Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_A15
         (820 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    25   0.64 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.4  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 25.4 bits (53), Expect = 0.64
 Identities = 12/72 (16%), Positives = 34/72 (47%)
 Frame = +3

Query: 36  AGDTNGQDENGKIEETAPKKGRKKNVEEPPVENKSTDEPSVEDEVAVSEENNPSEDGSET 215
           A + N  ++N   +    + G ++N +    +NK       +++   + +N+  ++G+  
Sbjct: 437 ADNQNANNQNADNQNANKQNGNRQN-DNRQNDNKQNGNRQNDNKQNGNRQNDNKQNGNRQ 495

Query: 216 NGHIEEEQVPSG 251
           NG+ + +   +G
Sbjct: 496 NGNKQNDNKQNG 507


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
 Frame = +3

Query: 33  AAGDTNGQDENGKIEETAPKKGRKKNVEEPPVENKSTDEPS--VEDEVAVSEENNPSEDG 206
           A     G+ +NG+ +           + EP VE  S+  P+  +    + S  ++P   G
Sbjct: 474 AQAQLGGERQNGRKDSGYDGAASTAVIHEPVVETNSSPSPNPRIASAPSSSTSSSPPAKG 533

Query: 207 SETNG 221
           +   G
Sbjct: 534 AAAAG 538


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,863
Number of Sequences: 438
Number of extensions: 1801
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)