FINHRLVDSQAIRKAVDSVYSTYLPKNSHAFVYLSIELDPKNVDVNVHPTKHEVQFLYEE 269
F+N R D + I K ++ VY Y + F+YL+I +VDVN+ P K ++ E
Sbjct: 323 FVNSRPCDPKNIAKVMNEVYHRYNVQQQ-PFIYLNIITARSDVDVNLTPDKRQLLINNER 381
Query: 270 QIVEKIK 290
++ +K
Sbjct: 382 ILLLALK 388
>AF068271-1|AAC19245.1| 893|Drosophila melanogaster mutL homolog
PMS2 protein.
Length = 893
Score = 36.7 bits (81), Expect = 0.040
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +3
Query: 90 FINHRLVDSQAIRKAVDSVYSTYLPKNSHAFVYLSIELDPKNVDVNVHPTKHEVQFLYEE 269
F+N R D + I K ++ VY Y + F+YL+I +VDVN+ P K ++ E
Sbjct: 321 FVNSRPCDPKNIAKVMNEVYHRYNVQQQ-PFIYLNIITARSDVDVNLTPDKRQLLINNER 379
Query: 270 QIVEKIK 290
++ +K
Sbjct: 380 ILLLALK 386
>AE013599-2050|AAF58142.1| 899|Drosophila melanogaster CG8169-PA
protein.
Length = 899
Score = 36.7 bits (81), Expect = 0.040
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +3
Query: 90 FINHRLVDSQAIRKAVDSVYSTYLPKNSHAFVYLSIELDPKNVDVNVHPTKHEVQFLYEE 269
F+N R D + I K ++ VY Y + F+YL+I +VDVN+ P K ++ E
Sbjct: 323 FVNSRPCDPKNIAKVMNEVYHRYNVQQQ-PFIYLNIITARSDVDVNLTPDKRQLLINNER 381
Query: 270 QIVEKIK 290
++ +K
Sbjct: 382 ILLLALK 388
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 393 PTDAAKTSAAHMVRVNPNVQKIDKFFELEPNKTKQPTGDNASDVVNDVDQQQKIPSEQDL 572
P + + +V +QKI F E + + SD +DVD +K ++ L
Sbjct: 471 PVKRRCSESEELVTRTLKMQKIHTFLSQESPNEQSSKCEAESDAASDVDMAKKDKTQVSL 530
Query: 573 NNSI--VKEPAEDNKVQE 620
+NS +KE A++++ +
Sbjct: 531 DNSFLNLKELAKESEAYD 548
>AY113477-1|AAM29482.1| 248|Drosophila melanogaster RE44143p
protein.
Length = 248
Score = 31.9 bits (69), Expect = 1.1
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = +3
Query: 330 RVLYTQARLPGAAQPRDVADKPTDAAKTSAAHMVRVNPNVQKIDKFFELEPNKTKQPT-- 503
R LY Q +L G AQ +DV KP A T + K + P++ ++
Sbjct: 50 RHLYEQ-KLGGPAQ-QDVV-KPKTAPTTDEVAYKPIKAEAVKHRSYRRRRPSEDEEEQTK 106
Query: 504 --GDNASDVVNDVDQQQKIPSEQDLNNSI 584
D ASD DQ + IP++ L N+I
Sbjct: 107 SKSDAASDATKSTDQTESIPAQAHLTNNI 135
>AY060972-1|AAL28520.1| 327|Drosophila melanogaster GM10183p
protein.
Length = 327
Score = 31.9 bits (69), Expect = 1.1
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = +3
Query: 330 RVLYTQARLPGAAQPRDVADKPTDAAKTSAAHMVRVNPNVQKIDKFFELEPNKTKQPT-- 503
R LY Q +L G AQ +DV KP A T + K + P++ ++
Sbjct: 129 RHLYEQ-KLGGPAQ-QDVV-KPKTAPTTDEVAYKPIKAEAVKHRSYRRRRPSEDEEEQTK 185
Query: 504 --GDNASDVVNDVDQQQKIPSEQDLNNSI 584
D ASD DQ + IP++ L N+I
Sbjct: 186 SKSDAASDATKSTDQTESIPAQAHLTNNI 214
>AY051830-1|AAK93254.1| 960|Drosophila melanogaster LD33689p
protein.
Length = 960
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +3
Query: 498 PTGDNASDVVNDVDQQQKIPSEQDLNNSIVK--EPAEDNKVQEKWKQYTEAGQANITYVD 671
P ++A+DV + +Q +K P+ +N+++ E A+D QEK + +GQ N+ + D
Sbjct: 664 PAANDAADV--ETNQGRKQPTTSSINDAVATGAEGAQDKPGQEKVEVVENSGQENLQHGD 721
>AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L long
isoform protein.
Length = 5322
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 399 DAAKTSAAHMVRVNPNVQKIDKFFELEPNKTKQPTGDNASDVVNDVDQQQKIPSEQDLN- 575
D T+ + + + +P V I + + E + K T DN D +D ++ KI ++D N
Sbjct: 3475 DELMTNESVIKKESP-VTPIKEEIKSEESPEKHDTADNLEDKNSDAEESTKIKGKEDFNP 3533
Query: 576 NSIVKEPAEDNKVQEKWKQYTE 641
+ KE +++ K K TE
Sbjct: 3534 ETTEKEALDESTNLNKDKSSTE 3555
>AF113847-1|AAD37500.1| 2151|Drosophila melanogaster kismet protein.
Length = 2151
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 399 DAAKTSAAHMVRVNPNVQKIDKFFELEPNKTKQPTGDNASDVVNDVDQQQKIPSEQDLN- 575
D T+ + + + +P V I + + E + K T DN D +D ++ KI ++D N
Sbjct: 304 DELMTNESVIKKESP-VTPIKEEIKSEESPEKHDTADNLEDKNSDAEESTKIKGKEDFNP 362
Query: 576 NSIVKEPAEDNKVQEKWKQYTE 641
+ KE +++ K K TE
Sbjct: 363 ETTEKEALDESTNLNKDKSSTE 384
>AE014298-1890|AAF48258.2| 387|Drosophila melanogaster CG15747-PA
protein.
Length = 387
Score = 31.9 bits (69), Expect = 1.1
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = +3
Query: 330 RVLYTQARLPGAAQPRDVADKPTDAAKTSAAHMVRVNPNVQKIDKFFELEPNKTKQPT-- 503
R LY Q +L G AQ +DV KP A T + K + P++ ++
Sbjct: 189 RHLYEQ-KLGGPAQ-QDVV-KPKTAPTTDEVAYKPIKAEAVKHRSYRRRRPSEDEEEQTK 245
Query: 504 --GDNASDVVNDVDQQQKIPSEQDLNNSI 584
D ASD DQ + IP++ L N+I
Sbjct: 246 SKSDAASDATKSTDQTESIPAQAHLTNNI 274
>AE014134-63|AAF51530.1| 2151|Drosophila melanogaster CG3696-PB,
isoform B protein.
Length = 2151
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 399 DAAKTSAAHMVRVNPNVQKIDKFFELEPNKTKQPTGDNASDVVNDVDQQQKIPSEQDLN- 575
D T+ + + + +P V I + + E + K T DN D +D ++ KI ++D N
Sbjct: 304 DELMTNESVIKKESP-VTPIKEEIKSEESPEKHDTADNLEDKNSDAEESTKIKGKEDFNP 362
Query: 576 NSIVKEPAEDNKVQEKWKQYTE 641
+ KE +++ K K TE
Sbjct: 363 ETTEKEALDESTNLNKDKSSTE 384
>AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA,
isoform A protein.
Length = 5322
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 399 DAAKTSAAHMVRVNPNVQKIDKFFELEPNKTKQPTGDNASDVVNDVDQQQKIPSEQDLN- 575
D T+ + + + +P V I + + E + K T DN D +D ++ KI ++D N
Sbjct: 3475 DELMTNESVIKKESP-VTPIKEEIKSEESPEKHDTADNLEDKNSDAEESTKIKGKEDFNP 3533
Query: 576 NSIVKEPAEDNKVQEKWKQYTE 641
+ KE +++ K K TE
Sbjct: 3534 ETTEKEALDESTNLNKDKSSTE 3555
>AE013599-2168|AAF58070.2| 960|Drosophila melanogaster CG8405-PA
protein.
Length = 960
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +3
Query: 498 PTGDNASDVVNDVDQQQKIPSEQDLNNSIVK--EPAEDNKVQEKWKQYTEAGQANITYVD 671
P ++A+DV + +Q +K P+ +N+++ E A+D QEK + +GQ N+ + D
Sbjct: 664 PAANDAADV--ETNQGRKQPTTSSINDAVATGAEGAQDKPGQEKVEVVENSGQENLQHGD 721
>AE014296-1440|AAF50429.2| 1616|Drosophila melanogaster CG32356-PA,
isoform A protein.
Length = 1616
Score = 31.5 bits (68), Expect = 1.5
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Frame = +3
Query: 366 AQPRDVADKPTDAAKT---SAAHMVRVNPNVQKIDKFFELEPNKTKQPTGDNASDV-VND 533
A+P+ + P+ K A V P V ++ E EP +PT D S V +
Sbjct: 817 AEPQADLETPSATEKEIEPQTADHVEEEP-VAITERIQEAEPEPEIEPTNDEVSQVDADQ 875
Query: 534 VDQQQKIPSEQDLNNSIVKEPAEDNKVQEKWKQYTEAGQA 653
+ + I S+ D+ +EPA+ +V + + TEA ++
Sbjct: 876 AEPELPIKSDADIAEEAAEEPAQ-TEVAPEVETETEASES 914
>AY070540-1|AAL48011.1| 547|Drosophila melanogaster LD22520p
protein.
Length = 547
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 486 KTKQPTGDNASDVVNDVDQQQK---IPSEQDLNNSIVKEPAEDNKVQE 620
K K P DNA +VD+Q++ +P++ ++ +K P +D+ +E
Sbjct: 474 KNKTPPQDNADKEAENVDKQEQKENLPAKASTSSKKIKTPPQDDAAEE 521
>AE014296-1040|AAN12235.1| 547|Drosophila melanogaster CG10480-PC,
isoform C protein.
Length = 547
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 486 KTKQPTGDNASDVVNDVDQQQK---IPSEQDLNNSIVKEPAEDNKVQE 620
K K P DNA +VD+Q++ +P++ ++ +K P +D+ +E
Sbjct: 474 KNKTPPQDNADKEAENVDKQEQKENLPAKASTSSKKIKTPPQDDAAEE 521
>AE014296-1039|AAF50727.1| 547|Drosophila melanogaster CG10480-PB,
isoform B protein.
Length = 547
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 486 KTKQPTGDNASDVVNDVDQQQK---IPSEQDLNNSIVKEPAEDNKVQE 620
K K P DNA +VD+Q++ +P++ ++ +K P +D+ +E
Sbjct: 474 KNKTPPQDNADKEAENVDKQEQKENLPAKASTSSKKIKTPPQDDAAEE 521
>AE014296-1038|AAF50726.1| 547|Drosophila melanogaster CG10480-PA,
isoform A protein.
Length = 547
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 486 KTKQPTGDNASDVVNDVDQQQK---IPSEQDLNNSIVKEPAEDNKVQE 620
K K P DNA +VD+Q++ +P++ ++ +K P +D+ +E
Sbjct: 474 KNKTPPQDNADKEAENVDKQEQKENLPAKASTSSKKIKTPPQDDAAEE 521
>X58530-1|CAA41417.1| 547|Drosophila melanogaster BJ1 chromatin
binding protein protein.
Length = 547
Score = 29.5 bits (63), Expect = 6.1
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +3
Query: 486 KTKQPTGDNASDVVNDVDQQQK---IPSEQDLNNSIVKEPAEDNKVQE 620
K K P DNA + D+Q++ +P++ ++ +K P +D+ +E
Sbjct: 474 KNKTPPQDNADKEAENADKQEQKENLPAKASTSSKKIKTPPQDDAAEE 521
>AY121651-1|AAM51978.1| 866|Drosophila melanogaster LD47926p
protein.
Length = 866
Score = 29.1 bits (62), Expect = 8.1
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 516 SDVVNDVDQQQKIPSEQDLNNSIVKEPAEDNKVQEKWKQYTEAGQANITYVDPKDSFRL 692
SD N Q Q+ S+QD IV AE+ + + QYT+ + +I +P+D RL
Sbjct: 95 SDCHNYAGQDQQQDSDQD---DIVCAAAENTGMPYQQGQYTQLNREDIFRFEPEDIARL 150
>AY032609-1|AAK39641.1| 866|Drosophila melanogaster Zn finger
transcription factorlame duck protein.
Length = 866
Score = 29.1 bits (62), Expect = 8.1
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 516 SDVVNDVDQQQKIPSEQDLNNSIVKEPAEDNKVQEKWKQYTEAGQANITYVDPKDSFRL 692
SD N Q Q+ S+QD IV AE+ + + QYT+ + +I +P+D RL
Sbjct: 95 SDCHNYAGQDQQQDSDQD---DIVCAAAENTGMPYQQGQYTQLNREDIFRFEPEDIARL 150
>AJ311850-1|CAC51080.1| 806|Drosophila melanogaster zinc finger
transcription factor protein.
Length = 806
Score = 29.1 bits (62), Expect = 8.1
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 516 SDVVNDVDQQQKIPSEQDLNNSIVKEPAEDNKVQEKWKQYTEAGQANITYVDPKDSFRL 692
SD N Q Q+ S+QD IV AE+ + + QYT+ + +I +P+D RL
Sbjct: 95 SDCHNYAGQDQQQDSDQD---DIVCAAAENTGMPYQQGQYTQLNREDIFRFEPEDIARL 150
>AE014297-3254|AAF56082.2| 692|Drosophila melanogaster CG4677-PA,
isoform A protein.
Length = 692
Score = 29.1 bits (62), Expect = 8.1
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 516 SDVVNDVDQQQKIPSEQDLNNSIVKEPAEDNKVQEKWKQYTEAGQANITYVDPKDSFRL 692
SD N Q Q+ S+QD IV AE+ + + QYT+ + +I +P+D RL
Sbjct: 95 SDCHNYAGQDQQQDSDQD---DIVCAAAENTGMPYQQGQYTQLNREDIFRFEPEDIARL 150
>AE014297-3253|AAN13923.1| 866|Drosophila melanogaster CG4677-PB,
isoform B protein.
Length = 866
Score = 29.1 bits (62), Expect = 8.1
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 516 SDVVNDVDQQQKIPSEQDLNNSIVKEPAEDNKVQEKWKQYTEAGQANITYVDPKDSFRL 692
SD N Q Q+ S+QD IV AE+ + + QYT+ + +I +P+D RL
Sbjct: 95 SDCHNYAGQDQQQDSDQD---DIVCAAAENTGMPYQQGQYTQLNREDIFRFEPEDIARL 150
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,708,892
Number of Sequences: 53049
Number of extensions: 588711
Number of successful extensions: 2017
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2009
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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