Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_A16
(849 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92813-7|CAB07283.2| 758|Caenorhabditis elegans Hypothetical pr... 56 3e-08
U41540-5|AAK39229.2| 666|Caenorhabditis elegans Hypothetical pr... 34 0.11
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 32 0.59
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 32 0.59
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 32 0.59
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 32 0.59
AF026208-2|AAB71269.3| 774|Caenorhabditis elegans Prion-like-(q... 32 0.59
U55368-1|AAA97989.1| 168|Caenorhabditis elegans Hypothetical pr... 31 0.78
AF000299-7|AAC47982.1| 168|Caenorhabditis elegans Hypothetical ... 31 1.4
AF003383-3|ABO16467.1| 438|Caenorhabditis elegans Cyclophylin p... 29 5.5
AL132951-2|CAC44305.1| 561|Caenorhabditis elegans Hypothetical ... 28 9.6
AC024765-1|AAF60529.2| 300|Caenorhabditis elegans Prion-like-(q... 28 9.6
>Z92813-7|CAB07283.2| 758|Caenorhabditis elegans Hypothetical
protein T28A8.7 protein.
Length = 758
Score = 56.0 bits (129), Expect = 3e-08
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +3
Query: 57 NYSNKKGILLLFINHRLVDSQAIRKAVDSVYSTYLPKNSHA-FVYLSIELDPKNVDVNVH 233
N + +FIN R V ++ +D V + HA F L +++D +DVNVH
Sbjct: 254 NRKTSRSFFSVFINGRSVRCDILKHPIDEVLGA---RQLHAQFCALHLQIDETRIDVNVH 310
Query: 234 PTKHEVQFLYEEQIVEKIKTCIETKLLG 317
PTK+ V FL +E+I+E+I+ E K++G
Sbjct: 311 PTKNSVIFLEKEEIIEEIRAYFE-KVIG 337
>U41540-5|AAK39229.2| 666|Caenorhabditis elegans Hypothetical
protein F35H12.4 protein.
Length = 666
Score = 34.3 bits (75), Expect = 0.11
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 369 QPRDVADKPTDAAKTSAAHMVRVNPNVQKIDKFFELEPNKTKQPTGDNASDVVNDVDQQQ 548
QP D+ D PT +AK A + V N DK E+E T +PT D S + + +
Sbjct: 13 QP-DLTDVPTQSAKNLADGTIIVGEN-DTSDKEIEIEKEDTTKPTHDRQSWTMRLISSES 70
Query: 549 -KIPSEQDLNNSIVKEPA 599
P + NSI +P+
Sbjct: 71 FNAPMAVEYLNSIQDKPS 88
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 31.9 bits (69), Expect = 0.59
Identities = 22/95 (23%), Positives = 43/95 (45%)
Frame = +3
Query: 438 NPNVQKIDKFFELEPNKTKQPTGDNASDVVNDVDQQQKIPSEQDLNNSIVKEPAEDNKVQ 617
+P ++ + F L +K + T D A +V ++Q + + + +P K+
Sbjct: 16 SPGLEASARTFSLNASKMVRITDDYADEVF--IEQNDVVIEKPRM------DPLHVRKLM 67
Query: 618 EKWKQYTEAGQANITYVDPKDSFRLERFXTRG*KR 722
E W++ A +A Y+DP D F + + + KR
Sbjct: 68 ETWRK--AARRARTNYIDPWDEFNIHEYPVQRAKR 100
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 31.9 bits (69), Expect = 0.59
Identities = 22/95 (23%), Positives = 43/95 (45%)
Frame = +3
Query: 438 NPNVQKIDKFFELEPNKTKQPTGDNASDVVNDVDQQQKIPSEQDLNNSIVKEPAEDNKVQ 617
+P ++ + F L +K + T D A +V ++Q + + + +P K+
Sbjct: 16 SPGLEASARTFSLNASKMVRITDDYADEVF--IEQNDVVIEKPRM------DPLHVRKLM 67
Query: 618 EKWKQYTEAGQANITYVDPKDSFRLERFXTRG*KR 722
E W++ A +A Y+DP D F + + + KR
Sbjct: 68 ETWRK--AARRARTNYIDPWDEFNIHEYPVQRAKR 100
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 31.9 bits (69), Expect = 0.59
Identities = 22/95 (23%), Positives = 43/95 (45%)
Frame = +3
Query: 438 NPNVQKIDKFFELEPNKTKQPTGDNASDVVNDVDQQQKIPSEQDLNNSIVKEPAEDNKVQ 617
+P ++ + F L +K + T D A +V ++Q + + + +P K+
Sbjct: 16 SPGLEASARTFSLNASKMVRITDDYADEVF--IEQNDVVIEKPRM------DPLHVRKLM 67
Query: 618 EKWKQYTEAGQANITYVDPKDSFRLERFXTRG*KR 722
E W++ A +A Y+DP D F + + + KR
Sbjct: 68 ETWRK--AARRARTNYIDPWDEFNIHEYPVQRAKR 100
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 31.9 bits (69), Expect = 0.59
Identities = 22/95 (23%), Positives = 43/95 (45%)
Frame = +3
Query: 438 NPNVQKIDKFFELEPNKTKQPTGDNASDVVNDVDQQQKIPSEQDLNNSIVKEPAEDNKVQ 617
+P ++ + F L +K + T D A +V ++Q + + + +P K+
Sbjct: 16 SPGLEASARTFSLNASKMVRITDDYADEVF--IEQNDVVIEKPRM------DPLHVRKLM 67
Query: 618 EKWKQYTEAGQANITYVDPKDSFRLERFXTRG*KR 722
E W++ A +A Y+DP D F + + + KR
Sbjct: 68 ETWRK--AARRARTNYIDPWDEFNIHEYPVQRAKR 100
>AF026208-2|AAB71269.3| 774|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 40
protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.59
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +3
Query: 396 TDAAKTS--AAHMVRVNPNVQKIDKFFELEPNKTKQPTGDNASDVVNDVDQQQKI--PSE 563
TD K + A H + P V K+DK E+ K + + + ++V V+ + I P++
Sbjct: 264 TDELKRNVIATHGTKTQPIVPKLDKLVEV--LKKSKLSKEEIDEIVAQVEGNKNIEKPAK 321
Query: 564 QDLNNSIVKEPAEDNKVQEK 623
D N ++ P + N +++K
Sbjct: 322 YDFNAAVQNIPDKRNNIRQK 341
>U55368-1|AAA97989.1| 168|Caenorhabditis elegans Hypothetical
protein T08H10.3 protein.
Length = 168
Score = 31.5 bits (68), Expect = 0.78
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +3
Query: 363 AAQPRDVADKPTDAAKTSAAHMVRVNPNVQKIDKFFELEPNKTKQPTGDNASDVVNDVDQ 542
+A+P A KP T +A M +V + +K D + + TK P D + VDQ
Sbjct: 44 SAEPAKSAIKPPITDPTPSA-MAKVGSDEKKEDP--KDDKGDTKSPVPDGGAADAKPVDQ 100
Query: 543 QQK-IPSEQDLNNSIVKEPAEDNKVQEKWK 629
QK P + S K+ +N+V +K K
Sbjct: 101 SQKPFPKFEMPTESKKKKKMAENEVDKKEK 130
>AF000299-7|AAC47982.1| 168|Caenorhabditis elegans Hypothetical
protein E03H12.7 protein.
Length = 168
Score = 30.7 bits (66), Expect = 1.4
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Frame = +3
Query: 363 AAQPRDVADKPTDAAKTSAAHMVRVNPNVQKIDKFFELEPNKTKQPTGDNASDVVNDVDQ 542
+A+P A KP T +A + +V + +K + + K+ P GD A+ VDQ
Sbjct: 44 SAEPAKSAIKPPITDPTPSA-LAKVGSDEKKEEPKDDKGDTKSPAPDGDAAA--AKPVDQ 100
Query: 543 QQK-IPSEQDLNNSIVKEPAEDNKVQEKWKQ----YTEAGQANITYVDPKDSFRLER 698
QK P + S K+ +N+V +K K Y E + T ++ DS ++E+
Sbjct: 101 SQKPFPKFEMPTESKKKKKMAENEVDKKEKMKNGFYQEKSDEDDT-LEKVDSLKVEQ 156
>AF003383-3|ABO16467.1| 438|Caenorhabditis elegans Cyclophylin
protein 17 protein.
Length = 438
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 342 TQARLPGAAQPRDVADKPTDA-AKTSAAHMVRVNPNVQKIDKFFELEPNKTKQPTGDN 512
T++RL AA P V + + KT + ++N ++ +DK + + K+P G N
Sbjct: 35 TKSRLTPAATPNRVPQRANSSPGKTENLDVDKLNRLIRALDKTWIMPKAGAKEPVGSN 92
>AL132951-2|CAC44305.1| 561|Caenorhabditis elegans Hypothetical
protein Y67H2A.4a protein.
Length = 561
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 567 DLNNSIVKEPAEDNKVQEKWKQYTEAGQANITYVDPKDSFRLE 695
D N ++ KE E KVQ+ T GQ + ++ P SFR+E
Sbjct: 313 DGNGALDKE--EFTKVQQLIMSQTTVGQRHRDHITPNQSFRVE 353
>AC024765-1|AAF60529.2| 300|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 82
protein.
Length = 300
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +3
Query: 507 DNASDVVNDVDQQQKIPSEQDLNNSIVKEPAEDNKV----QEKWKQYTEAGQ 650
DN ++ N Q+IP+++ NS+ +EP + + Q++ KQ T GQ
Sbjct: 220 DNVENLENQATAAQQIPAKKPRWNSVEQEPEPEAPLEAVEQQQQKQPTTDGQ 271
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,892,419
Number of Sequences: 27780
Number of extensions: 299520
Number of successful extensions: 1052
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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