Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_A14
(843 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23648-3|AAN63386.1| 438|Caenorhabditis elegans Cyclin t protei... 84 1e-16
L23648-1|AAA28034.1| 468|Caenorhabditis elegans Cyclin t protei... 84 1e-16
Z83226-1|CAB05724.2| 252|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z78012-6|CAB01416.1| 480|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AY557405-1|AAS64750.1| 480|Caenorhabditis elegans cyclin L prot... 60 2e-09
L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protei... 58 1e-08
L23648-5|AAN63385.1| 381|Caenorhabditis elegans Cyclin t protei... 34 0.15
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 29 3.1
AB009362-1|BAA23766.1| 118|Caenorhabditis elegans protein ( Cae... 29 3.1
U41993-8|AAA83449.1| 497|Caenorhabditis elegans Temporarily ass... 29 5.5
U41993-7|AAA83450.2| 733|Caenorhabditis elegans Temporarily ass... 29 5.5
Z93383-3|CAB07625.1| 309|Caenorhabditis elegans Hypothetical pr... 28 9.5
U64853-3|AAB04976.1| 565|Caenorhabditis elegans Hypothetical pr... 28 9.5
>L23648-3|AAN63386.1| 438|Caenorhabditis elegans Cyclin t protein
1.1, isoform b protein.
Length = 438
Score = 84.2 bits (199), Expect = 1e-16
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Frame = +2
Query: 32 KWYFTKEQLQNSPSRKCGLDADKELAYRQQAANLIQDM--------GQRLQVSQLCINTA 187
KW FTKE+++ + S + G+ ++ELA RQ AA IQ+M ++++ + A
Sbjct: 19 KWLFTKEEMKKTASIQEGMSREEELASRQMAAAFIQEMIDGLNNVKDPKMKIGHTGLCVA 78
Query: 188 IVYMHRFYAFHSFTQFHRNXXXXXXXXXXXKVEEQPRKLEYVIKVAHVCLHRGEGVNALT 367
+MHRFY HSF ++ K +E PRKL +VI V R + T
Sbjct: 79 HTHMHRFYYLHSFKKYDYRDVGAACVFLAGKSQECPRKLSHVISVWR---ERKDRKQLTT 135
Query: 368 PEQYQEQAQDLVFNENVLLQTLGFDVAIDHPHTHVV 475
E AQ +V E+++LQT+ FD+ + PH +V+
Sbjct: 136 ETARNEAAQIIVLLESMILQTIAFDLNVHLPHIYVL 171
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/78 (20%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +3
Query: 471 LCERVTLXKATKDLAQTSYFMASNSLHLTTMCLQYXPTVVACFCIHLASKWSNWLIPQSY 650
+ ++V + + L +Y+ A++ + +T L+Y ++ IHL + ++N I + +
Sbjct: 173 IMKKVDKKEHYRPLTSCAYYFATDVIAVTDWSLRYSAASMSIVIIHLMAAYANVRIERLF 232
Query: 651 -----EGRHWFSYVDKTV 689
E W++ D+T+
Sbjct: 233 ADFINEDSPWYAKFDETM 250
>L23648-1|AAA28034.1| 468|Caenorhabditis elegans Cyclin t protein
1.1, isoform a protein.
Length = 468
Score = 84.2 bits (199), Expect = 1e-16
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Frame = +2
Query: 32 KWYFTKEQLQNSPSRKCGLDADKELAYRQQAANLIQDM--------GQRLQVSQLCINTA 187
KW FTKE+++ + S + G+ ++ELA RQ AA IQ+M ++++ + A
Sbjct: 19 KWLFTKEEMKKTASIQEGMSREEELASRQMAAAFIQEMIDGLNNVKDPKMKIGHTGLCVA 78
Query: 188 IVYMHRFYAFHSFTQFHRNXXXXXXXXXXXKVEEQPRKLEYVIKVAHVCLHRGEGVNALT 367
+MHRFY HSF ++ K +E PRKL +VI V R + T
Sbjct: 79 HTHMHRFYYLHSFKKYDYRDVGAACVFLAGKSQECPRKLSHVISVWR---ERKDRKQLTT 135
Query: 368 PEQYQEQAQDLVFNENVLLQTLGFDVAIDHPHTHVV 475
E AQ +V E+++LQT+ FD+ + PH +V+
Sbjct: 136 ETARNEAAQIIVLLESMILQTIAFDLNVHLPHIYVL 171
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/78 (20%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +3
Query: 471 LCERVTLXKATKDLAQTSYFMASNSLHLTTMCLQYXPTVVACFCIHLASKWSNWLIPQSY 650
+ ++V + + L +Y+ A++ + +T L+Y ++ IHL + ++N I + +
Sbjct: 173 IMKKVDKKEHYRPLTSCAYYFATDVIAVTDWSLRYSAASMSIVIIHLMAAYANVRIERLF 232
Query: 651 -----EGRHWFSYVDKTV 689
E W++ D+T+
Sbjct: 233 ADFINEDSPWYAKFDETM 250
>Z83226-1|CAB05724.2| 252|Caenorhabditis elegans Hypothetical
protein F43D2.1 protein.
Length = 252
Score = 73.3 bits (172), Expect = 2e-13
Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Frame = +2
Query: 35 WYFTKEQLQNSPSRKCGLDADKELAYRQQAANLIQDMGQRLQVS-QLCINTAIVYMHRFY 211
W + E L+ +PS + GL ++EL +R++ L+ ++G L + I A VY HRFY
Sbjct: 4 WIWPLEALKTTPSIRAGLTKEQELLWRREGIKLLSEVGNALNCKPRPTIGVAAVYFHRFY 63
Query: 212 AFHSFTQFHRNXXXXXXXXXXXKVEEQPRKLEYVIKVAHVCLHRGEGVNALTPEQYQEQA 391
HSF F R KVE+ P+K + V + A H E +YQ
Sbjct: 64 MIHSFQSFSREVTALSCLFLAGKVEDFPKKCKDVCQAA--VTHYPE-----IYSKYQNLV 116
Query: 392 QDLVFNENVLLQTLGFDVAIDHPH 463
D++ E VLL +L FD+ + P+
Sbjct: 117 DDVMGLERVLLHSLKFDLHVALPY 140
>Z78012-6|CAB01416.1| 480|Caenorhabditis elegans Hypothetical
protein C52E4.6a protein.
Length = 480
Score = 60.1 bits (139), Expect = 2e-09
Identities = 49/173 (28%), Positives = 70/173 (40%), Gaps = 20/173 (11%)
Frame = +2
Query: 29 EKWYFTKEQ-----LQNSPSRKCGLDADKELAYRQQAANLIQDMGQRLQVSQLCINTAIV 193
+KW T ++ + N PS GL + E R LIQ L++ Q T +
Sbjct: 73 DKWLMTLDEESRLKIDNPPSLVDGLSKETESELRYLGCELIQQGAILLKLPQTAAATGQI 132
Query: 194 YMHRFYAFHSFTQFHRNXXXXXXXXXXXKVEEQPRKLEYVIKVAHVC--LHR----GEGV 355
R+Y SF ++H K+EE+PR+ V V H LHR G +
Sbjct: 133 LFQRYYYQKSFVRYHFEHAVQACLLLASKIEEEPRRPREVYNVFHRLERLHRLQQSGHDI 192
Query: 356 NALTPE---------QYQEQAQDLVFNENVLLQTLGFDVAIDHPHTHVVRTCH 487
N T Y Q ++ +E +L TLGF V + HPH +V H
Sbjct: 193 NKETTRGMKPPAVDMNYINTKQHMINSERRILATLGFVVHVKHPHRLIVAYGH 245
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +3
Query: 489 LXKATKDLAQTSYFMASNSLHLTTMCLQYXPTVVACFCIHLASKWSNWLIPQSYEGRHWF 668
+ ++ D+ Q S+ ++ L T + ++Y P +AC CI LA++ I HWF
Sbjct: 249 ITQSRPDILQRSWNYMNDGLR-TDIFMRYKPETIACACIFLAARTVENPIALPSTPFHWF 307
Query: 669 SYVD 680
D
Sbjct: 308 EAFD 311
>AY557405-1|AAS64750.1| 480|Caenorhabditis elegans cyclin L
protein.
Length = 480
Score = 60.1 bits (139), Expect = 2e-09
Identities = 49/173 (28%), Positives = 70/173 (40%), Gaps = 20/173 (11%)
Frame = +2
Query: 29 EKWYFTKEQ-----LQNSPSRKCGLDADKELAYRQQAANLIQDMGQRLQVSQLCINTAIV 193
+KW T ++ + N PS GL + E R LIQ L++ Q T +
Sbjct: 73 DKWLMTLDEESRLKIDNPPSLVDGLSKETESELRYLGCELIQQGAILLKLPQTAAATGQI 132
Query: 194 YMHRFYAFHSFTQFHRNXXXXXXXXXXXKVEEQPRKLEYVIKVAHVC--LHR----GEGV 355
R+Y SF ++H K+EE+PR+ V V H LHR G +
Sbjct: 133 LFQRYYYQKSFVRYHFEHAVQACLLLASKIEEEPRRPREVYNVFHRLERLHRLQQSGHDI 192
Query: 356 NALTPE---------QYQEQAQDLVFNENVLLQTLGFDVAIDHPHTHVVRTCH 487
N T Y Q ++ +E +L TLGF V + HPH +V H
Sbjct: 193 NKETTRGMKPPAVDMNYINTKQHMINSERRILATLGFVVHVKHPHRLIVAYGH 245
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +3
Query: 489 LXKATKDLAQTSYFMASNSLHLTTMCLQYXPTVVACFCIHLASKWSNWLIPQSYEGRHWF 668
+ ++ D+ Q S+ ++ L T + ++Y P +AC CI LA++ I HWF
Sbjct: 249 ITQSRPDILQRSWNYMNDGLR-TDIFMRYKPETIACACIFLAARTVENPIALPSTPFHWF 307
Query: 669 SYVD 680
D
Sbjct: 308 EAFD 311
>L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protein
1.2, isoform a protein.
Length = 555
Score = 57.6 bits (133), Expect = 1e-08
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Frame = +2
Query: 47 KEQLQNSPSRKCGLDADKELAYRQQAANLIQDMGQRL---QVSQLCINTAIVYMHRFYAF 217
++ L ++PSR+ G+ ++EL+ RQQ I D+ +L + A +RF+
Sbjct: 28 QDMLADTPSRREGMTYEEELSKRQQGGVFIFDIAMQLTHGKGEHGLSGVAATLFNRFFNV 87
Query: 218 HSFTQFHRNXXXXXXXXXXXKVEEQPRKLEYVIKVAHVCLHRGEGVNALTPEQYQEQAQD 397
HS + K E+ P+KL+YV+ + + + + +Q
Sbjct: 88 HSLKRCDFRDVAAACVFLAGKNEDAPKKLKYVVTQLWQFKYP-HNKQFQSEQHFLDQCNV 146
Query: 398 LVFNENVLLQTLGFDVAIDHPHTHVVR 478
+ E+VLL+T+ FD+ +D PH +V++
Sbjct: 147 VTLIEDVLLKTISFDINVDLPHQYVLK 173
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/42 (30%), Positives = 28/42 (66%)
Frame = +3
Query: 504 KDLAQTSYFMASNSLHLTTMCLQYXPTVVACFCIHLASKWSN 629
KD+ +T+Y+MA++ L +T ++Y +A C+++A+ + N
Sbjct: 186 KDMVKTAYYMATDVLIITDWSVRYSCASIATACVNIAAFFHN 227
>L23648-5|AAN63385.1| 381|Caenorhabditis elegans Cyclin t protein
1.2, isoform b protein.
Length = 381
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/42 (30%), Positives = 28/42 (66%)
Frame = +3
Query: 504 KDLAQTSYFMASNSLHLTTMCLQYXPTVVACFCIHLASKWSN 629
KD+ +T+Y+MA++ L +T ++Y +A C+++A+ + N
Sbjct: 12 KDMVKTAYYMATDVLIITDWSVRYSCASIATACVNIAAFFHN 53
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 391 AGPCVQRERSATDIRFRCSDRPPPHARC 474
A C QRE+ D F ++PPPHA C
Sbjct: 416 AHKCSQREKENRD--FAAKNQPPPHAAC 441
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 391 AGPCVQRERSATDIRFRCSDRPPPHARC 474
A C QRE+ D F ++PPPHA C
Sbjct: 416 AHKCSQREKENRD--FAAKNQPPPHAAC 441
>AB009362-1|BAA23766.1| 118|Caenorhabditis elegans protein (
Caenorhabditis elegansmRNA, partial cds. ).
Length = 118
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 391 AGPCVQRERSATDIRFRCSDRPPPHARC 474
A C QRE+ D F ++PPPHA C
Sbjct: 20 AHKCSQREKENRD--FAAKNQPPPHAAC 45
>U41993-8|AAA83449.1| 497|Caenorhabditis elegans Temporarily
assigned gene nameprotein 153, isoform a protein.
Length = 497
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 341 RGEGVNALTPEQYQEQAQDLVFNENVLLQTLGFDV 445
+ +NA T + +E+ +D + NEN+ + T+GFD+
Sbjct: 150 KNRAINANT-DLTEEKLRDKIKNENIEMMTIGFDL 183
>U41993-7|AAA83450.2| 733|Caenorhabditis elegans Temporarily
assigned gene nameprotein 153, isoform b protein.
Length = 733
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 341 RGEGVNALTPEQYQEQAQDLVFNENVLLQTLGFDV 445
+ +NA T + +E+ +D + NEN+ + T+GFD+
Sbjct: 386 KNRAINANT-DLTEEKLRDKIKNENIEMMTIGFDL 419
>Z93383-3|CAB07625.1| 309|Caenorhabditis elegans Hypothetical
protein F54B8.3 protein.
Length = 309
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 427 DIRFRCSDRPPPHARCANVSPX*KRPKIWLKHHILWHQTV 546
DI F CSD R A + K +I LKH +L + +
Sbjct: 172 DIGFSCSDMTDQFPRIAQLDQYKKAKRIRLKHFVLKEEQI 211
>U64853-3|AAB04976.1| 565|Caenorhabditis elegans Hypothetical
protein K11G9.1 protein.
Length = 565
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +1
Query: 163 LSTMYQHGDSVHASVLRLPFVHTVSQECHSCSSFVPGCEGGRAAKEAGICYKSGPRMPPQ 342
L +Y+HGD L +P+ + E VP + E C K GPR PP
Sbjct: 25 LGNLYRHGDKEVHGYLGMPYAKPPTGEMRFAKP-VPADDW----TETRDCTKYGPRCPPS 79
Query: 343 R*GGER 360
G E+
Sbjct: 80 GQGLEK 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,572,798
Number of Sequences: 27780
Number of extensions: 408148
Number of successful extensions: 1078
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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