Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_A13
(869 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P03038 Cluster: Tetracycline repressor protein class A ... 166 6e-40
UniRef50_P03039 Cluster: Tetracycline repressor protein class C;... 136 5e-31
UniRef50_A6X092 Cluster: Transcriptional regulator, TetR family;... 124 4e-27
UniRef50_Q39JB6 Cluster: Transcriptional regulator, TetR family;... 109 9e-23
UniRef50_P0ACT4 Cluster: Tetracycline repressor protein class D;... 107 4e-22
UniRef50_A2VSN8 Cluster: Transcriptional regulator; n=6; Burkhol... 107 5e-22
UniRef50_Q9Z480 Cluster: Transcriptional repressor TetR; n=3; Ag... 92 1e-17
UniRef50_P21337 Cluster: Tetracycline repressor protein class E;... 88 3e-16
UniRef50_A0UAI0 Cluster: Transcriptional regulator, TetR family;... 87 4e-16
UniRef50_Q9X545 Cluster: Tetracycline repressor protein TetR; n=... 83 1e-14
UniRef50_Q9EWD6 Cluster: Putative tetR-family transcriptional re... 65 3e-09
UniRef50_Q98IT4 Cluster: Probable tetracycline repressor protein... 64 3e-09
UniRef50_Q08V54 Cluster: Tetracycline resistance regulatory prot... 60 5e-08
UniRef50_Q6ACV8 Cluster: Transcriptional regulator, TetR family;... 58 3e-07
UniRef50_P03081 Cluster: Small t antigen; n=69; root|Rep: Small ... 58 4e-07
UniRef50_Q6A7V8 Cluster: Tetracycline repressor protein; n=1; Pr... 56 1e-06
UniRef50_Q6NGF4 Cluster: Putative tetR-family transcriptional re... 53 1e-05
UniRef50_Q2AZI2 Cluster: Regulatory protein, TetR:Tetracyclin re... 52 2e-05
UniRef50_Q9FCM0 Cluster: Putative TetR-family transcriptional re... 52 3e-05
UniRef50_A1UHM0 Cluster: Transcriptional regulator, TetR family;... 52 3e-05
UniRef50_Q9S1P1 Cluster: Putative transcriptional regulator; n=1... 51 3e-05
UniRef50_Q0SHW5 Cluster: Transcriptional regulator, TetR family ... 51 4e-05
UniRef50_Q6M3X0 Cluster: Bacterial regulatory proteins, tetR fam... 50 6e-05
UniRef50_Q837P6 Cluster: Transcriptional regulator, TetR family;... 49 1e-04
UniRef50_Q0VNU4 Cluster: Transcriptional regulator, TetR family;... 49 1e-04
UniRef50_A5V518 Cluster: Transcriptional regulator, TetR family;... 47 5e-04
UniRef50_A4FKH6 Cluster: TetR-family transcriptional regulator; ... 47 5e-04
UniRef50_Q3Y3K2 Cluster: Regulatory protein, TetR:Tetracyclin re... 47 7e-04
UniRef50_A6UCP6 Cluster: Transcriptional regulator, TetR family;... 47 7e-04
UniRef50_Q0RIZ3 Cluster: Putative transcriptional regulator of t... 46 0.001
UniRef50_A6WGH8 Cluster: Transcriptional regulator, TetR family;... 46 0.001
UniRef50_Q0RTM1 Cluster: Putative regulatory protein; n=1; Frank... 46 0.001
UniRef50_A6F9A2 Cluster: Transcriptional regulator, TetR family;... 46 0.001
UniRef50_Q15W43 Cluster: Transcriptional regulator, TetR family;... 46 0.002
UniRef50_A1SM15 Cluster: Regulatory protein, TetR; n=2; Actinomy... 45 0.002
UniRef50_Q7NZ45 Cluster: Probable transcriptional regulator, Tet... 45 0.003
UniRef50_UPI000050FA8F Cluster: COG1309: Transcriptional regulat... 44 0.004
UniRef50_Q3WIN9 Cluster: Regulatory protein, TetR:Tetracyclin re... 44 0.004
UniRef50_Q0SA98 Cluster: Probable transcriptional regulator, Tet... 44 0.004
UniRef50_Q02BZ3 Cluster: Transcriptional regulator, TetR family;... 44 0.004
UniRef50_A4FQP9 Cluster: Transcriptional regulator, TetR family;... 44 0.004
UniRef50_Q0SCI1 Cluster: Probable transcriptional regulator, Tet... 44 0.005
UniRef50_P67434 Cluster: Uncharacterized HTH-type transcriptiona... 44 0.005
UniRef50_A4FLS1 Cluster: TetR-family transcriptional regulator; ... 44 0.007
UniRef50_Q2JEU1 Cluster: Transcriptional regulator, TetR family;... 43 0.009
UniRef50_Q07W52 Cluster: Transcriptional regulator, TetR family ... 43 0.009
UniRef50_A0G9J6 Cluster: Transcriptional regulator, TetR family;... 43 0.009
UniRef50_Q5YUL7 Cluster: Putative transcriptional regulator; n=1... 43 0.012
UniRef50_A6W9T1 Cluster: Regulatory protein TetR; n=3; Actinomyc... 43 0.012
UniRef50_A5CM54 Cluster: Transcriptional regulator, TetR family;... 43 0.012
UniRef50_A4BH58 Cluster: Transcriptional reguator, TetR family p... 43 0.012
UniRef50_Q9X7X9 Cluster: Putative regulatory protein; n=1; Strep... 42 0.015
UniRef50_Q7NVF9 Cluster: Probable transcriptional regulator, Tet... 42 0.015
UniRef50_Q3W877 Cluster: Regulatory protein, TetR; n=1; Frankia ... 42 0.015
UniRef50_Q0RQU0 Cluster: Putative TetR-family transcriptional re... 42 0.015
UniRef50_A4FFS8 Cluster: TetR-family transcriptional regulator; ... 42 0.015
UniRef50_A1G1K8 Cluster: Transcriptional regulator, TetR family;... 42 0.015
UniRef50_Q97TR9 Cluster: HTH transcriptional regulator TetR fami... 42 0.020
UniRef50_Q6FES7 Cluster: Putative transcriptional regulator; n=2... 42 0.020
UniRef50_Q18SY8 Cluster: Transcriptional regulator, TetR family;... 42 0.020
UniRef50_Q0AXB2 Cluster: Putative transcriptional regulator, Tet... 42 0.020
UniRef50_Q9A3T4 Cluster: Transcriptional regulator, TetR family;... 42 0.027
UniRef50_Q48AD2 Cluster: Transcriptional regulator, TetR family;... 42 0.027
UniRef50_Q393R5 Cluster: Transcriptional regulator, TetR family;... 42 0.027
UniRef50_Q135C8 Cluster: Regulatory protein, TetR precursor; n=1... 42 0.027
UniRef50_A3I766 Cluster: Transcriptional regulator, TetR family ... 42 0.027
UniRef50_A0W7D7 Cluster: Transcriptional regulator, TetR family;... 42 0.027
UniRef50_Q9FBW1 Cluster: Putative TetR-family transcriptional re... 41 0.036
UniRef50_Q5NYL8 Cluster: Transcriptional regulatory protein,TetR... 41 0.036
UniRef50_A7C9S1 Cluster: Transcriptional regulator, TetR family;... 41 0.036
UniRef50_A7BER1 Cluster: Putative uncharacterized protein; n=1; ... 41 0.036
UniRef50_Q9RWE9 Cluster: Transcriptional regulator, TetR family;... 41 0.047
UniRef50_Q9KV25 Cluster: Transcriptional reguator, TetR family; ... 41 0.047
UniRef50_Q9K017 Cluster: Transcriptional regulator, TetR family;... 41 0.047
UniRef50_Q9AJL5 Cluster: VarR; n=2; Actinomycetales|Rep: VarR - ... 41 0.047
UniRef50_A6W6F5 Cluster: Transcriptional regulator, TetR family;... 41 0.047
UniRef50_A4FJ59 Cluster: Transcriptional regulator, TetR family;... 41 0.047
UniRef50_Q9S250 Cluster: Putative transcriptional regulator; n=2... 40 0.062
UniRef50_Q6N722 Cluster: Possible transcriptional regulator, Tet... 40 0.062
UniRef50_Q62IL2 Cluster: Transcriptional reguator, TetR family; ... 40 0.062
UniRef50_Q3W4K5 Cluster: Regulatory protein, TetR; n=3; Actinomy... 40 0.062
UniRef50_A5EXF6 Cluster: TetR family transcriptional regulator; ... 40 0.062
UniRef50_A4B9Z1 Cluster: Transcriptional regulator, TetR family ... 40 0.062
UniRef50_Q9RZ11 Cluster: Transcriptional regulator, TetR family;... 40 0.082
UniRef50_Q749P4 Cluster: Transcriptional regulator, TetR family;... 40 0.082
UniRef50_Q5E8J6 Cluster: Transcriptional regulator, TetR family;... 40 0.082
UniRef50_Q2S144 Cluster: Hypothetical transcriptional regulator,... 40 0.082
UniRef50_Q9F9H1 Cluster: PhaD; n=2; Alcanivorax borkumensis|Rep:... 40 0.082
UniRef50_Q211C7 Cluster: Transcriptional regulator, TetR family;... 40 0.082
UniRef50_Q139L5 Cluster: Putative uncharacterized protein; n=1; ... 40 0.082
UniRef50_Q0S1A2 Cluster: Transcriptional regulator, MalT family ... 40 0.082
UniRef50_A6W5C2 Cluster: Transcriptional regulator, TetR family;... 40 0.082
UniRef50_A3Y7R2 Cluster: Regulatory protein, TetR; n=1; Marinomo... 40 0.082
UniRef50_A3Q347 Cluster: Transcriptional regulator, TetR family;... 40 0.082
UniRef50_A7I8M3 Cluster: Transcriptional regulator, TetR family;... 40 0.082
UniRef50_Q8F8U7 Cluster: Transcriptional regulator, tetR family;... 40 0.11
UniRef50_Q8E8I9 Cluster: Transcriptional regulator, TetR family;... 40 0.11
UniRef50_Q5WLF6 Cluster: TetR family transcriptional regulator; ... 40 0.11
UniRef50_Q0BQH2 Cluster: Transcriptional regulator, TetR family;... 40 0.11
UniRef50_Q032X3 Cluster: Transcriptional regulator; n=3; Lactoco... 40 0.11
UniRef50_A6CWX3 Cluster: Transcriptional regulator, TetR family ... 40 0.11
UniRef50_A4FP31 Cluster: TetR-family transcriptional regulator; ... 40 0.11
UniRef50_A4FF57 Cluster: Transcriptional regulator, TetR family;... 40 0.11
UniRef50_A3TXC5 Cluster: Putative transcriptional regulator; n=1... 40 0.11
UniRef50_UPI000038D50F Cluster: COG1309: Transcriptional regulat... 39 0.14
UniRef50_Q833A1 Cluster: Transcriptional regulator, TetR family;... 39 0.14
UniRef50_Q5SJJ9 Cluster: Putative uncharacterized protein TTHA10... 39 0.14
UniRef50_Q39GC4 Cluster: Transcriptional regulator, TetR family;... 39 0.14
UniRef50_Q39F78 Cluster: Transcriptional regulator, TetR family;... 39 0.14
UniRef50_Q2RT73 Cluster: Transcriptional Regulator, TetR family;... 39 0.14
UniRef50_Q2B3J4 Cluster: Transcriptional regulator, TetR family ... 39 0.14
UniRef50_A4BUX2 Cluster: Transcriptional regulator, TetR family ... 39 0.14
UniRef50_A3K8N7 Cluster: Putative transcriptional regulator, Tet... 39 0.14
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 39 0.19
UniRef50_Q47E32 Cluster: Regulatory protein, TetR; n=1; Dechloro... 39 0.19
UniRef50_Q399K3 Cluster: Transcriptional regulator, TetR family;... 39 0.19
UniRef50_Q0G3G6 Cluster: Transcriptional regulator (TetR/AcrR fa... 39 0.19
UniRef50_A7CCD1 Cluster: Transcriptional regulator, TetR family;... 39 0.19
UniRef50_A1R2Z7 Cluster: Tetracycline repressor protein; n=1; Ar... 39 0.19
UniRef50_Q9A905 Cluster: Transcriptional regulator, TetR family;... 38 0.25
UniRef50_Q92XY9 Cluster: Putative transcriptional regulator; n=3... 38 0.25
UniRef50_Q8UF32 Cluster: Transcriptional regulator, TetR family;... 38 0.25
UniRef50_Q82QS4 Cluster: Putative TetR-family transcriptional re... 38 0.25
UniRef50_Q74GP1 Cluster: Transcriptional regulator, TetR family;... 38 0.25
UniRef50_Q5LWW7 Cluster: Transcriptional regulator, TetR family;... 38 0.25
UniRef50_Q39ZX6 Cluster: TetR family transcriptional regulator; ... 38 0.25
UniRef50_Q3W3V4 Cluster: Regulatory protein, TetR; n=2; Frankia ... 38 0.25
UniRef50_Q0SJS8 Cluster: Probable tetracycline repressor protein... 38 0.25
UniRef50_Q095S5 Cluster: TetR; n=1; Stigmatella aurantiaca DW4/3... 38 0.25
UniRef50_A7HTC3 Cluster: Transcriptional regulator, TetR family;... 38 0.25
UniRef50_A7HS18 Cluster: Transcriptional regulator, TetR family;... 38 0.25
UniRef50_A6W488 Cluster: Transcriptional regulator, TetR family;... 38 0.25
UniRef50_A6Q9F4 Cluster: Transcriptional regulator, TetR family;... 38 0.25
UniRef50_A5V191 Cluster: Transcriptional regulator, TetR family;... 38 0.25
UniRef50_A4XB42 Cluster: Regulatory protein, TetR; n=2; Salinisp... 38 0.25
UniRef50_A4FLG0 Cluster: TetR-family transcriptional regulator; ... 38 0.25
UniRef50_A4BJD7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.25
UniRef50_A3VRH1 Cluster: Transcriptional regulator; n=1; Parvula... 38 0.25
UniRef50_A3TPZ3 Cluster: Possible transcriptional regulatory pro... 38 0.25
UniRef50_A0VBN2 Cluster: Transcriptional regulator, TetR family;... 38 0.25
UniRef50_Q8TLS7 Cluster: Transcriptional regulator, TetR family;... 38 0.25
UniRef50_Q8RER3 Cluster: Transcriptional regulator, TetR family;... 38 0.33
UniRef50_Q88ZN5 Cluster: Transcription regulator; n=1; Lactobaci... 38 0.33
UniRef50_Q6N4N7 Cluster: Possible transcriptional regulator, Tet... 38 0.33
UniRef50_Q6D8M2 Cluster: TetR-family transcriptional regulator; ... 38 0.33
UniRef50_Q9RP98 Cluster: Regulatory protein; n=2; Streptomyces|R... 38 0.33
UniRef50_Q1N3H1 Cluster: Transcription regulator, TetR family pr... 38 0.33
UniRef50_Q0SCA1 Cluster: Transcriptional regulator, TetR family ... 38 0.33
UniRef50_Q03ZI0 Cluster: Transcriptional regulator; n=1; Leucono... 38 0.33
UniRef50_A6Q3N1 Cluster: Transcriptional regulator, TetR family;... 38 0.33
UniRef50_A4Y017 Cluster: Transcriptional regulator, TetR family;... 38 0.33
UniRef50_A4TZZ4 Cluster: Regulatory protein, TetR; n=1; Magnetos... 38 0.33
UniRef50_A3PUZ9 Cluster: Transcriptional regulator, TetR family;... 38 0.33
UniRef50_A1T5J2 Cluster: Transcriptional regulator, TetR family;... 38 0.33
UniRef50_A0W7Y5 Cluster: Transcriptional regulator, TetR family ... 38 0.33
UniRef50_Q828S3 Cluster: Putative TetR-family transcriptional re... 38 0.44
UniRef50_Q81U36 Cluster: Transcriptional regulator, TetR family;... 38 0.44
UniRef50_Q3A7U8 Cluster: TetR family transcriptional regulator; ... 38 0.44
UniRef50_Q30RP7 Cluster: Transcriptional regulator, TetR family;... 38 0.44
UniRef50_Q7D614 Cluster: Transcriptional regulator, TetR family;... 38 0.44
UniRef50_Q3W8V8 Cluster: Regulatory protein, TetR:Tetracyclin re... 38 0.44
UniRef50_Q0LEE0 Cluster: Regulatory protein, TetR; n=1; Herpetos... 38 0.44
UniRef50_A6F2N8 Cluster: Transcriptional regulator; n=1; Marinob... 38 0.44
UniRef50_A5VLL5 Cluster: Transcriptional regulator, TetR family;... 38 0.44
UniRef50_A4F5U4 Cluster: TetR-family transcriptional regulator; ... 38 0.44
UniRef50_A3HSQ5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.44
UniRef50_A1U6A9 Cluster: Transcriptional regulator, TetR family;... 38 0.44
UniRef50_A1U599 Cluster: Transcriptional regulator, TetR family ... 38 0.44
UniRef50_A0PL09 Cluster: Transcriptional regulator; n=4; Mycobac... 38 0.44
UniRef50_A0JS18 Cluster: Transcriptional regulator, TetR family;... 38 0.44
UniRef50_Q9KFW7 Cluster: BH0353 protein; n=1; Bacillus haloduran... 37 0.58
UniRef50_Q9CFG3 Cluster: Transcriptional regulator; n=4; Lactoco... 37 0.58
UniRef50_Q8YQT9 Cluster: Transcriptional regulator; n=2; Nostoca... 37 0.58
UniRef50_Q6D8M6 Cluster: TetR-family transcriptional regulator; ... 37 0.58
UniRef50_Q65LY1 Cluster: Putative uncharacterized protein; n=1; ... 37 0.58
UniRef50_Q5YWR1 Cluster: Putative transcriptional regulator; n=1... 37 0.58
UniRef50_Q3SGW2 Cluster: Possible Transcriptional Regulator, Tet... 37 0.58
UniRef50_Q1AV27 Cluster: Transcriptional regulator, TetR family;... 37 0.58
UniRef50_A7B9X0 Cluster: Putative uncharacterized protein; n=1; ... 37 0.58
UniRef50_A6Q5T5 Cluster: Transcriptional regulator, TetR family;... 37 0.58
UniRef50_A5NW51 Cluster: Transcriptional regulator, TetR family;... 37 0.58
UniRef50_A5NUB0 Cluster: Transcriptional regulator, TetR family;... 37 0.58
UniRef50_A4X437 Cluster: Regulatory protein, TetR; n=2; Salinisp... 37 0.58
UniRef50_A4IL55 Cluster: Transcriptional regulator TetR family; ... 37 0.58
UniRef50_A3VB16 Cluster: Putative uncharacterized protein; n=1; ... 37 0.58
UniRef50_A3J8M4 Cluster: Transcriptional regulator; n=4; Gammapr... 37 0.58
UniRef50_A1SD79 Cluster: Regulatory protein, TetR; n=1; Nocardio... 37 0.58
UniRef50_P39897 Cluster: HTH-type transcriptional regulator mtrR... 37 0.58
UniRef50_Q928H4 Cluster: Lin2558 protein; n=13; Listeria|Rep: Li... 37 0.77
UniRef50_Q88XZ4 Cluster: Transcription regulator; n=2; Lactobaci... 37 0.77
UniRef50_Q7P0X9 Cluster: Acrab operon repressor; n=1; Chromobact... 37 0.77
UniRef50_Q2SD10 Cluster: Transcriptional regulator; n=1; Hahella... 37 0.77
UniRef50_Q1LBM4 Cluster: Transcriptional regulator, TetR family;... 37 0.77
UniRef50_Q0M1I1 Cluster: Regulatory protein, TetR; n=1; Caulobac... 37 0.77
UniRef50_Q03CU8 Cluster: Transcriptional regulator; n=1; Lactoba... 37 0.77
UniRef50_A6VUY6 Cluster: Transcriptional regulator, TetR family;... 37 0.77
UniRef50_A6GE02 Cluster: Transcriptional regulator, TetR family ... 37 0.77
UniRef50_A5NWI2 Cluster: Transcriptional regulator, TetR family;... 37 0.77
UniRef50_A4VL13 Cluster: Transcriptional regulator TtgR; n=1; Ps... 37 0.77
UniRef50_A1UNG4 Cluster: Transcriptional regulator, TetR family;... 37 0.77
UniRef50_A0UQS1 Cluster: Transcriptional regulator, TetR family;... 37 0.77
UniRef50_A0R315 Cluster: TetR-family protein transcriptional reg... 37 0.77
UniRef50_A0GIX8 Cluster: Transcriptional regulator, TetR family;... 37 0.77
UniRef50_Q9R9T9 Cluster: HTH-type transcriptional regulator srpR... 37 0.77
UniRef50_UPI000051045B Cluster: COG1309: Transcriptional regulat... 36 1.0
UniRef50_Q89SZ6 Cluster: Transcriptional regulatory protein; n=1... 36 1.0
UniRef50_Q7TYZ3 Cluster: Putative uncharacterized protein Mb2184... 36 1.0
UniRef50_Q79FG9 Cluster: Putative uncharacterized protein; n=2; ... 36 1.0
UniRef50_Q74EL1 Cluster: Transcriptional regulator, TetR family;... 36 1.0
UniRef50_Q5YZ51 Cluster: Putative transcriptional regulator; n=1... 36 1.0
UniRef50_Q39PZ9 Cluster: Transcriptional regulator, TetR family;... 36 1.0
UniRef50_Q39DD1 Cluster: Transcriptional regulator, TetR family;... 36 1.0
UniRef50_Q2RH86 Cluster: Transcriptional regulator, TetR family;... 36 1.0
UniRef50_Q3W8J2 Cluster: Regulatory protein, TetR; n=1; Frankia ... 36 1.0
UniRef50_Q2AGQ8 Cluster: Regulatory protein, TetR; n=1; Halother... 36 1.0
UniRef50_Q1AYW4 Cluster: Transcriptional regulator, TetR family;... 36 1.0
UniRef50_Q12BX8 Cluster: Transcriptional regulator, TetR family;... 36 1.0
UniRef50_Q025G7 Cluster: Transcriptional regulator, TetR family;... 36 1.0
UniRef50_A6W681 Cluster: Tetracyclin repressor domain protein; n... 36 1.0
UniRef50_A4XEM8 Cluster: Transcriptional regulator, TetR family;... 36 1.0
UniRef50_A4FFU4 Cluster: Putative TetR-family transcriptional re... 36 1.0
UniRef50_A3VNI7 Cluster: Transcriptional regulatory protein; n=1... 36 1.0
UniRef50_A3TSX6 Cluster: TetR-family transcriptional regulator; ... 36 1.0
UniRef50_A1ZRG6 Cluster: Transcriptional regulator, TetR family;... 36 1.0
UniRef50_A0R089 Cluster: Transcription regulator AmtR; n=2; Cory... 36 1.0
UniRef50_A0K260 Cluster: Transcriptional regulator, TetR family;... 36 1.0
UniRef50_P0ACT1 Cluster: HTH-type transcriptional regulator acrR... 36 1.0
UniRef50_Q98GZ7 Cluster: Transcriptional regulator; n=1; Mesorhi... 36 1.3
UniRef50_Q47L40 Cluster: TetR/AcrR family transcriptional regula... 36 1.3
UniRef50_Q595S5 Cluster: TetR-type regulator; n=1; Streptomyces ... 36 1.3
UniRef50_Q1JVZ2 Cluster: Transcriptional regulator, TetR family;... 36 1.3
UniRef50_Q0RMZ4 Cluster: Putative TetR-family transcriptional re... 36 1.3
UniRef50_A7MRI4 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_A7H959 Cluster: Transcriptional regulator, TetR family ... 36 1.3
UniRef50_A6W9W2 Cluster: Transcriptional regulator, TetR family;... 36 1.3
UniRef50_A6Q131 Cluster: Transcriptional regulator, TetR family;... 36 1.3
UniRef50_A6PQ02 Cluster: Transcriptional regulator, TetR family;... 36 1.3
UniRef50_A6GC42 Cluster: Transcriptional regulator, TetR family ... 36 1.3
UniRef50_A5GBM7 Cluster: Transcriptional regulator, TetR family;... 36 1.3
UniRef50_A1WSN5 Cluster: Transcriptional regulator, TetR family;... 36 1.3
UniRef50_A1GBH9 Cluster: Transcriptional regulator, TetR family ... 36 1.3
UniRef50_A1B786 Cluster: Transcriptional regulator, TetR family;... 36 1.3
UniRef50_A0LGB1 Cluster: Transcriptional regulator, TetR family ... 36 1.3
UniRef50_A0H8Z9 Cluster: Transcriptional regulator, TetR family;... 36 1.3
UniRef50_Q8ENL7 Cluster: Transcriptional regulator; n=1; Oceanob... 36 1.8
UniRef50_Q89R65 Cluster: Transcriptional regulatory protein; n=1... 36 1.8
UniRef50_Q6LR00 Cluster: Hypothetical transcriptional regulator;... 36 1.8
UniRef50_Q6FFH1 Cluster: Putative transcription regulator protei... 36 1.8
UniRef50_Q6F8T3 Cluster: Putative transcriptional regulator; n=1... 36 1.8
UniRef50_Q5YWU4 Cluster: Putative transcriptional regulator; n=1... 36 1.8
UniRef50_Q5YPH2 Cluster: Putative transcriptional regulator; n=1... 36 1.8
UniRef50_Q4KCG1 Cluster: Transcriptional regulator, TetR family;... 36 1.8
UniRef50_Q3IHU5 Cluster: Putative transcriptional regulator; n=3... 36 1.8
UniRef50_Q39LV4 Cluster: Transcriptional regulator, TetR family;... 36 1.8
UniRef50_Q2J5W2 Cluster: Transcriptional regulator, TetR family;... 36 1.8
UniRef50_Q1MXX0 Cluster: Putative transcriptional regulator; n=1... 36 1.8
UniRef50_Q1LEI3 Cluster: Transcriptional regulator, TetR family;... 36 1.8
UniRef50_Q125Q8 Cluster: Transcriptional regulator, TetR family;... 36 1.8
UniRef50_Q0BZH4 Cluster: Transcriptional regulator, TetR family;... 36 1.8
UniRef50_Q032V7 Cluster: Transcriptional regulator; n=3; Lactoco... 36 1.8
UniRef50_A6G877 Cluster: Transcriptional regulatory protein; n=1... 36 1.8
UniRef50_A6EIB9 Cluster: Transcriptional regulator, TetR family ... 36 1.8
UniRef50_A4FD36 Cluster: Transcriptional regulator, TetR family;... 36 1.8
UniRef50_A3UK84 Cluster: Transcriptional regulator, TetR family ... 36 1.8
UniRef50_A3PWM0 Cluster: Transcriptional regulator, TetR family;... 36 1.8
UniRef50_A3I7D3 Cluster: Probable transcriptional regulator, Tet... 36 1.8
UniRef50_A1UE31 Cluster: Transcriptional regulator, TetR family;... 36 1.8
UniRef50_A1IEJ9 Cluster: Putative transcriptional regulator, Tet... 36 1.8
UniRef50_A1GER9 Cluster: Transcriptional regulator, TetR family;... 36 1.8
UniRef50_A0HAA1 Cluster: Transcriptional regulator, TetR family;... 36 1.8
UniRef50_Q9AIU0 Cluster: HTH-type transcriptional regulator ttgR... 36 1.8
UniRef50_Q9KBG3 Cluster: Transcriptional regulator; n=1; Bacillu... 35 2.3
UniRef50_Q9A9I8 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_Q9A771 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_Q8XRL5 Cluster: Probable transcription regulator protei... 35 2.3
UniRef50_Q82R52 Cluster: Putative TetR-family transcriptional re... 35 2.3
UniRef50_Q65ME2 Cluster: YvkB; n=1; Bacillus licheniformis ATCC ... 35 2.3
UniRef50_Q62C99 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_Q5WJH4 Cluster: Transcriptional regulator; n=1; Bacillu... 35 2.3
UniRef50_Q5HKI3 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_Q9ZGB7 Cluster: LanK; n=2; Streptomyces|Rep: LanK - Str... 35 2.3
UniRef50_Q3VV44 Cluster: Regulatory protein, TetR; n=1; Prosthec... 35 2.3
UniRef50_Q2BPX6 Cluster: Regulatory protein, TetR; n=1; Neptunii... 35 2.3
UniRef50_Q2BNE8 Cluster: Transcriptional regulator, TetR family ... 35 2.3
UniRef50_Q189N9 Cluster: TetR-family transcriptional regulator; ... 35 2.3
UniRef50_A6UEY8 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_A6GIR7 Cluster: Putative TetR-family transcriptional re... 35 2.3
UniRef50_A5CM53 Cluster: Putative TetR-family transcriptional re... 35 2.3
UniRef50_A4XF42 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_A4FD19 Cluster: TetR family transcriptional regulatory ... 35 2.3
UniRef50_A3W375 Cluster: Transcriptional regulator, TetR family ... 35 2.3
UniRef50_A3HWG2 Cluster: Transcriptional regulator, TetR family ... 35 2.3
UniRef50_A1SNW1 Cluster: Regulatory protein, TetR; n=1; Nocardio... 35 2.3
UniRef50_A1G132 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_A0VA06 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_A0PRP9 Cluster: Conserved transcriptional regulatory pr... 35 2.3
UniRef50_A0K273 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_A0H3B4 Cluster: Regulatory protein, TetR; n=2; Chlorofl... 35 2.3
UniRef50_A0GDL1 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_Q837P3 Cluster: Transcriptional regulator, TetR family;... 35 3.1
UniRef50_Q5Z250 Cluster: Putative transcriptional regulator; n=1... 35 3.1
UniRef50_Q5YV44 Cluster: Putative transcriptional regulator; n=2... 35 3.1
UniRef50_Q2SGE6 Cluster: Transcriptional regulator; n=4; Gammapr... 35 3.1
UniRef50_Q7CUA6 Cluster: AGR_L_1315p; n=5; Bacteria|Rep: AGR_L_1... 35 3.1
UniRef50_Q3W9I0 Cluster: Regulatory protein, TetR; n=4; Actinomy... 35 3.1
UniRef50_Q1DA68 Cluster: Transcriptional regulator, TetR family;... 35 3.1
UniRef50_Q0SE93 Cluster: Probable transcriptional regulator; n=1... 35 3.1
UniRef50_Q0SE84 Cluster: Possible transcriptional regulator; n=1... 35 3.1
UniRef50_Q0S723 Cluster: Possible transcriptional regulator, Tet... 35 3.1
UniRef50_A7HT93 Cluster: Transcriptional regulator, TetR family;... 35 3.1
UniRef50_A6M2H0 Cluster: Transcriptional regulator, TetR family;... 35 3.1
UniRef50_A6GSK5 Cluster: Transcriptional regulator; n=1; Limnoba... 35 3.1
UniRef50_A6GHF4 Cluster: Probable transcriptional regulator, Tet... 35 3.1
UniRef50_A6GD80 Cluster: Transcriptional regulatory protein; n=1... 35 3.1
UniRef50_A5V6Q7 Cluster: Transcriptional regulator, TetR family;... 35 3.1
UniRef50_A5L5B9 Cluster: Hypothetical transcriptional regulator,... 35 3.1
UniRef50_A3UFG0 Cluster: Transcriptional regulator, TetR family ... 35 3.1
UniRef50_A1ZL45 Cluster: Transcriptional regulator, TetR family;... 35 3.1
UniRef50_A1UHN4 Cluster: Transcriptional regulator, TetR family;... 35 3.1
UniRef50_A1G4K2 Cluster: Transcriptional regulator, TetR family;... 35 3.1
UniRef50_A1BCK3 Cluster: Transcriptional regulator, TetR family;... 35 3.1
UniRef50_A0NPC8 Cluster: Putative TetR-family transcriptional re... 35 3.1
UniRef50_A0LCF7 Cluster: Transcriptional regulator, TetR family;... 35 3.1
UniRef50_A0FYC5 Cluster: Transcriptional regulator, TetR family;... 35 3.1
UniRef50_UPI000050FD83 Cluster: COG1309: Transcriptional regulat... 34 4.1
UniRef50_Q7NW99 Cluster: Probable transcriptional regulator, Tet... 34 4.1
UniRef50_Q749K1 Cluster: Transcriptional regulator, TetR family;... 34 4.1
UniRef50_Q4ZTV5 Cluster: Regulatory protein, TetR:Tetracyclin re... 34 4.1
UniRef50_Q39D23 Cluster: Transcriptional regulator, TetR family;... 34 4.1
UniRef50_Q2SA74 Cluster: Transcriptional regulator; n=1; Hahella... 34 4.1
UniRef50_Q134D7 Cluster: Regulatory protein, TetR; n=1; Rhodopse... 34 4.1
UniRef50_Q3W3C5 Cluster: Regulatory protein, TetR; n=1; Frankia ... 34 4.1
UniRef50_Q28NY9 Cluster: Transcriptional regulator TetR family; ... 34 4.1
UniRef50_Q21SM7 Cluster: Transcriptional regulator, TetR family;... 34 4.1
UniRef50_Q21SC8 Cluster: Transcriptional regulator, TetR family;... 34 4.1
UniRef50_Q1WVU2 Cluster: Transcriptional regulator, TetR family;... 34 4.1
UniRef50_Q1WRK8 Cluster: Transcriptional regulator, TetR family;... 34 4.1
UniRef50_Q1QZ04 Cluster: Transcriptional regulator, TetR family;... 34 4.1
UniRef50_Q1MYE0 Cluster: Transcriptional regulator; n=1; Oceanob... 34 4.1
UniRef50_Q0VQY4 Cluster: Transcriptional regulator TtgR; n=1; Al... 34 4.1
UniRef50_Q0RY73 Cluster: Transcriptional regulator, TetR family ... 34 4.1
UniRef50_Q0RKT9 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_Q0MX88 Cluster: Transcriptional regulator tetR family; ... 34 4.1
UniRef50_Q0G5G9 Cluster: Transcriptional regulator, TetR family ... 34 4.1
UniRef50_P72569 Cluster: WhiR protein; n=3; Streptomyces|Rep: Wh... 34 4.1
UniRef50_A6WFI9 Cluster: Transcriptional regulator, TetR family;... 34 4.1
UniRef50_A6GMZ7 Cluster: Transcriptional Regulator, TetR family ... 34 4.1
UniRef50_A6G672 Cluster: Transcriptional regulatory protein; n=1... 34 4.1
UniRef50_A4YS97 Cluster: Putative Transcriptional regulator, Tet... 34 4.1
UniRef50_A4FMT3 Cluster: Transcriptional regulator, TetR family;... 34 4.1
UniRef50_A3SK41 Cluster: Putative transcriptional regulator; n=1... 34 4.1
UniRef50_A3PQM3 Cluster: Transcriptional regulator, TetR family;... 34 4.1
UniRef50_A1ZGE6 Cluster: Transcriptional regulator, TetR family ... 34 4.1
UniRef50_A1ICC3 Cluster: Putative transcriptional regulator, Tet... 34 4.1
UniRef50_A0ZL59 Cluster: Transcriptional Regulator, TetR family ... 34 4.1
UniRef50_A0Z3N3 Cluster: Transcriptional regulator, TetR family ... 34 4.1
UniRef50_A7I911 Cluster: Transcriptional regulator, TetR family;... 34 4.1
UniRef50_Q9KVD2 Cluster: HTH-type protein slmA; n=72; Gammaprote... 34 4.1
UniRef50_UPI0001597E35 Cluster: YvkB; n=1; Bacillus amyloliquefa... 34 5.4
UniRef50_Q9L2D0 Cluster: Putative tetR-family transcriptional re... 34 5.4
UniRef50_Q8Y170 Cluster: Putative transcription regulator protei... 34 5.4
UniRef50_Q82PM0 Cluster: Putative TetR-family transcriptional re... 34 5.4
UniRef50_Q81XJ3 Cluster: Transcriptional regulator, putative; n=... 34 5.4
UniRef50_Q5WHL0 Cluster: Putative uncharacterized protein; n=1; ... 34 5.4
UniRef50_Q2GA94 Cluster: Transcriptional regulator, TetR family;... 34 5.4
UniRef50_O87854 Cluster: Putative transcriptional regulator; n=2... 34 5.4
UniRef50_Q7X276 Cluster: Putative transcriptional regulator; n=1... 34 5.4
UniRef50_Q51516 Cluster: PhaC1, phaC2 and phaD genes; n=24; Pseu... 34 5.4
UniRef50_Q28M46 Cluster: Transcriptional regulator TetR family; ... 34 5.4
UniRef50_Q1H0X5 Cluster: Transcriptional regulator, TetR family;... 34 5.4
UniRef50_Q0AQ89 Cluster: Transcriptional regulator, TetR family;... 34 5.4
UniRef50_A7H933 Cluster: Transcriptional regulator, TetR family;... 34 5.4
UniRef50_A6W686 Cluster: Transcriptional regulator, TetR family;... 34 5.4
UniRef50_A6ULL0 Cluster: Transcriptional regulator, TetR family;... 34 5.4
UniRef50_A4WF80 Cluster: Transcriptional regulator, TetR family;... 34 5.4
UniRef50_A4TZG1 Cluster: Transcriptional regulator, TetR family;... 34 5.4
UniRef50_A4AG32 Cluster: Putative tetR-family transcriptional re... 34 5.4
UniRef50_A1W253 Cluster: Transcriptional regulator, TetR family;... 34 5.4
UniRef50_A1UDT5 Cluster: Transcriptional regulator, TetR family;... 34 5.4
UniRef50_A1IEM2 Cluster: Putative transcriptional regulator, Tet... 34 5.4
UniRef50_A0R2N5 Cluster: Regulatory protein, TetR; n=4; Mycobact... 34 5.4
UniRef50_A0PVE7 Cluster: Transcriptional regulatory protein; n=1... 34 5.4
UniRef50_UPI00015BC840 Cluster: UPI00015BC840 related cluster; n... 33 7.1
UniRef50_Q9RSH6 Cluster: Transcriptional regulator, TetR family;... 33 7.1
UniRef50_Q9JN89 Cluster: Putative uncharacterized protein mmfR (... 33 7.1
UniRef50_Q9AA73 Cluster: Transcriptional regulator, TetR family;... 33 7.1
UniRef50_Q97FG6 Cluster: Transcriptional regulators, AcrR family... 33 7.1
UniRef50_Q8Y3M1 Cluster: Lmo2814 protein; n=13; Listeria|Rep: Lm... 33 7.1
UniRef50_Q8RDG2 Cluster: Transcriptional regulator; n=1; Thermoa... 33 7.1
UniRef50_Q8RCU4 Cluster: Transcriptional regulator; n=3; Thermoa... 33 7.1
UniRef50_Q8FR27 Cluster: Transcription regulator AmtR; n=4; Cory... 33 7.1
UniRef50_Q7NCV9 Cluster: Gll2867 protein; n=1; Gloeobacter viola... 33 7.1
UniRef50_Q6FBJ1 Cluster: Putative transcriptional regulator; n=3... 33 7.1
UniRef50_Q5Z1Z9 Cluster: Putative transcriptional regulator; n=1... 33 7.1
UniRef50_Q5YZE8 Cluster: Putative transcriptional regulator; n=2... 33 7.1
UniRef50_Q5YUJ6 Cluster: Putative transcriptional regulator; n=1... 33 7.1
UniRef50_Q47Q27 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_Q2IHW8 Cluster: Transcriptional regulator, TetR family;... 33 7.1
UniRef50_O34643 Cluster: YvkB; n=1; Bacillus subtilis|Rep: YvkB ... 33 7.1
UniRef50_Q1GVK6 Cluster: Transcriptional regulator, TetR family;... 33 7.1
UniRef50_Q0C1S9 Cluster: Transcriptional regulator, TetR family;... 33 7.1
UniRef50_Q0A9S6 Cluster: Transcriptional regulator, TetR family ... 33 7.1
UniRef50_A6LPC9 Cluster: Transcriptional regulator, TetR family;... 33 7.1
UniRef50_A6GY46 Cluster: Probable transcriptional regulator, Tet... 33 7.1
UniRef50_A6DWT9 Cluster: Transcriptional regulator, TetR family ... 33 7.1
UniRef50_A4TDE0 Cluster: Transcriptional regulator, TetR family;... 33 7.1
UniRef50_A3VI56 Cluster: Transcriptional regulator, TetR family ... 33 7.1
UniRef50_A3V093 Cluster: Transcriptional regulator, TetR family;... 33 7.1
UniRef50_A3U7E1 Cluster: Transcriptional regulator, tetR family ... 33 7.1
UniRef50_A3TZF8 Cluster: Transcriptional regulator, TetR family ... 33 7.1
UniRef50_A3PVD1 Cluster: Transcriptional regulator, TetR family;... 33 7.1
UniRef50_A3EUY3 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_A1T1K2 Cluster: Transcriptional regulator, TetR family;... 33 7.1
UniRef50_A1G785 Cluster: Transcriptional regulator, TetR family;... 33 7.1
UniRef50_A0R6G2 Cluster: Transcriptional regulator, TetR family ... 33 7.1
UniRef50_A0QSV1 Cluster: Transcriptional regulator, TetR family ... 33 7.1
UniRef50_Q9L0M0 Cluster: Putative tetR-family transcriptional re... 33 9.4
UniRef50_Q8Y3Y9 Cluster: Lmo2690 protein; n=13; Listeria|Rep: Lm... 33 9.4
UniRef50_Q8A7W8 Cluster: Transcriptional regulator, TetR family;... 33 9.4
UniRef50_Q7X3P0 Cluster: TetR-like transcriptional regulator; n=... 33 9.4
UniRef50_Q6N1R6 Cluster: Transcriptional regulator, TetR family;... 33 9.4
UniRef50_Q6MHM0 Cluster: Transcriptional reguator, TetR family; ... 33 9.4
UniRef50_Q6AMZ6 Cluster: Related to transcription regulator; n=1... 33 9.4
UniRef50_Q5QV26 Cluster: AcrAB operon repressor; n=2; Idiomarina... 33 9.4
UniRef50_Q46PV1 Cluster: Regulatory protein, TetR; n=1; Ralstoni... 33 9.4
UniRef50_Q3BMD8 Cluster: Transcriptional regulator, TetR family;... 33 9.4
UniRef50_Q39NW5 Cluster: Transcriptional regulator, TetR family;... 33 9.4
UniRef50_Q39B10 Cluster: Transcriptional regulator, TetR family;... 33 9.4
UniRef50_Q38Z06 Cluster: Putative transcriptional regulator, Tet... 33 9.4
UniRef50_Q2J8B0 Cluster: Transcriptional regulator, TetR family;... 33 9.4
UniRef50_O66122 Cluster: CprB; n=2; Streptomyces coelicolor|Rep:... 33 9.4
UniRef50_Q9RPK9 Cluster: TarA; n=3; Streptomyces|Rep: TarA - Str... 33 9.4
UniRef50_Q60011 Cluster: Virginiae butanolide receptor; n=1; Str... 33 9.4
UniRef50_Q3WD20 Cluster: Regulatory protein, TetR:Tetracyclin re... 33 9.4
UniRef50_Q2B541 Cluster: Putative uncharacterized protein; n=1; ... 33 9.4
UniRef50_Q28SU6 Cluster: Transcriptional regulator TetR family; ... 33 9.4
UniRef50_Q1Q681 Cluster: Putative uncharacterized protein; n=1; ... 33 9.4
UniRef50_Q1LF07 Cluster: Transcriptional regulator, TetR family;... 33 9.4
UniRef50_Q180H8 Cluster: TetR-family transcriptional regulator; ... 33 9.4
UniRef50_Q0YLD2 Cluster: Regulatory protein, TetR; n=2; Desulfur... 33 9.4
UniRef50_Q0M5U5 Cluster: Regulatory protein, TetR; n=1; Caulobac... 33 9.4
UniRef50_Q0BZJ7 Cluster: Transcriptional regulator, TetR family;... 33 9.4
UniRef50_Q0BY01 Cluster: Transcriptional regulator, TetR family;... 33 9.4
UniRef50_Q0A8S8 Cluster: Transcriptional regulator, TetR family;... 33 9.4
UniRef50_Q035C2 Cluster: Transcriptional regulator; n=1; Lactoba... 33 9.4
UniRef50_O68442 Cluster: Regulatory protein; n=1; Agrobacterium ... 33 9.4
UniRef50_A6X5S6 Cluster: Transcriptional regulator, TetR family;... 33 9.4
UniRef50_A6GKP8 Cluster: Probable transcriptional regulator, Tet... 33 9.4
UniRef50_A6FZV2 Cluster: Putative uncharacterized protein; n=1; ... 33 9.4
UniRef50_A5VF95 Cluster: Transcriptional regulator, TetR family;... 33 9.4
UniRef50_A5FXH2 Cluster: Transcriptional regulator, TetR family;... 33 9.4
UniRef50_A3V9K2 Cluster: Possible Transcriptional Regulator, Tet... 33 9.4
UniRef50_A3UD56 Cluster: Transcriptional regulator, TetR family ... 33 9.4
UniRef50_A3THV1 Cluster: Putative TetR-family transcriptional re... 33 9.4
UniRef50_A3PWN1 Cluster: Transcriptional regulator, TetR family;... 33 9.4
UniRef50_A0NL68 Cluster: Transcriptional regulator, TetR/AcrR fa... 33 9.4
UniRef50_A0LQV6 Cluster: Transcriptional regulator, TetR family;... 33 9.4
UniRef50_A0K170 Cluster: Transcriptional regulator, TetR family;... 33 9.4
UniRef50_A0AC55 Cluster: Putative TetR-family transcriptional re... 33 9.4
UniRef50_Q0W3G0 Cluster: Putative transcription regulator; n=1; ... 33 9.4
>UniRef50_P03038 Cluster: Tetracycline repressor protein class A
from transposon 1721; n=64; root|Rep: Tetracycline
repressor protein class A from transposon 1721 -
Escherichia coli
Length = 216
Score = 166 bits (404), Expect = 6e-40
Identities = 80/94 (85%), Positives = 80/94 (85%)
Frame = +2
Query: 116 MTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXX 295
MTKLQPNTVIRAALDLLNEVGV GLTTRKLAERLGVQQPALYWHFRNKR
Sbjct: 1 MTKLQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAML 60
Query: 296 XXNHTHSVPRADDDWRSFLIGNARSFRQALLAYR 397
NHTHSVPRADDDWRSFLIGNARSFRQALLAYR
Sbjct: 61 AENHTHSVPRADDDWRSFLIGNARSFRQALLAYR 94
>UniRef50_P03039 Cluster: Tetracycline repressor protein class C;
n=10; root|Rep: Tetracycline repressor protein class C -
Escherichia coli
Length = 219
Score = 136 bits (330), Expect = 5e-31
Identities = 65/94 (69%), Positives = 71/94 (75%)
Frame = +2
Query: 116 MTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXX 295
M KLQ VIR AL+LLN+VG+ GLTTR+LAERLGVQQPALYWHF+NKR
Sbjct: 1 MNKLQREAVIRTALELLNDVGMEGLTTRRLAERLGVQQPALYWHFKNKRALLDALAEAML 60
Query: 296 XXNHTHSVPRADDDWRSFLIGNARSFRQALLAYR 397
NHTHS PR DDDWRSFL GNA SFR+ALLAYR
Sbjct: 61 TINHTHSTPRDDDDWRSFLKGNACSFRRALLAYR 94
>UniRef50_A6X092 Cluster: Transcriptional regulator, TetR family;
n=1; Ochrobactrum anthropi ATCC 49188|Rep:
Transcriptional regulator, TetR family - Ochrobactrum
anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168)
Length = 206
Score = 124 bits (298), Expect = 4e-27
Identities = 58/97 (59%), Positives = 71/97 (73%)
Frame = +2
Query: 107 VSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXX 286
VS++ KL + VI+ AL+LLNEVG GLTTR+LAERLGVQQPALYWHF+NKR
Sbjct: 2 VSALAKLHRDAVIQTALELLNEVGEEGLTTRRLAERLGVQQPALYWHFKNKRVLLDALAE 61
Query: 287 XXXXXNHTHSVPRADDDWRSFLIGNARSFRQALLAYR 397
+H H++PRA ++WR FLI NA SFR+ALL YR
Sbjct: 62 TILAEHHDHALPRAGENWRHFLIENAHSFRRALLTYR 98
>UniRef50_Q39JB6 Cluster: Transcriptional regulator, TetR family;
n=3; Proteobacteria|Rep: Transcriptional regulator, TetR
family - Burkholderia sp. (strain 383) (Burkholderia
cepacia (strain ATCC 17760/ NCIB 9086 / R18194))
Length = 210
Score = 109 bits (262), Expect = 9e-23
Identities = 52/92 (56%), Positives = 65/92 (70%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXX 301
+L +TV+RAAL+LL+EVG+ GL+TRKLAERLGVQ P LYWHFRNK
Sbjct: 7 RLTRDTVLRAALELLDEVGIDGLSTRKLAERLGVQSPTLYWHFRNKGELLDAMAEAIMLE 66
Query: 302 NHTHSVPRADDDWRSFLIGNARSFRQALLAYR 397
H S+PR + W ++L+ NARSFR+ALLAYR
Sbjct: 67 RHDASLPRPGEAWDAWLLDNARSFRRALLAYR 98
>UniRef50_P0ACT4 Cluster: Tetracycline repressor protein class D;
n=10; Gammaproteobacteria|Rep: Tetracycline repressor
protein class D - Escherichia coli
Length = 218
Score = 107 bits (257), Expect = 4e-22
Identities = 49/94 (52%), Positives = 64/94 (68%)
Frame = +2
Query: 116 MTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXX 295
M +L +VI AAL+LLNE G+ GLTTRKLA++LG++QP LYWH +NKR
Sbjct: 1 MARLNRESVIDAALELLNETGIDGLTTRKLAQKLGIEQPTLYWHVKNKRALLDALAVEIL 60
Query: 296 XXNHTHSVPRADDDWRSFLIGNARSFRQALLAYR 397
+H +S+P A + W+SFL NA SFR+ALL YR
Sbjct: 61 ARHHDYSLPAAGESWQSFLRNNAMSFRRALLRYR 94
>UniRef50_A2VSN8 Cluster: Transcriptional regulator; n=6;
Burkholderia cepacia complex|Rep: Transcriptional
regulator - Burkholderia cenocepacia PC184
Length = 213
Score = 107 bits (256), Expect = 5e-22
Identities = 52/92 (56%), Positives = 63/92 (68%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXX 301
+L +TV+RAAL+LL+EVG+ GL+TR+LAERLGVQ P LYWHFRNK
Sbjct: 10 RLTRDTVLRAALNLLDEVGIDGLSTRRLAERLGVQSPTLYWHFRNKAELLDAMAEAIMLE 69
Query: 302 NHTHSVPRADDDWRSFLIGNARSFRQALLAYR 397
H S+PR D W +L NARSFR+ALLAYR
Sbjct: 70 RHGESLPRPGDVWDVWLAENARSFRRALLAYR 101
>UniRef50_Q9Z480 Cluster: Transcriptional repressor TetR; n=3;
Agrobacterium tumefaciens|Rep: Transcriptional repressor
TetR - Agrobacterium tumefaciens
Length = 215
Score = 92.3 bits (219), Expect = 1e-17
Identities = 44/86 (51%), Positives = 53/86 (61%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXXNHTHSV 319
++ AL LLNEVG+ L+TRKLAERLGVQQPALYWHFRNK H +
Sbjct: 8 IVDEALRLLNEVGIDKLSTRKLAERLGVQQPALYWHFRNKAELLDAINSEMLLRYHCDRL 67
Query: 320 PRADDDWRSFLIGNARSFRQALLAYR 397
P+ DW +F + NARS R+ LL R
Sbjct: 68 PKPGQDWITFTLANARSIRKTLLTVR 93
>UniRef50_P21337 Cluster: Tetracycline repressor protein class E;
n=4; Gammaproteobacteria|Rep: Tetracycline repressor
protein class E - Escherichia coli
Length = 211
Score = 87.8 bits (208), Expect = 3e-16
Identities = 43/94 (45%), Positives = 56/94 (59%)
Frame = +2
Query: 116 MTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXX 295
M +L + VI AL LL+ G+ GLTTRKLA+ L ++QP LYWH RNK+
Sbjct: 1 MARLSLDDVISMALTLLDSEGLEGLTTRKLAQSLKIEQPTLYWHVRNKQTLMNMLSEAIL 60
Query: 296 XXNHTHSVPRADDDWRSFLIGNARSFRQALLAYR 397
+HT S P + W+ FL NA SFR+ALL +R
Sbjct: 61 AKHHTRSAPLPTESWQQFLQENALSFRKALLVHR 94
>UniRef50_A0UAI0 Cluster: Transcriptional regulator, TetR family;
n=2; Bacteria|Rep: Transcriptional regulator, TetR
family - Burkholderia cenocepacia MC0-3
Length = 203
Score = 87.4 bits (207), Expect = 4e-16
Identities = 42/94 (44%), Positives = 59/94 (62%)
Frame = +2
Query: 116 MTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXX 295
M K++ + ++ AAL LL+E G+ LTTR+LA+RLGV+ ALYWH+R+K
Sbjct: 1 MAKIRRDEIVDAALALLDEQGLDALTTRRLAQRLGVESAALYWHYRDKSVLLAEMAAVAL 60
Query: 296 XXNHTHSVPRADDDWRSFLIGNARSFRQALLAYR 397
+HT VP W ++ NARSFR+ALLA+R
Sbjct: 61 ARHHTLDVPADTAQWDAWFADNARSFRRALLAHR 94
>UniRef50_Q9X545 Cluster: Tetracycline repressor protein TetR; n=4;
Actinomycetales|Rep: Tetracycline repressor protein TetR
- Corynebacterium glutamicum (Brevibacterium flavum)
Length = 199
Score = 82.6 bits (195), Expect = 1e-14
Identities = 41/92 (44%), Positives = 51/92 (55%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXX 301
+L +V+ A +L+E G+ G TTR LA L VQQP LYWHFR K
Sbjct: 7 RLDRTSVLLGARQVLDETGLDGFTTRALAAHLQVQQPGLYWHFRTKAELLAALASDVLDR 66
Query: 302 NHTHSVPRADDDWRSFLIGNARSFRQALLAYR 397
H S P +D+ W +FL+ NARSFR AL A R
Sbjct: 67 EHHASFPESDEKWDAFLLRNARSFRHALHAVR 98
>UniRef50_Q9EWD6 Cluster: Putative tetR-family transcriptional
regulator; n=2; Streptomyces|Rep: Putative tetR-family
transcriptional regulator - Streptomyces coelicolor
Length = 216
Score = 64.9 bits (151), Expect = 3e-09
Identities = 37/91 (40%), Positives = 45/91 (49%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXXN 304
L V AL LLNEVG+ GLT R +A L V+ PALYWHF++K+
Sbjct: 9 LDRRRVADTALKLLNEVGLDGLTLRAIARELDVKAPALYWHFKDKQALLDEMATEMYRRM 68
Query: 305 HTHSVPRADDDWRSFLIGNARSFRQALLAYR 397
+ D WR L+ R R ALLAYR
Sbjct: 69 IAGTPLDPADTWRERLLTANRGLRAALLAYR 99
>UniRef50_Q98IT4 Cluster: Probable tetracycline repressor protein;
n=1; Mesorhizobium loti|Rep: Probable tetracycline
repressor protein - Rhizobium loti (Mesorhizobium loti)
Length = 231
Score = 64.5 bits (150), Expect = 3e-09
Identities = 33/86 (38%), Positives = 48/86 (55%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXXNHTHSV 319
V+ AL LL EVG+ GLT R+LA+ L VQ P LYWH ++K+ +
Sbjct: 14 VVATALGLLGEVGLEGLTVRRLAKELDVQNPTLYWHIKDKQALVDEMADALLAA--WYRP 71
Query: 320 PRADDDWRSFLIGNARSFRQALLAYR 397
PR + W+ +L + R FR+A+L+ R
Sbjct: 72 PRREVSWQVWLRSSCRRFREAMLSCR 97
>UniRef50_Q08V54 Cluster: Tetracycline resistance regulatory protein
TetR; n=1; Stigmatella aurantiaca DW4/3-1|Rep:
Tetracycline resistance regulatory protein TetR -
Stigmatella aurantiaca DW4/3-1
Length = 209
Score = 60.5 bits (140), Expect = 5e-08
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
+Q V++ AL LL+E GV GLT RKLA++L +Q P+LYWHF NK+
Sbjct: 3 IQREQVVQTALALLDEGGVEGLTMRKLAQKLNIQAPSLYWHFANKQ 48
>UniRef50_Q6ACV8 Cluster: Transcriptional regulator, TetR family;
n=2; Microbacteriaceae|Rep: Transcriptional regulator,
TetR family - Leifsonia xyli subsp. xyli
Length = 203
Score = 58.0 bits (134), Expect = 3e-07
Identities = 33/86 (38%), Positives = 43/86 (50%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXXNHTHSV 319
V AAL +L++VG+ LT R+LA L VQ ALYWHF NK+ + T
Sbjct: 15 VAEAALRILDDVGLPDLTMRRLAAALDVQPSALYWHFPNKQTLLAELADRIVARSATPVR 74
Query: 320 PRADDDWRSFLIGNARSFRQALLAYR 397
P W + + A R+ALLA R
Sbjct: 75 PEPPGSWTNAVRAEADRLREALLACR 100
>UniRef50_P03081 Cluster: Small t antigen; n=69; root|Rep: Small t
antigen - Simian virus 40 (SV40)
Length = 174
Score = 57.6 bits (133), Expect = 4e-07
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +1
Query: 580 DLCEGTLLLWCDIIGQTTYRDLKL 651
DLCEGTLLLWCDIIGQTTYRDLKL
Sbjct: 151 DLCEGTLLLWCDIIGQTTYRDLKL 174
>UniRef50_Q6A7V8 Cluster: Tetracycline repressor protein; n=1;
Propionibacterium acnes|Rep: Tetracycline repressor
protein - Propionibacterium acnes
Length = 203
Score = 56.0 bits (129), Expect = 1e-06
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Frame = +2
Query: 80 GHIMFISDKVSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
G+ + + + S+TK P+ V+RA +++L+ G+ L+ R+LAERLGV+ ALYWH NK
Sbjct: 6 GNGVVVKGVIVSLTK--PD-VVRAGVEILDAYGLGDLSMRRLAERLGVKAGALYWHVANK 62
Query: 260 RXXXXXXXXXXXXXN-HTHSVPRADDDWRSFLIGNARSFRQALLAYR 397
+ + +VP D + + AR FR LLA+R
Sbjct: 63 QSLLAAVSDEILAVDGGPTTVPSQDAELSDGVDEWARCFRATLLAHR 109
>UniRef50_Q6NGF4 Cluster: Putative tetR-family transcriptional
regulator; n=1; Corynebacterium diphtheriae|Rep:
Putative tetR-family transcriptional regulator -
Corynebacterium diphtheriae
Length = 181
Score = 52.8 bits (121), Expect = 1e-05
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
+L ++I A+LD+L+ G+ +T R+LA LGV ALYWHF+NK+
Sbjct: 2 QLSKESIISASLDILDSYGLADMTMRRLATHLGVAPGALYWHFKNKQ 48
>UniRef50_Q2AZI2 Cluster: Regulatory protein, TetR:Tetracyclin
repressor, C-terminal; n=1; Bacillus weihenstephanensis
KBAB4|Rep: Regulatory protein, TetR:Tetracyclin
repressor, C-terminal - Bacillus weihenstephanensis
KBAB4
Length = 238
Score = 52.0 bits (119), Expect = 2e-05
Identities = 19/47 (40%), Positives = 36/47 (76%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
++ + ++ A+ +LL E G+ L+ R+LA+RLG+Q P+LYW+F++K+
Sbjct: 13 QISEDKILEASWELLGEEGIEKLSMRRLADRLGIQAPSLYWYFKSKQ 59
>UniRef50_Q9FCM0 Cluster: Putative TetR-family transcriptional
regulator; n=1; Streptomyces coelicolor|Rep: Putative
TetR-family transcriptional regulator - Streptomyces
coelicolor
Length = 212
Score = 51.6 bits (118), Expect = 3e-05
Identities = 25/50 (50%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +2
Query: 116 MTK-LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
MTK + ++ AAL+LL++ G+ LT R LA RL V+ ALYWH RNK+
Sbjct: 1 MTKGITRERIVTAALELLDDQGMDALTVRTLASRLDVRPSALYWHVRNKQ 50
>UniRef50_A1UHM0 Cluster: Transcriptional regulator, TetR family;
n=5; Mycobacterium|Rep: Transcriptional regulator, TetR
family - Mycobacterium sp. (strain KMS)
Length = 192
Score = 51.6 bits (118), Expect = 3e-05
Identities = 30/91 (32%), Positives = 44/91 (48%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXX 301
+L V+ AA +L+ G+ LT R+LA L V ALYWHF NK+
Sbjct: 2 QLHKRDVVDAATVILDSHGIADLTMRRLARELNVSPGALYWHFANKQ--QLLGAIADRIL 59
Query: 302 NHTHSVPRADDDWRSFLIGNARSFRQALLAY 394
+P A+ DWR ++ + R ALL++
Sbjct: 60 TPARGLP-AEADWRDRIVAVCSALRDALLSH 89
>UniRef50_Q9S1P1 Cluster: Putative transcriptional regulator; n=1;
Streptomyces coelicolor|Rep: Putative transcriptional
regulator - Streptomyces coelicolor
Length = 221
Score = 51.2 bits (117), Expect = 3e-05
Identities = 32/92 (34%), Positives = 44/92 (47%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXX 301
+L ++ ALDLLNE G+ LT R+LA+ + VQ ALY +F K+
Sbjct: 14 RLDRARTVQTALDLLNESGLDTLTMRRLAQAMDVQAGALYRYFAAKQDLLTAMAEHMVDG 73
Query: 302 NHTHSVPRADDDWRSFLIGNARSFRQALLAYR 397
+ D DW AR+ R ALLA+R
Sbjct: 74 VADAAGATGDGDWSERTARLARALRAALLAHR 105
>UniRef50_Q0SHW5 Cluster: Transcriptional regulator, TetR family
protein; n=3; Corynebacterineae|Rep: Transcriptional
regulator, TetR family protein - Rhodococcus sp. (strain
RHA1)
Length = 234
Score = 50.8 bits (116), Expect = 4e-05
Identities = 34/105 (32%), Positives = 48/105 (45%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXX 301
+L+ V+ A+ +L+E G+ LT R+LA LGVQ ALYWHF NK+
Sbjct: 27 QLRRGDVLDGAMAILDEFGLADLTMRRLATALGVQPGALYWHFPNKQTLLGALADKIL-- 84
Query: 302 NHTHSVPRADDDWRSFLIGNARSFRQALLAYRQHNGTMCSSCRSR 436
P W + A R ALLA+R + ++ SR
Sbjct: 85 -EDVDAPVTAPGWDAEFTELAHRLRTALLAHRDGAELVSATYASR 128
>UniRef50_Q6M3X0 Cluster: Bacterial regulatory proteins, tetR
family; n=4; Corynebacterium|Rep: Bacterial regulatory
proteins, tetR family - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 191
Score = 50.4 bits (115), Expect = 6e-05
Identities = 20/50 (40%), Positives = 36/50 (72%)
Frame = +2
Query: 113 SMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
++ +L ++I AA+ +L+E G+ +T R++A++L V ALYWHF+NK+
Sbjct: 3 AIVQLSKESIIGAAVSILSEFGLSDMTMRRVAKQLNVAPGALYWHFKNKQ 52
>UniRef50_Q837P6 Cluster: Transcriptional regulator, TetR family;
n=1; Enterococcus faecalis|Rep: Transcriptional
regulator, TetR family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 220
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/48 (47%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVG-VXGLTTRKLAERLGVQQPALYWHFRNKR 262
KL +T+I AA LL + + L+ RK+A++LGVQ PA+YW+F+NK+
Sbjct: 4 KLSKDTIIAAAFSLLEKSPTLEQLSMRKVAKQLGVQAPAIYWYFKNKQ 51
>UniRef50_Q0VNU4 Cluster: Transcriptional regulator, TetR family;
n=1; Alcanivorax borkumensis SK2|Rep: Transcriptional
regulator, TetR family - Alcanivorax borkumensis (strain
SK2 / ATCC 700651 / DSM 11573)
Length = 197
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +2
Query: 134 NTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+T+++ A LLNE G+ GL+ RKLAER GV + A Y HFR+K
Sbjct: 14 DTLLQEANTLLNEQGIEGLSLRKLAERAGVSRTAPYHHFRDK 55
>UniRef50_A5V518 Cluster: Transcriptional regulator, TetR family;
n=1; Sphingomonas wittichii RW1|Rep: Transcriptional
regulator, TetR family - Sphingomonas wittichii RW1
Length = 216
Score = 47.2 bits (107), Expect = 5e-04
Identities = 26/84 (30%), Positives = 43/84 (51%)
Frame = +2
Query: 143 IRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXXNHTHSVP 322
+ AL +++E G+ L+ R+L + L V+ +LY HFR+K T
Sbjct: 15 LEVALRIIDEEGLDALSIRRLGDELNVRGISLYHHFRSKEHILAGACELALADVRTPHT- 73
Query: 323 RADDDWRSFLIGNARSFRQALLAY 394
++ DWR +L+ NAR + AL A+
Sbjct: 74 -SNTDWREWLVDNARKYYLALRAH 96
>UniRef50_A4FKH6 Cluster: TetR-family transcriptional regulator;
n=2; Actinomycetales|Rep: TetR-family transcriptional
regulator - Saccharopolyspora erythraea (strain NRRL
23338)
Length = 228
Score = 47.2 bits (107), Expect = 5e-04
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
L + ++RAA+ LL++ G+ GL R L +RLGV A+YWH K
Sbjct: 6 LTADQIVRAAIALLDDEGLDGLNMRSLGKRLGVAATAIYWHIATK 50
>UniRef50_Q3Y3K2 Cluster: Regulatory protein, TetR:Tetracyclin
repressor, C-terminal; n=1; Enterococcus faecium DO|Rep:
Regulatory protein, TetR:Tetracyclin repressor,
C-terminal - Enterococcus faecium DO
Length = 222
Score = 46.8 bits (106), Expect = 7e-04
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEV-GVXGLTTRKLAERLGVQQPALYWHFRNKR 262
KL +I+AA D+L E + L+ R +A R+ VQ PALYW+F+NK+
Sbjct: 4 KLSQAIIIQAAFDILAETQALSQLSMRNIANRIHVQAPALYWYFKNKQ 51
>UniRef50_A6UCP6 Cluster: Transcriptional regulator, TetR family;
n=4; Rhizobiaceae|Rep: Transcriptional regulator, TetR
family - Sinorhizobium medicae WSM419
Length = 257
Score = 46.8 bits (106), Expect = 7e-04
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
L + ++ AA++LL+ GV GL R+LA+RLG +LYWH NK
Sbjct: 57 LSLDRIVAAAVELLDTRGVDGLKMRQLADRLGAGAMSLYWHVENK 101
>UniRef50_Q0RIZ3 Cluster: Putative transcriptional regulator of the
TetR family; n=1; Frankia alni ACN14a|Rep: Putative
transcriptional regulator of the TetR family - Frankia
alni (strain ACN14a)
Length = 233
Score = 46.4 bits (105), Expect = 0.001
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXXN 304
L ++ AA L E G+ +T RK+A LGVQ PA+++HF +R
Sbjct: 12 LDSEVILMAAERLAAEAGLAEVTIRKVAAVLGVQHPAVHYHF-PRRHDLVDALLGRAVRR 70
Query: 305 HTHSVPRAD-DDWRSFLIGNARSFRQAL 385
++P D DDW + L G +R AL
Sbjct: 71 FNEALPVIDSDDWETHLRGYWEGYRAAL 98
>UniRef50_A6WGH8 Cluster: Transcriptional regulator, TetR family;
n=1; Kineococcus radiotolerans SRS30216|Rep:
Transcriptional regulator, TetR family - Kineococcus
radiotolerans SRS30216
Length = 263
Score = 46.4 bits (105), Expect = 0.001
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = +2
Query: 101 DKVSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
D+ + +L + V+RAA+ L +E G+ L+ RKL ERLGV+ +LY H NK
Sbjct: 18 DEGRTRPRLSRSQVVRAAVALADESGLEALSMRKLGERLGVEAMSLYKHVANK 70
>UniRef50_Q0RTM1 Cluster: Putative regulatory protein; n=1; Frankia
alni ACN14a|Rep: Putative regulatory protein - Frankia
alni (strain ACN14a)
Length = 220
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
L TV+ AAL L +E G+ GLT R+LA LGV+ +LY H NKR
Sbjct: 6 LSRQTVLDAALRLADEGGLPGLTMRRLAAELGVEAMSLYNHVANKR 51
>UniRef50_A6F9A2 Cluster: Transcriptional regulator, TetR family;
n=1; Moritella sp. PE36|Rep: Transcriptional regulator,
TetR family - Moritella sp. PE36
Length = 221
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I AAL+L NE G +TT +A LG+ LY+HFRNK
Sbjct: 7 IIHAALELFNECGERNVTTNHIAAHLGISPGNLYYHFRNK 46
>UniRef50_Q15W43 Cluster: Transcriptional regulator, TetR family;
n=4; Gammaproteobacteria|Rep: Transcriptional regulator,
TetR family - Pseudoalteromonas atlantica (strain T6c /
BAA-1087)
Length = 208
Score = 45.6 bits (103), Expect = 0.002
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Frame = +2
Query: 134 NTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXXNHTH 313
++++ AA +L+E G+ GL+ RKLA+R+GV + A Y HF++K +H H
Sbjct: 22 SSLLEAAKAMLSESGIEGLSLRKLADRVGVSRTAPYHHFKDKN--ELLCAIAQEGFDHWH 79
Query: 314 SVPRADDDWRSFLIGNA---RSFRQALLAYRQHNGTMCSSCRSRPL---*SIPRGAQAYA 475
S A+ I N F Q+ + Y N M R + S + +A A
Sbjct: 80 S--NAERILTQTDISNREKYHQFFQSYIGYAAENPEMYDLMFGRTIWKQNSATKDLRAIA 137
Query: 476 YPAFLYKV 499
YP+F +V
Sbjct: 138 YPSFQRQV 145
>UniRef50_A1SM15 Cluster: Regulatory protein, TetR; n=2;
Actinomycetales|Rep: Regulatory protein, TetR -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 185
Score = 45.2 bits (102), Expect = 0.002
Identities = 30/86 (34%), Positives = 41/86 (47%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXXNHTHSV 319
V+ A+ +L+ G+ LT R+L LGVQ ALY HF NK+ +
Sbjct: 8 VVDRAVGVLDAYGLADLTMRRLGAELGVQPSALYHHFANKQTLLAAVADEVLARGPSGPR 67
Query: 320 PRADDDWRSFLIGNARSFRQALLAYR 397
P A DD + + G R A+LAYR
Sbjct: 68 PDAWDDRVAAVCG---ELRDAMLAYR 90
>UniRef50_Q7NZ45 Cluster: Probable transcriptional regulator, TetR
family; n=1; Chromobacterium violaceum|Rep: Probable
transcriptional regulator, TetR family - Chromobacterium
violaceum
Length = 213
Score = 44.8 bits (101), Expect = 0.003
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 134 NTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
N ++ A+L L N+ G +TT +AER+ + LY+HFRNK
Sbjct: 11 NKIVEASLQLFNQEGERVITTNHIAERMNISTGKLYYHFRNK 52
>UniRef50_UPI000050FA8F Cluster: COG1309: Transcriptional regulator;
n=1; Brevibacterium linens BL2|Rep: COG1309:
Transcriptional regulator - Brevibacterium linens BL2
Length = 163
Score = 44.4 bits (100), Expect = 0.004
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
L ++ ALD+L+ G+ L+ R+LA L VQ ALYWH ++K+
Sbjct: 3 LTAGSITTTALDILSRYGLGDLSMRRLARELDVQPSALYWHVKDKQ 48
>UniRef50_Q3WIN9 Cluster: Regulatory protein, TetR:Tetracyclin
repressor, C-terminal; n=1; Frankia sp. EAN1pec|Rep:
Regulatory protein, TetR:Tetracyclin repressor,
C-terminal - Frankia sp. EAN1pec
Length = 218
Score = 44.4 bits (100), Expect = 0.004
Identities = 25/101 (24%), Positives = 43/101 (42%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXXNHTHSV 319
VI AL++++ G+ G + R+L + LG+ +LY+HF +K +
Sbjct: 14 VIAKALEIIDRDGLEGFSIRRLGDELGINGTSLYYHFEDKDAILHGVRMLVLREGQVGAE 73
Query: 320 PRADDDWRSFLIGNARSFRQALLAYRQHNGTMCSSCRSRPL 442
P W+ L +R+ LL + M + RPL
Sbjct: 74 PLESFTWQEHLRTAVIQYREVLLRHPNTAPLMSPAALLRPL 114
>UniRef50_Q0SA98 Cluster: Probable transcriptional regulator, TetR
family protein; n=1; Rhodococcus sp. RHA1|Rep: Probable
transcriptional regulator, TetR family protein -
Rhodococcus sp. (strain RHA1)
Length = 225
Score = 44.4 bits (100), Expect = 0.004
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2
Query: 119 TKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
TKL P ++ A+LD E G G + R +A R+GV PALY+H NK
Sbjct: 25 TKLTP--ILSASLDAFYEHGFHGTSVRDIARRVGVTVPALYYHHENK 69
>UniRef50_Q02BZ3 Cluster: Transcriptional regulator, TetR family;
n=1; Solibacter usitatus Ellin6076|Rep: Transcriptional
regulator, TetR family - Solibacter usitatus (strain
Ellin6076)
Length = 212
Score = 44.4 bits (100), Expect = 0.004
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++R+A+ L E G G TTR+LA G+ +P LY HFR K
Sbjct: 14 IVRSAIHLFAEKGFRGTTTRELAAAAGITEPVLYQHFRAK 53
>UniRef50_A4FQP9 Cluster: Transcriptional regulator, TetR family;
n=1; Saccharopolyspora erythraea NRRL 2338|Rep:
Transcriptional regulator, TetR family -
Saccharopolyspora erythraea (strain NRRL 23338)
Length = 213
Score = 44.4 bits (100), Expect = 0.004
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
KL V+ AAL++L+E G GLT R +AERLGV + +LY H ++
Sbjct: 15 KLTREAVVAAALEVLDESGHNGLTMRAVAERLGVGKMSLYHHVADR 60
>UniRef50_Q0SCI1 Cluster: Probable transcriptional regulator, TetR
family protein; n=3; Actinobacteria (class)|Rep:
Probable transcriptional regulator, TetR family protein
- Rhodococcus sp. (strain RHA1)
Length = 227
Score = 44.0 bits (99), Expect = 0.005
Identities = 30/98 (30%), Positives = 43/98 (43%)
Frame = +2
Query: 104 KVSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXX 283
K L V+ AA+ L ++ GV LT R++AE LGV+ +LY H +NK
Sbjct: 8 KAEPRVPLTRERVLNAAVALADDSGVEALTMRRIAETLGVEAMSLYRHVKNKDDLLDGMV 67
Query: 284 XXXXXXNHTHSVPRADDDWRSFLIGNARSFRQALLAYR 397
+P DW+S + A S R L +R
Sbjct: 68 DVVFG---EIDLPPNGRDWKSAMRRRAISVRDVLARHR 102
>UniRef50_P67434 Cluster: Uncharacterized HTH-type transcriptional
regulator Rv1353c/MT1396; n=17; Mycobacterium|Rep:
Uncharacterized HTH-type transcriptional regulator
Rv1353c/MT1396 - Mycobacterium tuberculosis
Length = 261
Score = 44.0 bits (99), Expect = 0.005
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXXN 304
+ P +I A +L +V + L+ L + LGV ++YW+FR K+
Sbjct: 16 INPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFR-KKDDLLNAMTDRALSK 74
Query: 305 HTHSVPRAD-DDWRSFLIGNARSFRQ 379
+ + P + DWR L +ARS R+
Sbjct: 75 YVFATPYIEAGDWRETLRNHARSMRK 100
>UniRef50_A4FLS1 Cluster: TetR-family transcriptional regulator;
n=1; Saccharopolyspora erythraea NRRL 2338|Rep:
TetR-family transcriptional regulator -
Saccharopolyspora erythraea (strain NRRL 23338)
Length = 236
Score = 43.6 bits (98), Expect = 0.007
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +2
Query: 80 GHIMFISDKVSSMTK--LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFR 253
G + F +K S TK L + ++ AA++LL+ GV L+ RKLA+RL +LYWH
Sbjct: 15 GAVWFRPEK-QSRTKPLLTQDKIVSAAVELLDRDGVRQLSMRKLADRLQAHATSLYWHVS 73
Query: 254 NK 259
K
Sbjct: 74 TK 75
>UniRef50_Q2JEU1 Cluster: Transcriptional regulator, TetR family;
n=1; Frankia sp. CcI3|Rep: Transcriptional regulator,
TetR family - Frankia sp. (strain CcI3)
Length = 332
Score = 43.2 bits (97), Expect = 0.009
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AA+ L +E G G + R ++ERLGV + ALY+HF +K
Sbjct: 22 ILAAAMSLFSEQGYAGTSVRDISERLGVTKAALYYHFPSK 61
>UniRef50_Q07W52 Cluster: Transcriptional regulator, TetR family
protein; n=9; Gammaproteobacteria|Rep: Transcriptional
regulator, TetR family protein - Shewanella
frigidimarina (strain NCIMB 400)
Length = 220
Score = 43.2 bits (97), Expect = 0.009
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I A+L+L NE G +TT +A LG+ LY+HFRNK
Sbjct: 7 IIFASLELFNEHGERSITTNHIAAHLGISPGNLYYHFRNK 46
>UniRef50_A0G9J6 Cluster: Transcriptional regulator, TetR family;
n=1; Burkholderia phymatum STM815|Rep: Transcriptional
regulator, TetR family - Burkholderia phymatum STM815
Length = 244
Score = 43.2 bits (97), Expect = 0.009
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I AAL L E G G +TR++AE GV PAL ++F NK
Sbjct: 26 IIEAALGLFGERGFEGASTREIAEHAGVNAPALVYYFDNK 65
>UniRef50_Q5YUL7 Cluster: Putative transcriptional regulator; n=1;
Nocardia farcinica|Rep: Putative transcriptional
regulator - Nocardia farcinica
Length = 210
Score = 42.7 bits (96), Expect = 0.012
Identities = 18/46 (39%), Positives = 30/46 (65%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+L + V+ AL +L+E G+ ++TR +AERLGV+ + WH + K
Sbjct: 13 RLDADRVVATALAVLDERGLAAVSTRAIAERLGVRMNTVLWHVKTK 58
>UniRef50_A6W9T1 Cluster: Regulatory protein TetR; n=3;
Actinomycetales|Rep: Regulatory protein TetR -
Kineococcus radiotolerans SRS30216
Length = 194
Score = 42.7 bits (96), Expect = 0.012
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWH 247
L TV RAA +++++VG GLT +A+RLGV+ P+LY H
Sbjct: 6 LDAATVTRAAAEVVDDVGYAGLTMGLVADRLGVRAPSLYKH 46
>UniRef50_A5CM54 Cluster: Transcriptional regulator, TetR family;
n=1; Clavibacter michiganensis subsp. michiganensis
NCPPB 382|Rep: Transcriptional regulator, TetR family -
Clavibacter michiganensis subsp. michiganensis (strain
NCPPB 382)
Length = 231
Score = 42.7 bits (96), Expect = 0.012
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AA L E G+ G +TR +AER+G++Q +LY+HF K
Sbjct: 29 ILDAAAALFAEHGLSGTSTRAIAERVGIRQASLYYHFAGK 68
>UniRef50_A4BH58 Cluster: Transcriptional reguator, TetR family
protein; n=1; Reinekea sp. MED297|Rep: Transcriptional
reguator, TetR family protein - Reinekea sp. MED297
Length = 219
Score = 42.7 bits (96), Expect = 0.012
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+++AAL L NE G LTT +A+ G+ LY+HFRNK
Sbjct: 7 ILQAALVLANESGAARLTTNAMADEAGISVGNLYYHFRNK 46
>UniRef50_Q9X7X9 Cluster: Putative regulatory protein; n=1;
Streptomyces coelicolor|Rep: Putative regulatory protein
- Streptomyces coelicolor
Length = 223
Score = 42.3 bits (95), Expect = 0.015
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
L + ++ A++ NE G G + R +A R+GV PALY+H+ NK+
Sbjct: 22 LDLHPILVHAMEAFNEHGYHGTSVRNIAGRVGVTVPALYYHYENKQ 67
>UniRef50_Q7NVF9 Cluster: Probable transcriptional regulator, TetR
family; n=1; Chromobacterium violaceum|Rep: Probable
transcriptional regulator, TetR family - Chromobacterium
violaceum
Length = 214
Score = 42.3 bits (95), Expect = 0.015
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +2
Query: 113 SMTKLQP-NTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
S T+++ + +I+ +L L NE G +TT +A LG+ LY+HFRNK
Sbjct: 2 SKTRIKTYDRIIQESLKLFNEQGERSITTNHIAAHLGISPGNLYYHFRNK 51
>UniRef50_Q3W877 Cluster: Regulatory protein, TetR; n=1; Frankia sp.
EAN1pec|Rep: Regulatory protein, TetR - Frankia sp.
EAN1pec
Length = 291
Score = 42.3 bits (95), Expect = 0.015
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AA++L E G G + R ++ERLGV + ALY+HF +K
Sbjct: 17 ILSAAVELFAERGYAGTSVRDISERLGVTKAALYYHFSSK 56
>UniRef50_Q0RQU0 Cluster: Putative TetR-family transcriptional
regulator; n=1; Frankia alni ACN14a|Rep: Putative
TetR-family transcriptional regulator - Frankia alni
(strain ACN14a)
Length = 321
Score = 42.3 bits (95), Expect = 0.015
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AA+ L E G G + R ++ERLGV + ALY+HF +K
Sbjct: 17 ILAAAVSLFGEQGYAGTSVRDISERLGVTKAALYYHFPSK 56
>UniRef50_A4FFS8 Cluster: TetR-family transcriptional regulator;
n=7; Bacteria|Rep: TetR-family transcriptional regulator
- Saccharopolyspora erythraea (strain NRRL 23338)
Length = 188
Score = 42.3 bits (95), Expect = 0.015
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
L V++AA +L +EVG LT LA R GV+ +LY H RN R
Sbjct: 6 LTTERVVQAAAELADEVGFGNLTVSALARRFGVKDASLYSHVRNLR 51
>UniRef50_A1G1K8 Cluster: Transcriptional regulator, TetR family;
n=7; Xanthomonadaceae|Rep: Transcriptional regulator,
TetR family - Stenotrophomonas maltophilia R551-3
Length = 228
Score = 42.3 bits (95), Expect = 0.015
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 119 TKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++L +AALDL+ E GV + LA RLGV + + YWHF ++
Sbjct: 46 SRLSAEDWAQAALDLIAEQGVGAVAVEPLARRLGVTKGSFYWHFPSR 92
>UniRef50_Q97TR9 Cluster: HTH transcriptional regulator TetR family;
n=4; Clostridium|Rep: HTH transcriptional regulator TetR
family - Clostridium acetobutylicum
Length = 187
Score = 41.9 bits (94), Expect = 0.020
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRN 256
L +I+ A L +E+G+ +T +KLAE+L ++ P+LY HF N
Sbjct: 6 LTKEKIIQIAFSLADEIGLDKVTFQKLAEKLDIKSPSLYNHFSN 49
>UniRef50_Q6FES7 Cluster: Putative transcriptional regulator; n=2;
Acinetobacter|Rep: Putative transcriptional regulator -
Acinetobacter sp. (strain ADP1)
Length = 229
Score = 41.9 bits (94), Expect = 0.020
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +2
Query: 107 VSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
VS + K + + +++ +L L NE G +TT +A LG+ LY+HFRNK+
Sbjct: 3 VSKVLKTK-DRILQISLQLFNERGERSVTTNHIAAELGISPGNLYYHFRNKQ 53
>UniRef50_Q18SY8 Cluster: Transcriptional regulator, TetR family;
n=2; Desulfitobacterium hafniense|Rep: Transcriptional
regulator, TetR family - Desulfitobacterium hafniense
(strain DCB-2)
Length = 201
Score = 41.9 bits (94), Expect = 0.020
Identities = 16/41 (39%), Positives = 31/41 (75%)
Frame = +2
Query: 137 TVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+++ A+ L+NE G+ GL+TR++A+R GV + ++ HF++K
Sbjct: 11 SLVITAISLINEKGLQGLSTREVAKREGVSEATIFKHFKSK 51
>UniRef50_Q0AXB2 Cluster: Putative transcriptional regulator, TetR
family; n=1; Syntrophomonas wolfei subsp. wolfei str.
Goettingen|Rep: Putative transcriptional regulator, TetR
family - Syntrophomonas wolfei subsp. wolfei (strain
Goettingen)
Length = 241
Score = 41.9 bits (94), Expect = 0.020
Identities = 16/40 (40%), Positives = 29/40 (72%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I A+++++++GV GLT R++A R + + A+Y HF NK
Sbjct: 12 IILTAVEIIDQLGVQGLTIREIASRQEISEAAIYRHFANK 51
>UniRef50_Q9A3T4 Cluster: Transcriptional regulator, TetR family;
n=2; Caulobacter|Rep: Transcriptional regulator, TetR
family - Caulobacter crescentus (Caulobacter vibrioides)
Length = 210
Score = 41.5 bits (93), Expect = 0.027
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AAL L ++ GV ++TR++AE G+ QPALY +F K
Sbjct: 23 ILDAALTLFSQKGVQAVSTRQIAEIAGISQPALYAYFATK 62
>UniRef50_Q48AD2 Cluster: Transcriptional regulator, TetR family;
n=1; Colwellia psychrerythraea 34H|Rep: Transcriptional
regulator, TetR family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 218
Score = 41.5 bits (93), Expect = 0.027
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I+A+++L NE G +TT +A L + LY+HFRNK
Sbjct: 7 IIQASIELFNEQGERNVTTNHIAAHLAISPGNLYYHFRNK 46
>UniRef50_Q393R5 Cluster: Transcriptional regulator, TetR family;
n=9; Burkholderia cepacia complex|Rep: Transcriptional
regulator, TetR family - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 277
Score = 41.5 bits (93), Expect = 0.027
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I AA++L E G G +TR++A GV PAL ++F NK
Sbjct: 25 IIEAAIELFGERGFAGASTREIAAMAGVNAPALQYYFENK 64
>UniRef50_Q135C8 Cluster: Regulatory protein, TetR precursor; n=1;
Rhodopseudomonas palustris BisB5|Rep: Regulatory
protein, TetR precursor - Rhodopseudomonas palustris
(strain BisB5)
Length = 223
Score = 41.5 bits (93), Expect = 0.027
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXXN 304
L P ++ AA++L+ VG + RKL ++LG + +HF++K +
Sbjct: 12 LAPEAIVAAAIELIEHVGEADFSLRKLGQKLGCDPMTVLYHFKSK------DGLLRAMAD 65
Query: 305 HTHSVPRADD---DWRSFLIGNARSFRQALLAY 394
H + +A D DWR L A +R+ LA+
Sbjct: 66 HLTAQLQASDPTLDWRGRLRALAFEYRRVALAF 98
>UniRef50_A3I766 Cluster: Transcriptional regulator, TetR family
protein; n=1; Bacillus sp. B14905|Rep: Transcriptional
regulator, TetR family protein - Bacillus sp. B14905
Length = 193
Score = 41.5 bits (93), Expect = 0.027
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 119 TKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
TK +I AAL L+++ G TT+ +AE GV + L+ HF NKR
Sbjct: 3 TKGTAERIIEAALQLISDKGYTAATTKTIAELAGVNEVTLFRHFGNKR 50
>UniRef50_A0W7D7 Cluster: Transcriptional regulator, TetR family;
n=1; Geobacter lovleyi SZ|Rep: Transcriptional
regulator, TetR family - Geobacter lovleyi SZ
Length = 203
Score = 41.5 bits (93), Expect = 0.027
Identities = 17/49 (34%), Positives = 32/49 (65%)
Frame = +2
Query: 116 MTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
+T ++ +++AAL ++ +GV GLT ++A G+ + +Y HFRNK+
Sbjct: 11 VTHVRQAEIVQAALSVIGRLGVSGLTIHEVALSAGMSEANIYRHFRNKQ 59
>UniRef50_Q9FBW1 Cluster: Putative TetR-family transcriptional
regulator; n=1; Streptomyces coelicolor|Rep: Putative
TetR-family transcriptional regulator - Streptomyces
coelicolor
Length = 190
Score = 41.1 bits (92), Expect = 0.036
Identities = 17/40 (42%), Positives = 29/40 (72%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AA +LL+ G L+ R++AER+G++ P+LY HF +K
Sbjct: 16 IMSAARELLDAEGPDALSMRRIAERVGIRAPSLYKHFADK 55
>UniRef50_Q5NYL8 Cluster: Transcriptional regulatory protein,TetR
family; n=3; Rhodocyclaceae|Rep: Transcriptional
regulatory protein,TetR family - Azoarcus sp. (strain
EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 196
Score = 41.1 bits (92), Expect = 0.036
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+L + I AA D+L E GV GL LA+RL V + + YWHF+++
Sbjct: 7 QLDRDAWIVAATDVLAEEGVAGLRVEVLAKRLKVTKGSFYWHFQDR 52
>UniRef50_A7C9S1 Cluster: Transcriptional regulator, TetR family;
n=2; Ralstonia pickettii|Rep: Transcriptional regulator,
TetR family - Ralstonia pickettii 12D
Length = 217
Score = 41.1 bits (92), Expect = 0.036
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+L PN +RAA DLL + + LA++L V + + YWHF+N+
Sbjct: 26 QLTPNDWVRAATDLLVTKSIDAVRVDVLAKQLDVTRGSFYWHFKNR 71
>UniRef50_A7BER1 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 236
Score = 41.1 bits (92), Expect = 0.036
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 110 SSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
S L ++ AL L++E G+ L+ R L +RLGV Q A Y HF +K
Sbjct: 4 SKQRALSREIILSTALGLVDEEGLSALSLRSLGKRLGVSQAAFYRHFPDK 53
>UniRef50_Q9RWE9 Cluster: Transcriptional regulator, TetR family;
n=1; Deinococcus radiodurans|Rep: Transcriptional
regulator, TetR family - Deinococcus radiodurans
Length = 215
Score = 40.7 bits (91), Expect = 0.047
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
KL +V+ AA L+ E G LT R LAERL V+ +LY HF ++
Sbjct: 29 KLSRESVLDAAQQLVEEQGAEALTMRTLAERLEVRPSSLYRHFAHR 74
>UniRef50_Q9KV25 Cluster: Transcriptional reguator, TetR family;
n=28; Vibrionales|Rep: Transcriptional reguator, TetR
family - Vibrio cholerae
Length = 242
Score = 40.7 bits (91), Expect = 0.047
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
++ AAL+L N+ G +TT +A + + LY+HFRNK+
Sbjct: 38 IVHAALELFNQQGERNITTNHIAAHIEISPGNLYYHFRNKQ 78
>UniRef50_Q9K017 Cluster: Transcriptional regulator, TetR family;
n=4; Neisseria|Rep: Transcriptional regulator, TetR
family - Neisseria meningitidis serogroup B
Length = 216
Score = 40.7 bits (91), Expect = 0.047
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I A+L L NE G ++T +A LG+ LY+HFRNK
Sbjct: 15 IIDASLALFNEEGERNISTNHIAAHLGISPGNLYYHFRNK 54
>UniRef50_Q9AJL5 Cluster: VarR; n=2; Actinomycetales|Rep: VarR -
Streptomyces virginiae
Length = 247
Score = 40.7 bits (91), Expect = 0.047
Identities = 28/98 (28%), Positives = 43/98 (43%)
Frame = +2
Query: 101 DKVSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXX 280
++ S L ++ AA+ LL+E G T R LA LGV ++YW+ NK
Sbjct: 28 ERGSGAGSLDRERIVAAAVRLLDEQGDAKFTMRVLATELGVTPMSVYWYIANKDDLMELA 87
Query: 281 XXXXXXXNHTHSVPRADDDWRSFLIGNARSFRQALLAY 394
P A DWR L A S+R+ ++++
Sbjct: 88 LDAVAAEIKLPD-PAAGLDWREDLRALALSWRRTMVSH 124
>UniRef50_A6W6F5 Cluster: Transcriptional regulator, TetR family;
n=1; Kineococcus radiotolerans SRS30216|Rep:
Transcriptional regulator, TetR family - Kineococcus
radiotolerans SRS30216
Length = 232
Score = 40.7 bits (91), Expect = 0.047
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AA L E G +TR +AER+G++Q +LY+HF K
Sbjct: 37 ILDAAAALFGESGYAATSTRAIAERVGIRQASLYYHFAGK 76
>UniRef50_A4FJ59 Cluster: Transcriptional regulator, TetR family;
n=1; Saccharopolyspora erythraea NRRL 2338|Rep:
Transcriptional regulator, TetR family -
Saccharopolyspora erythraea (strain NRRL 23338)
Length = 204
Score = 40.7 bits (91), Expect = 0.047
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 119 TKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
T+++ V+RAAL+L++E G+ G++ R +A GV + +HF R
Sbjct: 17 TEVRRRQVVRAALELISEQGIAGVSARDIARHAGVSPGTITYHFSGVR 64
>UniRef50_Q9S250 Cluster: Putative transcriptional regulator; n=2;
Streptomyces|Rep: Putative transcriptional regulator -
Streptomyces coelicolor
Length = 213
Score = 40.3 bits (90), Expect = 0.062
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
L + ++ A L++ G+ ++TR+LA LGV P+LY HFR K
Sbjct: 9 LSTDRIVETARALVDAEGLAAVSTRRLAAELGVSGPSLYNHFRTK 53
>UniRef50_Q6N722 Cluster: Possible transcriptional regulator, TetR
family; n=2; Proteobacteria|Rep: Possible
transcriptional regulator, TetR family -
Rhodopseudomonas palustris
Length = 230
Score = 40.3 bits (90), Expect = 0.062
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 107 VSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
VS L + ++ A+ L+ E+G + RKL +R+G A+ +HF+NK
Sbjct: 19 VSGPRGLAKHQIVETAVSLMEELGEAAFSVRKLGDRVGCDPMAILYHFKNK 69
>UniRef50_Q62IL2 Cluster: Transcriptional reguator, TetR family;
n=37; Proteobacteria|Rep: Transcriptional reguator, TetR
family - Burkholderia mallei (Pseudomonas mallei)
Length = 239
Score = 40.3 bits (90), Expect = 0.062
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ +L L NE+G +TT +AE + + LY+HFRNK
Sbjct: 13 ILELSLKLFNEIGEPNVTTTTIAEEMEISPGNLYYHFRNK 52
>UniRef50_Q3W4K5 Cluster: Regulatory protein, TetR; n=3;
Actinomycetales|Rep: Regulatory protein, TetR - Frankia
sp. EAN1pec
Length = 251
Score = 40.3 bits (90), Expect = 0.062
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
++ AL E G G T R +A R GV PALY+H+ NK+
Sbjct: 68 ILAGALAAFYEHGYHGTTVRDIARRAGVTVPALYYHYANKQ 108
>UniRef50_A5EXF6 Cluster: TetR family transcriptional regulator;
n=1; Dichelobacter nodosus VCS1703A|Rep: TetR family
transcriptional regulator - Dichelobacter nodosus
(strain VCS1703A)
Length = 199
Score = 40.3 bits (90), Expect = 0.062
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ +AL L +E GV T +AE+ GV + A+YWHF +K
Sbjct: 15 ILNSALILFDEQGVTATTLGAIAEKAGVTRGAIYWHFDDK 54
>UniRef50_A4B9Z1 Cluster: Transcriptional regulator, TetR family
protein; n=1; Reinekea sp. MED297|Rep: Transcriptional
regulator, TetR family protein - Reinekea sp. MED297
Length = 210
Score = 40.3 bits (90), Expect = 0.062
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I+ +L L NE G +TT +A+ +G+ LY+HF NK
Sbjct: 7 IIQVSLRLFNEKGERSITTNHIADEMGISPGLLYYHFTNK 46
>UniRef50_Q9RZ11 Cluster: Transcriptional regulator, TetR family;
n=1; Deinococcus radiodurans|Rep: Transcriptional
regulator, TetR family - Deinococcus radiodurans
Length = 224
Score = 39.9 bits (89), Expect = 0.082
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
L + R ALD L+ G+ GL+ RKLA LGV +LY +F K
Sbjct: 13 LSAEKITRQALDTLHRDGLDGLSIRKLAAELGVSPKSLYHYFPTK 57
>UniRef50_Q749P4 Cluster: Transcriptional regulator, TetR family;
n=9; Deltaproteobacteria|Rep: Transcriptional regulator,
TetR family - Geobacter sulfurreducens
Length = 203
Score = 39.9 bits (89), Expect = 0.082
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +2
Query: 113 SMTKLQP-NTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
SM+KL+ + ++RAAL+L+ E G G +AER GV +Y +F NK
Sbjct: 12 SMSKLEKRDEIVRAALELIAEHGFHGAPMALIAERAGVGAGTIYRYFENK 61
>UniRef50_Q5E8J6 Cluster: Transcriptional regulator, TetR family;
n=5; Vibrionaceae|Rep: Transcriptional regulator, TetR
family - Vibrio fischeri (strain ATCC 700601 / ES114)
Length = 214
Score = 39.9 bits (89), Expect = 0.082
Identities = 22/65 (33%), Positives = 28/65 (43%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXXNHTHSV 319
+I AL L NE G +TT +A L + LY+HFRNK T
Sbjct: 7 IIHGALTLFNENGERSVTTNHIAAHLEISPGNLYYHFRNKEEIISGIFDNYAKELKTRFQ 66
Query: 320 PRADD 334
P A+D
Sbjct: 67 PMAED 71
>UniRef50_Q2S144 Cluster: Hypothetical transcriptional regulator,
TetR family; n=1; Salinibacter ruber DSM 13855|Rep:
Hypothetical transcriptional regulator, TetR family -
Salinibacter ruber (strain DSM 13855)
Length = 212
Score = 39.9 bits (89), Expect = 0.082
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +2
Query: 92 FISDKVSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
F+S + MTK + + AAL L E G+ TTR++AE G + LY HF K
Sbjct: 16 FLSHSPTPMTKR--DDICEAALTLFAENGIEATTTREIAEHAGAAEGTLYRHFDGK 69
>UniRef50_Q9F9H1 Cluster: PhaD; n=2; Alcanivorax borkumensis|Rep:
PhaD - Alcanivorax borkumensis
Length = 233
Score = 39.9 bits (89), Expect = 0.082
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ +L L N G +TT +AE LG+ LY+HFRNK
Sbjct: 8 ILETSLVLFNRQGERNVTTNHIAEALGISPGNLYYHFRNK 47
>UniRef50_Q211C7 Cluster: Transcriptional regulator, TetR family;
n=1; Rhodopseudomonas palustris BisB18|Rep:
Transcriptional regulator, TetR family -
Rhodopseudomonas palustris (strain BisB18)
Length = 258
Score = 39.9 bits (89), Expect = 0.082
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
+I AA++L VG +TR LAE+ GV Q A+ +HF KR
Sbjct: 26 MIEAAIELFATVGYEAASTRALAEQAGVNQAAIPYHFGGKR 66
>UniRef50_Q139L5 Cluster: Putative uncharacterized protein; n=1;
Rhodopseudomonas palustris BisB5|Rep: Putative
uncharacterized protein - Rhodopseudomonas palustris
(strain BisB5)
Length = 226
Score = 39.9 bits (89), Expect = 0.082
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +2
Query: 95 ISDKVSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
I +K S T+ +I A L L E+G+ G+ TR LAE GV Q A+ +HF +K
Sbjct: 9 IQNKSSEATR---ERLIEAGLKLFAELGMDGVRTRALAEVAGVNQSAIPYHFGSK 60
>UniRef50_Q0S1A2 Cluster: Transcriptional regulator, MalT family
protein; n=1; Rhodococcus sp. RHA1|Rep: Transcriptional
regulator, MalT family protein - Rhodococcus sp. (strain
RHA1)
Length = 235
Score = 39.9 bits (89), Expect = 0.082
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +2
Query: 131 PNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
P ++ AA +L G +TR++AE +G++Q +LY HF NK
Sbjct: 21 PEEILDAAGELFTTKGFAATSTRQIAEMVGIRQASLYHHFPNK 63
>UniRef50_A6W5C2 Cluster: Transcriptional regulator, TetR family;
n=1; Kineococcus radiotolerans SRS30216|Rep:
Transcriptional regulator, TetR family - Kineococcus
radiotolerans SRS30216
Length = 259
Score = 39.9 bits (89), Expect = 0.082
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPAL--YWHFRNKRXXXXXXXXXXXX 298
L V+ AA+D ++ G+ GL+ RKL L V+ AL Y H R++
Sbjct: 36 LSKGVVLEAAIDHVDRFGLAGLSMRKLGASLEVEGMALYRYVHSRDELLDAMVDRLMDRL 95
Query: 299 XNHTHSVPRADDDWRSFLIGNARSFRQALLAYRQ 400
+ R +DDW+ FL A R+ L + Q
Sbjct: 96 YADPDVLLRPEDDWQQFLRRVAAGVRRLALEHPQ 129
>UniRef50_A3Y7R2 Cluster: Regulatory protein, TetR; n=1; Marinomonas
sp. MED121|Rep: Regulatory protein, TetR - Marinomonas
sp. MED121
Length = 236
Score = 39.9 bits (89), Expect = 0.082
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +2
Query: 89 MFISDKVSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
+ I + +T + ++ AAL L NE G ++T LA +G+ LY+HF+NK+
Sbjct: 6 LLIEKGSTELTMKTRDRILTAALALFNEEGEHKVSTNHLAAHMGMSTGNLYYHFKNKQ 63
>UniRef50_A3Q347 Cluster: Transcriptional regulator, TetR family;
n=6; Mycobacterium|Rep: Transcriptional regulator, TetR
family - Mycobacterium sp. (strain JLS)
Length = 191
Score = 39.9 bits (89), Expect = 0.082
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
V+ AALDL+ E GV G + + +A+R+GV + A+Y F+ K
Sbjct: 19 VLDAALDLIAENGVSGTSLQMIADRIGVTKAAVYHQFKTK 58
>UniRef50_A7I8M3 Cluster: Transcriptional regulator, TetR family;
n=1; Candidatus Methanoregula boonei 6A8|Rep:
Transcriptional regulator, TetR family - Methanoregula
boonei (strain 6A8)
Length = 202
Score = 39.9 bits (89), Expect = 0.082
Identities = 15/40 (37%), Positives = 29/40 (72%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I AA+D++ + G G+T +A+++GV + A+YW+F +K
Sbjct: 16 IIAAAIDVIAQRGCEGMTVDDVAKKIGVTKGAVYWYFPSK 55
>UniRef50_Q8F8U7 Cluster: Transcriptional regulator, tetR family;
n=2; Leptospira interrogans|Rep: Transcriptional
regulator, tetR family - Leptospira interrogans
Length = 203
Score = 39.5 bits (88), Expect = 0.11
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +2
Query: 104 KVSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
K S L +++ A+++L E G+ GL+ RK+AE+L + Y HF ++
Sbjct: 7 KRRSRNSLNRENIVQVAMEILQEKGIDGLSMRKIAEKLNCSVASPYSHFTSQ 58
>UniRef50_Q8E8I9 Cluster: Transcriptional regulator, TetR family;
n=12; Shewanella|Rep: Transcriptional regulator, TetR
family - Shewanella oneidensis
Length = 215
Score = 39.5 bits (88), Expect = 0.11
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I A+L+L NE G +TT +A + + LY+HFRNK
Sbjct: 7 IIYASLELFNEHGERNITTNHIAAHMNMSPGNLYYHFRNK 46
>UniRef50_Q5WLF6 Cluster: TetR family transcriptional regulator;
n=3; Bacillus|Rep: TetR family transcriptional regulator
- Bacillus clausii (strain KSM-K16)
Length = 215
Score = 39.5 bits (88), Expect = 0.11
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +2
Query: 134 NTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
N ++ AA +L E G G +T+ + E++G+ + LY+HF++K
Sbjct: 12 NEILDAADELFGEKGFEGTSTKDILEKVGIARGTLYYHFKSK 53
>UniRef50_Q0BQH2 Cluster: Transcriptional regulator, TetR family;
n=1; Granulibacter bethesdensis CGDNIH1|Rep:
Transcriptional regulator, TetR family - Granulobacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
Length = 257
Score = 39.5 bits (88), Expect = 0.11
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +2
Query: 89 MFISDKVSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
M V TKL+ +++ ALD+LN GV +TT LA + + LY+HF K+
Sbjct: 34 MMTQTVVKGKTKLK---ILKTALDILNIEGVDAMTTSHLAAVCNINEGNLYYHFHTKQ 88
>UniRef50_Q032X3 Cluster: Transcriptional regulator; n=3;
Lactococcus lactis|Rep: Transcriptional regulator -
Lactococcus lactis subsp. cremoris (strain SK11)
Length = 191
Score = 39.5 bits (88), Expect = 0.11
Identities = 15/44 (34%), Positives = 30/44 (68%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRN 256
L + +++A + L +E+G+ ++ +LAE G++ P+LY HF+N
Sbjct: 6 LTRDKIVQATIKLASEIGLSNVSFPRLAEYFGIKAPSLYNHFKN 49
>UniRef50_A6CWX3 Cluster: Transcriptional regulator, TetR family
protein; n=1; Vibrio shilonii AK1|Rep: Transcriptional
regulator, TetR family protein - Vibrio shilonii AK1
Length = 210
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I+A+L L NE G +TT +A LG+ LY++FRNK
Sbjct: 7 IIQASLKLFNEKGERVITTNHIAAHLGMSPGNLYYYFRNK 46
>UniRef50_A4FP31 Cluster: TetR-family transcriptional regulator;
n=1; Saccharopolyspora erythraea NRRL 2338|Rep:
TetR-family transcriptional regulator -
Saccharopolyspora erythraea (strain NRRL 23338)
Length = 228
Score = 39.5 bits (88), Expect = 0.11
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 146 RAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
R ALD L E G G++ +A+R+G+ PALY +F N+
Sbjct: 23 RVALDQLAESGPAGVSVNSIAKRMGITGPALYRYFENR 60
>UniRef50_A4FF57 Cluster: Transcriptional regulator, TetR family;
n=2; Actinomycetales|Rep: Transcriptional regulator,
TetR family - Saccharopolyspora erythraea (strain NRRL
23338)
Length = 254
Score = 39.5 bits (88), Expect = 0.11
Identities = 27/93 (29%), Positives = 42/93 (45%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXXN 304
L + ++ AA++L + G+ L+ R++AERLGV +LY + K
Sbjct: 33 LDADRIVAAAIELADAEGIAALSMRRVAERLGVGTMSLYTYVPGKAELLDAMLDTVYGET 92
Query: 305 HTHSVPRADDDWRSFLIGNARSFRQALLAYRQH 403
+ P AD DWR L R R+ Y +H
Sbjct: 93 ---ARPEADGDWRGRL---ERIARENWALYHRH 119
>UniRef50_A3TXC5 Cluster: Putative transcriptional regulator; n=1;
Oceanicola batsensis HTCC2597|Rep: Putative
transcriptional regulator - Oceanicola batsensis
HTCC2597
Length = 219
Score = 39.5 bits (88), Expect = 0.11
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +2
Query: 98 SDKVSSMTK-LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXX 274
+DK++ + L + +++AAL L ++ G+ L+ RK+ LGV+ +LY H NK
Sbjct: 5 ADKMTEPRRPLSRDRILQAALGLADDQGLAALSMRKVGASLGVEAMSLYNHIANKSDILA 64
Query: 275 XXXXXXXXXNHTHSVPRADDDWRSFLIGNARSFRQALLAY 394
++P D DW+ + ++S + L+ +
Sbjct: 65 GITDLVAG---EITLPTPDFDWKGEMRARSQSAHRVLMRH 101
>UniRef50_UPI000038D50F Cluster: COG1309: Transcriptional regulator;
n=1; Nostoc punctiforme PCC 73102|Rep: COG1309:
Transcriptional regulator - Nostoc punctiforme PCC 73102
Length = 201
Score = 39.1 bits (87), Expect = 0.14
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2
Query: 134 NTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
N +I A +LL+E G L+ RK+++R GV A Y HF +K
Sbjct: 14 NKLIAIATELLSEEGAHSLSLRKISQRAGVSHNAPYMHFADK 55
>UniRef50_Q833A1 Cluster: Transcriptional regulator, TetR family;
n=2; Enterococcus|Rep: Transcriptional regulator, TetR
family - Enterococcus faecalis (Streptococcus faecalis)
Length = 189
Score = 39.1 bits (87), Expect = 0.14
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRN 256
++ +A +L E+GV LT + LA LG++ P+LY HF+N
Sbjct: 12 ILESARNLAEELGVQQLTFQNLAVDLGIKYPSLYNHFKN 50
>UniRef50_Q5SJJ9 Cluster: Putative uncharacterized protein TTHA1009;
n=1; Thermus thermophilus HB8|Rep: Putative
uncharacterized protein TTHA1009 - Thermus thermophilus
(strain HB8 / ATCC 27634 / DSM 579)
Length = 104
Score = 39.1 bits (87), Expect = 0.14
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHF 250
+ +AAL+LL E G G TTR++A R GV + L+ HF
Sbjct: 14 LFQAALELLAERGYRGATTREIARRAGVSEVTLFRHF 50
>UniRef50_Q39GC4 Cluster: Transcriptional regulator, TetR family;
n=1; Burkholderia sp. 383|Rep: Transcriptional
regulator, TetR family - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 231
Score = 39.1 bits (87), Expect = 0.14
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 128 QPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
Q ++ AA L E G G + +++AE LGV + A+Y++F+NK
Sbjct: 9 QKEQILNAAAKLFIEKGFGGASMQEIAESLGVTRTAVYYYFKNK 52
>UniRef50_Q39F78 Cluster: Transcriptional regulator, TetR family;
n=1; Burkholderia sp. 383|Rep: Transcriptional
regulator, TetR family - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 188
Score = 39.1 bits (87), Expect = 0.14
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 113 SMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+M+ L N I A D L+ G G++ LA RL V + + Y HFRN+
Sbjct: 4 TMSTLTRNDWIAAGFDALDGEGYAGISAESLARRLNVTRGSFYHHFRNR 52
>UniRef50_Q2RT73 Cluster: Transcriptional Regulator, TetR family;
n=1; Rhodospirillum rubrum ATCC 11170|Rep:
Transcriptional Regulator, TetR family - Rhodospirillum
rubrum (strain ATCC 11170 / NCIB 8255)
Length = 194
Score = 39.1 bits (87), Expect = 0.14
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 143 IRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
I AAL+ L + G + LA+RLGV + YWHFR++
Sbjct: 15 IEAALEALADGGATAVRIEALAKRLGVTKGGFYWHFRDR 53
>UniRef50_Q2B3J4 Cluster: Transcriptional regulator, TetR family
protein; n=1; Bacillus sp. NRRL B-14911|Rep:
Transcriptional regulator, TetR family protein -
Bacillus sp. NRRL B-14911
Length = 195
Score = 39.1 bits (87), Expect = 0.14
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 95 ISDKVSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+S + S+ ++L ++ AA +L G + RK+A+ L ALY+HF+NK
Sbjct: 1 MSPRKSAQSELTKEAILDAARELFVSQGYSSASMRKVAQALNCSHGALYYHFKNK 55
>UniRef50_A4BUX2 Cluster: Transcriptional regulator, TetR family
protein; n=1; Nitrococcus mobilis Nb-231|Rep:
Transcriptional regulator, TetR family protein -
Nitrococcus mobilis Nb-231
Length = 203
Score = 39.1 bits (87), Expect = 0.14
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 149 AALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
AAL+++ E G + LA RLGV + + YWHF N++
Sbjct: 17 AALEIIAESGFDTVAVEPLARRLGVTKGSFYWHFANRQ 54
>UniRef50_A3K8N7 Cluster: Putative transcriptional regulator, TetR
family protein; n=1; Sagittula stellata E-37|Rep:
Putative transcriptional regulator, TetR family protein
- Sagittula stellata E-37
Length = 250
Score = 39.1 bits (87), Expect = 0.14
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWH 247
L N V+ AA+ + E G+ + R+LA +LGV +YWH
Sbjct: 22 LNKNQVVAAAIAQIGEKGLAAFSLRELARKLGVSPAVIYWH 62
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 38.7 bits (86), Expect = 0.19
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +3
Query: 525 ARHWPSFYNVVTGKTASLGSL 587
A HWPSFYNVVTGKT +L +L
Sbjct: 3 AWHWPSFYNVVTGKTLALPNL 23
>UniRef50_Q47E32 Cluster: Regulatory protein, TetR; n=1;
Dechloromonas aromatica RCB|Rep: Regulatory protein,
TetR - Dechloromonas aromatica (strain RCB)
Length = 205
Score = 38.7 bits (86), Expect = 0.19
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I AA + +E GV T K+A+ GV + A+YWHF++K
Sbjct: 16 LIDAARTVFHECGVSRSTLEKIAKAAGVTRGAVYWHFKDK 55
>UniRef50_Q399K3 Cluster: Transcriptional regulator, TetR family;
n=4; Bacteria|Rep: Transcriptional regulator, TetR
family - Burkholderia sp. (strain 383) (Burkholderia
cepacia (strain ATCC 17760/ NCIB 9086 / R18194))
Length = 224
Score = 38.7 bits (86), Expect = 0.19
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
L +I AA+++L+ G LT R LA RL A+YWH +K
Sbjct: 14 LSKERIIDAAIEILDNEGEGALTFRALAARLATGSGAIYWHVADK 58
>UniRef50_Q0G3G6 Cluster: Transcriptional regulator (TetR/AcrR
family) protein; n=1; Fulvimarina pelagi HTCC2506|Rep:
Transcriptional regulator (TetR/AcrR family) protein -
Fulvimarina pelagi HTCC2506
Length = 238
Score = 38.7 bits (86), Expect = 0.19
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 116 MTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
M K +I A+ DL+ E G G + + +AER+G+ + +LY H +NK
Sbjct: 1 MVKSSREQIIIASRDLIREKGYAGTSMQDVAERVGLLKGSLYTHVKNK 48
>UniRef50_A7CCD1 Cluster: Transcriptional regulator, TetR family;
n=2; Ralstonia pickettii|Rep: Transcriptional regulator,
TetR family - Ralstonia pickettii 12D
Length = 275
Score = 38.7 bits (86), Expect = 0.19
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 134 NTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
N ++ AA D+ GV + +A+ GV + A+YWHFRNK
Sbjct: 66 NRILDAAEDVFYARGVARTSLSDIAQAAGVTRGAIYWHFRNK 107
>UniRef50_A1R2Z7 Cluster: Tetracycline repressor protein; n=1;
Arthrobacter aurescens TC1|Rep: Tetracycline repressor
protein - Arthrobacter aurescens (strain TC1)
Length = 225
Score = 38.7 bits (86), Expect = 0.19
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 119 TKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
T+L P T+I A L + ++ LT R+L + L V A+Y HFRN+
Sbjct: 12 TRLDPATIIDAVLRISSQELGERLTVRRLGQELDVDATAVYRHFRNR 58
>UniRef50_Q9A905 Cluster: Transcriptional regulator, TetR family;
n=2; Caulobacter|Rep: Transcriptional regulator, TetR
family - Caulobacter crescentus (Caulobacter vibrioides)
Length = 211
Score = 38.3 bits (85), Expect = 0.25
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
L+ ++ AA + G G T RK+A+ +GV ALY HFR+K
Sbjct: 21 LRRGEILAAAEKIFIAEGYAGATIRKIADAVGVSSTALYMHFRDK 65
>UniRef50_Q92XY9 Cluster: Putative transcriptional regulator; n=3;
Alphaproteobacteria|Rep: Putative transcriptional
regulator - Rhizobium meliloti (Sinorhizobium meliloti)
Length = 201
Score = 38.3 bits (85), Expect = 0.25
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRN 256
+L T+++AA D+L E G LT +A R GV +P +Y H+ N
Sbjct: 18 QLAQATILKAAHDILTEDGFGRLTVEAVAARSGVGKPTIYRHWAN 62
>UniRef50_Q8UF32 Cluster: Transcriptional regulator, TetR family;
n=1; Agrobacterium tumefaciens str. C58|Rep:
Transcriptional regulator, TetR family - Agrobacterium
tumefaciens (strain C58 / ATCC 33970)
Length = 220
Score = 38.3 bits (85), Expect = 0.25
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AALDL N G +TT ++AE + + + LY+HFR K
Sbjct: 19 ILDAALDLFNGRGPDRVTTAEIAEAVKINEGNLYYHFRTK 58
>UniRef50_Q82QS4 Cluster: Putative TetR-family transcriptional
regulator; n=1; Streptomyces avermitilis|Rep: Putative
TetR-family transcriptional regulator - Streptomyces
avermitilis
Length = 214
Score = 38.3 bits (85), Expect = 0.25
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AAL++L E G GLT +K+ +R GV + + +HF +K
Sbjct: 21 LLNAALEILAEEGYRGLTVKKVGDRAGVSRGMVNYHFMSK 60
>UniRef50_Q74GP1 Cluster: Transcriptional regulator, TetR family;
n=2; Desulfuromonadales|Rep: Transcriptional regulator,
TetR family - Geobacter sulfurreducens
Length = 208
Score = 38.3 bits (85), Expect = 0.25
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I A+ L NE G +TT +A + + LY+HFRNK
Sbjct: 7 IIETAITLFNEKGTKAVTTNHIAAAMEISPGNLYYHFRNK 46
>UniRef50_Q5LWW7 Cluster: Transcriptional regulator, TetR family;
n=4; Rhodobacteraceae|Rep: Transcriptional regulator,
TetR family - Silicibacter pomeroyi
Length = 212
Score = 38.3 bits (85), Expect = 0.25
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +2
Query: 149 AALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXXNHTHSVPRA 328
AA +LL E GV + LA++LGV + YW+F+++ N + V RA
Sbjct: 17 AAYELLTESGVEAVKIMPLAQKLGVSRTGFYWYFKDRETLLEAMIQRWEEKNTGNLVARA 76
Query: 329 D 331
+
Sbjct: 77 E 77
>UniRef50_Q39ZX6 Cluster: TetR family transcriptional regulator;
n=1; Pelobacter carbinolicus DSM 2380|Rep: TetR family
transcriptional regulator - Pelobacter carbinolicus
(strain DSM 2380 / Gra Bd 1)
Length = 202
Score = 38.3 bits (85), Expect = 0.25
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AAL+L + G T ++A GV + A+YWHF++K
Sbjct: 16 ILEAALELFHAKGYTRTTLEEIARSAGVTRGAIYWHFKDK 55
>UniRef50_Q3W3V4 Cluster: Regulatory protein, TetR; n=2; Frankia sp.
EAN1pec|Rep: Regulatory protein, TetR - Frankia sp.
EAN1pec
Length = 205
Score = 38.3 bits (85), Expect = 0.25
Identities = 16/40 (40%), Positives = 30/40 (75%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+++AALD+L + G G + +++A+R+GV QPAL +F ++
Sbjct: 21 ILQAALDVLAQRGERGSSLQEIADRVGVTQPALLHYFSSR 60
>UniRef50_Q0SJS8 Cluster: Probable tetracycline repressor protein;
n=2; Rhodococcus sp. RHA1|Rep: Probable tetracycline
repressor protein - Rhodococcus sp. (strain RHA1)
Length = 223
Score = 38.3 bits (85), Expect = 0.25
Identities = 18/85 (21%), Positives = 42/85 (49%)
Frame = +2
Query: 143 IRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXXNHTHSVP 322
+ A++++++ G+ + +LA+ +GV+ P+LY HF +K +
Sbjct: 15 VAASIEIIDSEGLDAFSLPRLAKHIGVRAPSLYHHFSDKSEILEAVARQIAGAGNLPR-R 73
Query: 323 RADDDWRSFLIGNARSFRQALLAYR 397
+ DW F + + + R+++L +R
Sbjct: 74 KPGPDWPEFFVTLSMNLRRSILKHR 98
>UniRef50_Q095S5 Cluster: TetR; n=1; Stigmatella aurantiaca
DW4/3-1|Rep: TetR - Stigmatella aurantiaca DW4/3-1
Length = 180
Score = 38.3 bits (85), Expect = 0.25
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 221 VQQPALYWHFRNKR-XXXXXXXXXXXXXNHTHSVPRADDDWRSFLIGNARSFRQALLAYR 397
+Q PALYWHF++K+ P A W ++ + RS RQ LL+YR
Sbjct: 1 MQAPALYWHFKSKQDLIDEMATTMFRDLVKATGEPDAGQPWDEWMAQSGRSLRQMLLSYR 60
>UniRef50_A7HTC3 Cluster: Transcriptional regulator, TetR family;
n=1; Parvibaculum lavamentivorans DS-1|Rep:
Transcriptional regulator, TetR family - Parvibaculum
lavamentivorans DS-1
Length = 257
Score = 38.3 bits (85), Expect = 0.25
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AA L + G+ ++ RK+A ++G+ Q A+Y HF NK
Sbjct: 43 IVAAAKSLFLDDGIDHVSMRKIARKVGITQAAIYQHFENK 82
>UniRef50_A7HS18 Cluster: Transcriptional regulator, TetR family;
n=1; Parvibaculum lavamentivorans DS-1|Rep:
Transcriptional regulator, TetR family - Parvibaculum
lavamentivorans DS-1
Length = 215
Score = 38.3 bits (85), Expect = 0.25
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 134 NTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+T++ AA + G G TT ++AER GV +LY +F NK
Sbjct: 23 DTILEAAAQIFRTHGATGATTNRIAERAGVSIGSLYQYFPNK 64
>UniRef50_A6W488 Cluster: Transcriptional regulator, TetR family;
n=2; Actinomycetales|Rep: Transcriptional regulator,
TetR family - Kineococcus radiotolerans SRS30216
Length = 243
Score = 38.3 bits (85), Expect = 0.25
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AA LL E G +TTR +AE GVQ PA+Y F +K
Sbjct: 20 IVEAAAHLLGEHGPAAVTTRGVAEAAGVQAPAIYRLFGDK 59
>UniRef50_A6Q9F4 Cluster: Transcriptional regulator, TetR family;
n=1; Sulfurovum sp. NBC37-1|Rep: Transcriptional
regulator, TetR family - Sulfurovum sp. (strain NBC37-1)
Length = 217
Score = 38.3 bits (85), Expect = 0.25
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+++ AL L + G T R +A +GV+Q ALY HF+NK
Sbjct: 20 ILKNALKLFSSKGYKATTVRDIAGAMGVKQSALYNHFKNK 59
>UniRef50_A5V191 Cluster: Transcriptional regulator, TetR family;
n=2; Roseiflexus|Rep: Transcriptional regulator, TetR
family - Roseiflexus sp. RS-1
Length = 202
Score = 38.3 bits (85), Expect = 0.25
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AA +L+ E G ++ +LA R+G+ +P LY HF NK
Sbjct: 17 IMNAAQELVAEKGYGAMSMDELAARVGISKPTLYAHFANK 56
>UniRef50_A4XB42 Cluster: Regulatory protein, TetR; n=2;
Salinispora|Rep: Regulatory protein, TetR - Salinispora
tropica CNB-440
Length = 230
Score = 38.3 bits (85), Expect = 0.25
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +2
Query: 152 ALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
AL+L E G + R++AERL V + ALY+HF++K
Sbjct: 16 ALELFTEQGYEKTSLREIAERLDVTKAALYYHFKSK 51
>UniRef50_A4FLG0 Cluster: TetR-family transcriptional regulator;
n=2; Actinomycetales|Rep: TetR-family transcriptional
regulator - Saccharopolyspora erythraea (strain NRRL
23338)
Length = 220
Score = 38.3 bits (85), Expect = 0.25
Identities = 27/90 (30%), Positives = 44/90 (48%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXXN 304
L + + RA L++++ G+ GL+ R LA+ LGV+ +LY H K
Sbjct: 9 LSADRIRRAGLEIIDARGLEGLSMRGLADELGVKAASLYNHVPAKE---QLLQEIADDVT 65
Query: 305 HTHSVPRADDDWRSFLIGNARSFRQALLAY 394
+ V + DW + + ARS+R AL A+
Sbjct: 66 ASVDVSGFEVDWPTGIRTWARSYRAALTAH 95
>UniRef50_A4BJD7 Cluster: Putative uncharacterized protein; n=1;
Reinekea sp. MED297|Rep: Putative uncharacterized
protein - Reinekea sp. MED297
Length = 139
Score = 38.3 bits (85), Expect = 0.25
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
++ ++ +A +L E G+ L+ RK+A G P++Y++F+NK+
Sbjct: 2 IKKENILESARKVLTEQGINKLSLRKIAAETGCAAPSIYYYFKNKQ 47
>UniRef50_A3VRH1 Cluster: Transcriptional regulator; n=1;
Parvularcula bermudensis HTCC2503|Rep: Transcriptional
regulator - Parvularcula bermudensis HTCC2503
Length = 205
Score = 38.3 bits (85), Expect = 0.25
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +2
Query: 134 NTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
N VI AAL LL E GV G+T R+ A R GV A HF + R
Sbjct: 20 NAVIDAALALLEEKGVEGVTLRQCAARAGVSHGAPGHHFGDLR 62
>UniRef50_A3TPZ3 Cluster: Possible transcriptional regulatory
protein; n=1; Janibacter sp. HTCC2649|Rep: Possible
transcriptional regulatory protein - Janibacter sp.
HTCC2649
Length = 203
Score = 38.3 bits (85), Expect = 0.25
Identities = 22/52 (42%), Positives = 30/52 (57%)
Frame = +2
Query: 104 KVSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
K +S T L+ +I AA DL E G G+T +LAER+GV + +Y NK
Sbjct: 11 KAASATSLRER-IIEAASDLTIEQGWSGVTMSRLAERVGVSRQTIYNEVGNK 61
>UniRef50_A0VBN2 Cluster: Transcriptional regulator, TetR family;
n=4; cellular organisms|Rep: Transcriptional regulator,
TetR family - Delftia acidovorans SPH-1
Length = 256
Score = 38.3 bits (85), Expect = 0.25
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
V++AA L NE G + +A RLGV +P LY++ +NK
Sbjct: 50 VLQAAAQLFNERGFSATSLDDIAARLGVSKPTLYYYVKNK 89
>UniRef50_Q8TLS7 Cluster: Transcriptional regulator, TetR family;
n=3; Methanomicrobia|Rep: Transcriptional regulator,
TetR family - Methanosarcina acetivorans
Length = 221
Score = 38.3 bits (85), Expect = 0.25
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ A L+++ E G T +A RL V +PALY +F+NK
Sbjct: 19 IVEAGLEVMYEKGYCNTTMEDIARRLDVSKPALYRYFKNK 58
>UniRef50_Q8RER3 Cluster: Transcriptional regulator, TetR family;
n=2; Fusobacterium nucleatum|Rep: Transcriptional
regulator, TetR family - Fusobacterium nucleatum subsp.
nucleatum
Length = 205
Score = 37.9 bits (84), Expect = 0.33
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I+ ++L+NEVG L+ RKLA GV A Y HF++K
Sbjct: 21 LIKKGIELINEVGENKLSLRKLAIICGVSNSAPYTHFKSK 60
>UniRef50_Q88ZN5 Cluster: Transcription regulator; n=1;
Lactobacillus plantarum|Rep: Transcription regulator -
Lactobacillus plantarum
Length = 229
Score = 37.9 bits (84), Expect = 0.33
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +2
Query: 104 KVSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
K +T+ Q ++ AALDL E G + TR++AER GV + L+ +F NK
Sbjct: 17 KDGRITRTQ-RQILAAALDLFAEKGYEEVGTREIAERAGVAEGTLFHNFVNK 67
>UniRef50_Q6N4N7 Cluster: Possible transcriptional regulator, TetR
family; n=3; Rhodopseudomonas palustris|Rep: Possible
transcriptional regulator, TetR family -
Rhodopseudomonas palustris
Length = 248
Score = 37.9 bits (84), Expect = 0.33
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
V+R A+ L E G T ++AERL + +PALY +FR+K
Sbjct: 17 VLRTAVHLFLEQGYHRATLNEVAERLNITKPALYNYFRSK 56
>UniRef50_Q6D8M2 Cluster: TetR-family transcriptional regulator;
n=24; Proteobacteria|Rep: TetR-family transcriptional
regulator - Erwinia carotovora subsp. atroseptica
(Pectobacterium atrosepticum)
Length = 199
Score = 37.9 bits (84), Expect = 0.33
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I+AA ++ E G LT LAE+ GV +P +Y HF N+
Sbjct: 19 LIQAAWQIIREEGTEALTLGHLAEQAGVTKPVVYDHFTNR 58
>UniRef50_Q9RP98 Cluster: Regulatory protein; n=2; Streptomyces|Rep:
Regulatory protein - Streptomyces fradiae
Length = 187
Score = 37.9 bits (84), Expect = 0.33
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 152 ALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
AL+L E G + R +AERL V +PA+Y+HF+ K
Sbjct: 15 ALELFVEQGYEKTSLRGIAERLNVTKPAIYYHFQTK 50
>UniRef50_Q1N3H1 Cluster: Transcription regulator, TetR family
protein; n=1; Oceanobacter sp. RED65|Rep: Transcription
regulator, TetR family protein - Oceanobacter sp. RED65
Length = 211
Score = 37.9 bits (84), Expect = 0.33
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ A+++++ GV L+ RKLA+ +GV + A Y HF++K
Sbjct: 27 LLNASVEIIRSQGVSALSLRKLADMVGVSRTAPYHHFKDK 66
>UniRef50_Q0SCA1 Cluster: Transcriptional regulator, TetR family
protein; n=1; Rhodococcus sp. RHA1|Rep: Transcriptional
regulator, TetR family protein - Rhodococcus sp. (strain
RHA1)
Length = 236
Score = 37.9 bits (84), Expect = 0.33
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
LQ ++AA +L G GLT R+L E L V LY FR+K
Sbjct: 22 LQQEAAVKAAFELARRDGAAGLTMRRLGEELKVDATTLYRLFRDK 66
>UniRef50_Q03ZI0 Cluster: Transcriptional regulator; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Transcriptional regulator - Leuconostoc
mesenteroides subsp. mesenteroides (strain ATCC 8293
/NCDO 523)
Length = 194
Score = 37.9 bits (84), Expect = 0.33
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +2
Query: 104 KVSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+V S + + +I AA + G TTR +A+++ + QPALY HF +K
Sbjct: 3 QVISQNEHRRQQIIEAATTIFLSKGFEQTTTRDIAKKVNISQPALYHHFGDK 54
>UniRef50_A6Q3N1 Cluster: Transcriptional regulator, TetR family;
n=1; Nitratiruptor sp. SB155-2|Rep: Transcriptional
regulator, TetR family - Nitratiruptor sp. (strain
SB155-2)
Length = 207
Score = 37.9 bits (84), Expect = 0.33
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AALDL+ E G + R +A+ +G+++ A+Y HF NK
Sbjct: 17 ILDAALDLIAEHGYSKASVRMIAKAVGIRESAIYNHFANK 56
>UniRef50_A4Y017 Cluster: Transcriptional regulator, TetR family;
n=19; Gammaproteobacteria|Rep: Transcriptional
regulator, TetR family - Pseudomonas mendocina ymp
Length = 245
Score = 37.9 bits (84), Expect = 0.33
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 110 SSMTKLQPNT---VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
SS P T ++ +L L N G +TT +A LG+ LY+HFRNK+
Sbjct: 24 SSCVMAPPKTRDRIVAESLALFNGQGERNVTTNHIAAHLGISPGNLYYHFRNKQ 77
>UniRef50_A4TZZ4 Cluster: Regulatory protein, TetR; n=1;
Magnetospirillum gryphiswaldense|Rep: Regulatory
protein, TetR - Magnetospirillum gryphiswaldense
Length = 198
Score = 37.9 bits (84), Expect = 0.33
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I AL L E+G +T +A RLG+ QPA++ HF K
Sbjct: 14 IIETALLLAAELGPDRITAEAIANRLGISQPAIFKHFPRK 53
>UniRef50_A3PUZ9 Cluster: Transcriptional regulator, TetR family;
n=3; Mycobacterium|Rep: Transcriptional regulator, TetR
family - Mycobacterium sp. (strain JLS)
Length = 195
Score = 37.9 bits (84), Expect = 0.33
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ A+ LN+ GV LTTR++AER G PA+Y F +K
Sbjct: 15 LLEVAVATLNDEGVARLTTRRVAERAGTSVPAVYELFDDK 54
>UniRef50_A1T5J2 Cluster: Transcriptional regulator, TetR family;
n=2; Mycobacterium|Rep: Transcriptional regulator, TetR
family - Mycobacterium vanbaalenii (strain DSM 7251 /
PYR-1)
Length = 189
Score = 37.9 bits (84), Expect = 0.33
Identities = 16/40 (40%), Positives = 28/40 (70%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
V+ +AL+L + GV G + + +A+RLGV + A+Y+ F +K
Sbjct: 15 VLESALELFADHGVSGTSLQMIADRLGVTKAAVYYQFHSK 54
>UniRef50_A0W7Y5 Cluster: Transcriptional regulator, TetR family
precursor; n=1; Geobacter lovleyi SZ|Rep:
Transcriptional regulator, TetR family precursor -
Geobacter lovleyi SZ
Length = 200
Score = 37.9 bits (84), Expect = 0.33
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AAL L + G + R+L E GV +P LY++F+NK
Sbjct: 17 LLDAALQLFSSKGYAATSVRELVEAAGVTKPVLYYYFKNK 56
>UniRef50_Q828S3 Cluster: Putative TetR-family transcriptional
regulator; n=2; Streptomyces|Rep: Putative TetR-family
transcriptional regulator - Streptomyces avermitilis
Length = 206
Score = 37.5 bits (83), Expect = 0.44
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
++ A DLL+EVG L+TR +A R GV ++Y F NKR
Sbjct: 26 ILDACADLLDEVGYDALSTRAVALRAGVPIGSVYRFFGNKR 66
>UniRef50_Q81U36 Cluster: Transcriptional regulator, TetR family;
n=9; Bacillus cereus group|Rep: Transcriptional
regulator, TetR family - Bacillus anthracis
Length = 193
Score = 37.5 bits (83), Expect = 0.44
Identities = 17/50 (34%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = +2
Query: 116 MTK-LQPN-TVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
MTK LQ + ++ A+ L+ E G+ ++ +A+ +G+ +PA+Y+HF +K
Sbjct: 1 MTKNLQTSQNIVEASFKLMAEHGIEKMSLSMIAKEVGISKPAIYYHFSSK 50
>UniRef50_Q3A7U8 Cluster: TetR family transcriptional regulator;
n=1; Pelobacter carbinolicus DSM 2380|Rep: TetR family
transcriptional regulator - Pelobacter carbinolicus
(strain DSM 2380 / Gra Bd 1)
Length = 186
Score = 37.5 bits (83), Expect = 0.44
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 134 NTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+ ++RAALDL E G T +A+R GV L+ HF+NK
Sbjct: 9 SALLRAALDLFAENGFNASPTSLIAKRAGVASGTLFVHFKNK 50
>UniRef50_Q30RP7 Cluster: Transcriptional regulator, TetR family;
n=1; Thiomicrospira denitrificans ATCC 33889|Rep:
Transcriptional regulator, TetR family - Thiomicrospira
denitrificans (strain ATCC 33889 / DSM 1351)
Length = 205
Score = 37.5 bits (83), Expect = 0.44
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+++++ L +E G + RK+A +G+++ ALY HF+NK
Sbjct: 17 ILKSSSKLFSEHGFKATSVRKIASEVGIRESALYNHFKNK 56
>UniRef50_Q7D614 Cluster: Transcriptional regulator, TetR family;
n=8; Mycobacterium tuberculosis complex|Rep:
Transcriptional regulator, TetR family - Mycobacterium
tuberculosis
Length = 225
Score = 37.5 bits (83), Expect = 0.44
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
++ AA +L+ G +TR +A +GV+QPA+Y HF KR
Sbjct: 27 ILGAAAELIALRGYSSTSTRDIAAAVGVEQPAIYKHFSAKR 67
>UniRef50_Q3W8V8 Cluster: Regulatory protein, TetR:Tetracyclin
repressor, C-terminal; n=1; Frankia sp. EAN1pec|Rep:
Regulatory protein, TetR:Tetracyclin repressor,
C-terminal - Frankia sp. EAN1pec
Length = 242
Score = 37.5 bits (83), Expect = 0.44
Identities = 25/95 (26%), Positives = 42/95 (44%)
Frame = +2
Query: 110 SSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXX 289
+S L ++ AL++ + G+ ++ R++A LGV LY H ++K
Sbjct: 20 ASRAGLSRERIVAVALEIADAEGLDAVSMRRVAAMLGVGTMTLYTHVQDKE---ALLELM 76
Query: 290 XXXXNHTHSVPRADDDWRSFLIGNARSFRQALLAY 394
H + DWR+ L AR RQ+LL +
Sbjct: 77 LDALTAEHLLAGTGPDWRTGLTRIARLTRQSLLRH 111
>UniRef50_Q0LEE0 Cluster: Regulatory protein, TetR; n=1;
Herpetosiphon aurantiacus ATCC 23779|Rep: Regulatory
protein, TetR - Herpetosiphon aurantiacus ATCC 23779
Length = 191
Score = 37.5 bits (83), Expect = 0.44
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AL+L N+ G ++T +AE + LY+HFRNK
Sbjct: 7 ILSTALELFNQKGTAEVSTNHIAEACSISPGNLYYHFRNK 46
>UniRef50_A6F2N8 Cluster: Transcriptional regulator; n=1;
Marinobacter algicola DG893|Rep: Transcriptional
regulator - Marinobacter algicola DG893
Length = 212
Score = 37.5 bits (83), Expect = 0.44
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 131 PNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHF 250
P + AL++L E G ++ R LA+++GV PALY HF
Sbjct: 18 PQQAHQLALEILREHGDAAISLRALAKQIGVSAPALYRHF 57
>UniRef50_A5VLL5 Cluster: Transcriptional regulator, TetR family;
n=2; Lactobacillus reuteri|Rep: Transcriptional
regulator, TetR family - Lactobacillus reuteri F275
Length = 200
Score = 37.5 bits (83), Expect = 0.44
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+++ A L + G +TR +A+++G+ QPALY HF +K
Sbjct: 14 ILKTATKLFLQKGFGETSTRDIAKQIGITQPALYHHFSDK 53
>UniRef50_A4F5U4 Cluster: TetR-family transcriptional regulator;
n=2; Actinomycetales|Rep: TetR-family transcriptional
regulator - Saccharopolyspora erythraea (strain NRRL
23338)
Length = 192
Score = 37.5 bits (83), Expect = 0.44
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
++ A L++EVG GL+T +AER GV +LY F +KR
Sbjct: 1 MLEACAQLIDEVGYDGLSTTLIAERAGVAVGSLYQFFPDKR 41
>UniRef50_A3HSQ5 Cluster: Putative uncharacterized protein; n=1;
Algoriphagus sp. PR1|Rep: Putative uncharacterized
protein - Algoriphagus sp. PR1
Length = 225
Score = 37.5 bits (83), Expect = 0.44
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+++ LL E+G+ T +KL+E++G +PA+Y +F NK
Sbjct: 30 IVKEGSKLLLELGMEHFTFKKLSEKIGGTEPAIYRYFENK 69
>UniRef50_A1U6A9 Cluster: Transcriptional regulator, TetR family;
n=1; Marinobacter aquaeolei VT8|Rep: Transcriptional
regulator, TetR family - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 238
Score = 37.5 bits (83), Expect = 0.44
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 104 KVSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
K + + +++ AA + E GV + ++A GV + A+YWHFRNK+
Sbjct: 40 KTKAEAEATRESLLDAAESVFMEKGVARASLEEIARTAGVTRGAVYWHFRNKQ 92
>UniRef50_A1U599 Cluster: Transcriptional regulator, TetR family
precursor; n=1; Marinobacter aquaeolei VT8|Rep:
Transcriptional regulator, TetR family precursor -
Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 /
VT8)(Marinobacter hydrocarbonoclasticus (strain DSM
11845))
Length = 212
Score = 37.5 bits (83), Expect = 0.44
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 119 TKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
T+L+ + I A + L E LTT ++A+ +G+ Q AL+ HF NK
Sbjct: 15 TELRQSATIEAVVQLCAEQDPATLTTARIADEVGLSQGALFKHFPNK 61
>UniRef50_A0PL09 Cluster: Transcriptional regulator; n=4;
Mycobacterium|Rep: Transcriptional regulator -
Mycobacterium ulcerans (strain Agy99)
Length = 179
Score = 37.5 bits (83), Expect = 0.44
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +2
Query: 152 ALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
A +L GV G + + +A+RLG+ +PALY+HF ++
Sbjct: 17 ARELFLRQGVRGTSLQDIADRLGITKPALYYHFASR 52
>UniRef50_A0JS18 Cluster: Transcriptional regulator, TetR family;
n=4; Actinomycetales|Rep: Transcriptional regulator,
TetR family - Arthrobacter sp. (strain FB24)
Length = 239
Score = 37.5 bits (83), Expect = 0.44
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
L + V+ AA+ L + G+ L+ R+LA+ LGV ALY H NK
Sbjct: 13 LNRDRVLTAAVVLADAAGIESLSMRRLAQELGVVPMALYKHVANK 57
>UniRef50_Q9KFW7 Cluster: BH0353 protein; n=1; Bacillus
halodurans|Rep: BH0353 protein - Bacillus halodurans
Length = 197
Score = 37.1 bits (82), Expect = 0.58
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I AA + E G+ LT + +AE GV Q +Y+HFR+K
Sbjct: 12 LIEAAKRCIVEKGIHSLTLKSVAEGAGVTQGTVYYHFRSK 51
>UniRef50_Q9CFG3 Cluster: Transcriptional regulator; n=4;
Lactococcus lactis|Rep: Transcriptional regulator -
Lactococcus lactis subsp. lactis (Streptococcus lactis)
Length = 208
Score = 37.1 bits (82), Expect = 0.58
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +2
Query: 119 TKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
T+ + +I ++ +LL E+ + + RKLA RLG+ +LY+HF +K
Sbjct: 3 TQPTKDKIISSSWELLEELTLTEFSMRKLASRLGMTVSSLYYHFSSK 49
>UniRef50_Q8YQT9 Cluster: Transcriptional regulator; n=2;
Nostocaceae|Rep: Transcriptional regulator - Anabaena
sp. (strain PCC 7120)
Length = 192
Score = 37.1 bits (82), Expect = 0.58
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 101 DKVSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+K KL+ I A L +L E G+ + LA+ + V + + YWHF+N+
Sbjct: 8 EKKQEHIKLERQDWINAGLKVLAEGGIEAVRVEPLAKLIKVTKGSFYWHFKNR 60
>UniRef50_Q6D8M6 Cluster: TetR-family transcriptional regulator;
n=1; Pectobacterium atrosepticum|Rep: TetR-family
transcriptional regulator - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 190
Score = 37.1 bits (82), Expect = 0.58
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +2
Query: 119 TKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHF 250
TK + ++ A++L E G+ +TTR+LAE +G+ + LY +F
Sbjct: 5 TKALKDKILDGAIELFIEKGIEKVTTRELAEHVGISRSHLYHYF 48
>UniRef50_Q65LY1 Cluster: Putative uncharacterized protein; n=1;
Bacillus licheniformis ATCC 14580|Rep: Putative
uncharacterized protein - Bacillus licheniformis (strain
DSM 13 / ATCC 14580)
Length = 198
Score = 37.1 bits (82), Expect = 0.58
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
+I+AAL L E G +TR++A++ GV L+ HF NK+
Sbjct: 10 LIQAALALFKEKGYQAASTREIAQKAGVNHLTLFRHFGNKQ 50
>UniRef50_Q5YWR1 Cluster: Putative transcriptional regulator; n=1;
Nocardia farcinica|Rep: Putative transcriptional
regulator - Nocardia farcinica
Length = 228
Score = 37.1 bits (82), Expect = 0.58
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
KL ++ AA+ L +E G+ L+ R++A+R+GV +LY H K
Sbjct: 9 KLSREAIVDAAIALADEDGLDALSMRRIADRMGVGAMSLYRHVAGK 54
>UniRef50_Q3SGW2 Cluster: Possible Transcriptional Regulator, TetR
family; n=1; Thiobacillus denitrificans ATCC 25259|Rep:
Possible Transcriptional Regulator, TetR family -
Thiobacillus denitrificans (strain ATCC 25259)
Length = 181
Score = 37.1 bits (82), Expect = 0.58
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +2
Query: 155 LDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++++ GV LTTR L++ +G+ QP L+ HF +K
Sbjct: 1 MEIIRHEGVAKLTTRSLSQAVGIAQPTLFLHFGSK 35
>UniRef50_Q1AV27 Cluster: Transcriptional regulator, TetR family;
n=1; Rubrobacter xylanophilus DSM 9941|Rep:
Transcriptional regulator, TetR family - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 198
Score = 37.1 bits (82), Expect = 0.58
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++RA +L+ E G GLT +++AER + + Y HFR++
Sbjct: 25 ILRAFAELIEEKGHAGLTVQEIAERATINRATFYAHFRDQ 64
>UniRef50_A7B9X0 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 262
Score = 37.1 bits (82), Expect = 0.58
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +2
Query: 137 TVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+++ AA+ L+ E G G + R L R+G+ PA+ +HF +K
Sbjct: 20 SILSAAMVLIAERGYNGFSLRDLGRRVGISHPAVVYHFPSK 60
>UniRef50_A6Q5T5 Cluster: Transcriptional regulator, TetR family;
n=1; Nitratiruptor sp. SB155-2|Rep: Transcriptional
regulator, TetR family - Nitratiruptor sp. (strain
SB155-2)
Length = 201
Score = 37.1 bits (82), Expect = 0.58
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AL L N+ G ++T +A+ G+ LY+HFRNK
Sbjct: 7 ILFQALKLFNQFGTKDISTNHIAKATGISPGNLYYHFRNK 46
>UniRef50_A5NW51 Cluster: Transcriptional regulator, TetR family;
n=1; Methylobacterium sp. 4-46|Rep: Transcriptional
regulator, TetR family - Methylobacterium sp. 4-46
Length = 978
Score = 37.1 bits (82), Expect = 0.58
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +2
Query: 134 NTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+ +++AA+ L NE GV G T ++A R+G+ ++ ++FR K
Sbjct: 590 DAILQAAVALFNEAGVKGATLSEVARRVGLMTNSVTYYFRRK 631
>UniRef50_A5NUB0 Cluster: Transcriptional regulator, TetR family;
n=2; Alphaproteobacteria|Rep: Transcriptional regulator,
TetR family - Methylobacterium sp. 4-46
Length = 221
Score = 37.1 bits (82), Expect = 0.58
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHF 250
++RAALD + EVG TT+++AER V + AL HF
Sbjct: 19 LVRAALDEIFEVGYHAATTQQIAERARVSRGALLHHF 55
>UniRef50_A4X437 Cluster: Regulatory protein, TetR; n=2;
Salinispora|Rep: Regulatory protein, TetR - Salinispora
tropica CNB-440
Length = 227
Score = 37.1 bits (82), Expect = 0.58
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 119 TKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
T L T+I +A +L + G+ +T R+LA R GV A+Y HF +K
Sbjct: 12 TPLSRATLIASATELADSEGLQAVTIRQLAHRHGVTAMAIYAHFDDK 58
>UniRef50_A4IL55 Cluster: Transcriptional regulator TetR family;
n=1; Geobacillus thermodenitrificans NG80-2|Rep:
Transcriptional regulator TetR family - Geobacillus
thermodenitrificans (strain NG80-2)
Length = 190
Score = 37.1 bits (82), Expect = 0.58
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
K+ N + LL E G G T LAERLGV + A+Y +F NK
Sbjct: 6 KISLNELFAQTKQLLLEHGYEGFTFGLLAERLGVARSAIYKYFENK 51
>UniRef50_A3VB16 Cluster: Putative uncharacterized protein; n=1;
Rhodobacterales bacterium HTCC2654|Rep: Putative
uncharacterized protein - Rhodobacterales bacterium
HTCC2654
Length = 224
Score = 37.1 bits (82), Expect = 0.58
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 143 IRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
I AALD E G G +T+ +AER G+ + ++ HF +K+
Sbjct: 35 ILAALDCFAEFGFDGTSTKMIAERAGIGEATIFRHFPSKK 74
>UniRef50_A3J8M4 Cluster: Transcriptional regulator; n=4;
Gammaproteobacteria|Rep: Transcriptional regulator -
Marinobacter sp. ELB17
Length = 234
Score = 37.1 bits (82), Expect = 0.58
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+++++L L N+ G ++T +A L + LY+HFRNK
Sbjct: 18 ILQSSLQLFNQSGERAISTNHIAAELAISPGNLYYHFRNK 57
>UniRef50_A1SD79 Cluster: Regulatory protein, TetR; n=1;
Nocardioides sp. JS614|Rep: Regulatory protein, TetR -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 211
Score = 37.1 bits (82), Expect = 0.58
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ L++ E G G T + ER G+ ++YWHF+NK
Sbjct: 19 ILATTLEIAAERGYEGTTVGLVTERTGLPASSVYWHFKNK 58
>UniRef50_P39897 Cluster: HTH-type transcriptional regulator mtrR;
n=10; Neisseria|Rep: HTH-type transcriptional regulator
mtrR - Neisseria gonorrhoeae
Length = 210
Score = 37.1 bits (82), Expect = 0.58
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 149 AALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
AAL+ G+ + ++A+ GV + ALYWHF+NK
Sbjct: 18 AALETFYRKGIARTSLNEIAQAAGVTRGALYWHFKNK 54
>UniRef50_Q928H4 Cluster: Lin2558 protein; n=13; Listeria|Rep:
Lin2558 protein - Listeria innocua
Length = 202
Score = 36.7 bits (81), Expect = 0.77
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ A DL E G ++TR++A+ + QPALY HF +K
Sbjct: 18 ILDTARDLFMEKGYRAVSTREIAKIAKITQPALYHHFEDK 57
>UniRef50_Q88XZ4 Cluster: Transcription regulator; n=2;
Lactobacillus|Rep: Transcription regulator -
Lactobacillus plantarum
Length = 200
Score = 36.7 bits (81), Expect = 0.77
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 95 ISDKVSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ + M K ++ A +L G +TR +A +G+ QPALY HF++K
Sbjct: 1 MATRAEQMAKTH-QAILDTARELFLRNGYDATSTRDIANAIGITQPALYHHFKDK 54
>UniRef50_Q7P0X9 Cluster: Acrab operon repressor; n=1;
Chromobacterium violaceum|Rep: Acrab operon repressor -
Chromobacterium violaceum
Length = 215
Score = 36.7 bits (81), Expect = 0.77
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AA L +E GV T ++A G+ + A+YWHF+NK
Sbjct: 16 LLDAAEQLFSEQGVSRTTLAEIATAAGLTRGAVYWHFQNK 55
>UniRef50_Q2SD10 Cluster: Transcriptional regulator; n=1; Hahella
chejuensis KCTC 2396|Rep: Transcriptional regulator -
Hahella chejuensis (strain KCTC 2396)
Length = 219
Score = 36.7 bits (81), Expect = 0.77
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 107 VSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
V ++ + ++ A L++EVGV G T ++A R G+ +LY +F NK
Sbjct: 24 VQERSRERVELILNEAAILISEVGVQGAKTSEIARRAGISLASLYRYFPNK 74
>UniRef50_Q1LBM4 Cluster: Transcriptional regulator, TetR family;
n=1; Ralstonia metallidurans CH34|Rep: Transcriptional
regulator, TetR family - Ralstonia metallidurans (strain
CH34 / ATCC 43123 / DSM 2839)
Length = 233
Score = 36.7 bits (81), Expect = 0.77
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I AAL L G G +TR +A GV PAL ++F NK
Sbjct: 22 IIDAALRLFGTHGFDGASTRDIAREAGVNAPALQYYFDNK 61
>UniRef50_Q0M1I1 Cluster: Regulatory protein, TetR; n=1; Caulobacter
sp. K31|Rep: Regulatory protein, TetR - Caulobacter sp.
K31
Length = 233
Score = 36.7 bits (81), Expect = 0.77
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
V+ A ++L E G LTT + +R G+ PALY +F NK
Sbjct: 34 VLATAGEMLRETGFEQLTTNAICKRAGLTPPALYRYFPNK 73
>UniRef50_Q03CU8 Cluster: Transcriptional regulator; n=1;
Lactobacillus casei ATCC 334|Rep: Transcriptional
regulator - Lactobacillus casei (strain ATCC 334)
Length = 215
Score = 36.7 bits (81), Expect = 0.77
Identities = 23/92 (25%), Positives = 40/92 (43%)
Frame = +2
Query: 119 TKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXX 298
T L + +++ AL+LL++ + T RKL + + V A+Y +F N+
Sbjct: 9 TTLSRSYILQVALELLDQEDLQKFTMRKLGQEMSVSPMAVYRYFPNQEALFDGLVEMLWQ 68
Query: 299 XNHTHSVPRADDDWRSFLIGNARSFRQALLAY 394
A+ W+ + G RQ LLA+
Sbjct: 69 RVLVLDQDAANATWQDQVTGLMSRLRQTLLAH 100
>UniRef50_A6VUY6 Cluster: Transcriptional regulator, TetR family;
n=3; Oceanospirillaceae|Rep: Transcriptional regulator,
TetR family - Marinomonas sp. MWYL1
Length = 200
Score = 36.7 bits (81), Expect = 0.77
Identities = 16/41 (39%), Positives = 28/41 (68%)
Frame = +2
Query: 137 TVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+++ +A ++ E GV L+ RKLA+ +GV + A Y HF++K
Sbjct: 16 SLLESASLIIKEQGVESLSMRKLADTVGVSRTAPYHHFKDK 56
>UniRef50_A6GE02 Cluster: Transcriptional regulator, TetR family
protein; n=1; Plesiocystis pacifica SIR-1|Rep:
Transcriptional regulator, TetR family protein -
Plesiocystis pacifica SIR-1
Length = 199
Score = 36.7 bits (81), Expect = 0.77
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ ALDL E+G+ GL+ +A+++G+ + LY HF +K
Sbjct: 11 ILSQALDLSTEIGLEGLSIGVIAKQVGMSKSGLYAHFDSK 50
>UniRef50_A5NWI2 Cluster: Transcriptional regulator, TetR family;
n=1; Methylobacterium sp. 4-46|Rep: Transcriptional
regulator, TetR family - Methylobacterium sp. 4-46
Length = 220
Score = 36.7 bits (81), Expect = 0.77
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 146 RAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
RA L LL G ++ R+LA +G+QQ +LY +FRNK+
Sbjct: 18 RAGLQLLYTHGYAAMSLRQLAGVVGIQQGSLYNYFRNKQ 56
>UniRef50_A4VL13 Cluster: Transcriptional regulator TtgR; n=1;
Pseudomonas stutzeri A1501|Rep: Transcriptional
regulator TtgR - Pseudomonas stutzeri (strain A1501)
Length = 213
Score = 36.7 bits (81), Expect = 0.77
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I AAL+L + G T +AE G + +YWHF++K
Sbjct: 15 IIAAALELFSRNGYSNTTLAMIAEAAGFSRGPIYWHFKSK 54
>UniRef50_A1UNG4 Cluster: Transcriptional regulator, TetR family;
n=8; Corynebacterineae|Rep: Transcriptional regulator,
TetR family - Mycobacterium sp. (strain KMS)
Length = 189
Score = 36.7 bits (81), Expect = 0.77
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 146 RAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
RAA+D+LN G GLT R++A GV Y +F +K
Sbjct: 26 RAAVDILNRDGFSGLTVRRVAAEAGVGAATAYTYFSSK 63
>UniRef50_A0UQS1 Cluster: Transcriptional regulator, TetR family;
n=8; Burkholderia cepacia complex|Rep: Transcriptional
regulator, TetR family - Burkholderia multivorans ATCC
17616
Length = 223
Score = 36.7 bits (81), Expect = 0.77
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
L ++ AAL LL VG + RKLA+ +G ++ +HF++K
Sbjct: 12 LDKEAIVAAALALLETVGEAAFSVRKLAQSIGCDPMSVLYHFKSK 56
>UniRef50_A0R315 Cluster: TetR-family protein transcriptional
regulator; n=1; Mycobacterium smegmatis str. MC2
155|Rep: TetR-family protein transcriptional regulator -
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Length = 237
Score = 36.7 bits (81), Expect = 0.77
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 104 KVSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
K +S ++ AA DLL G+ ++TR +A GVQ P +Y F +K
Sbjct: 3 KATSSVLPPAERILAAAADLLRAGGIDAVSTRAVATEAGVQPPTIYRQFGDK 54
>UniRef50_A0GIX8 Cluster: Transcriptional regulator, TetR family;
n=1; Burkholderia phytofirmans PsJN|Rep: Transcriptional
regulator, TetR family - Burkholderia phytofirmans PsJN
Length = 213
Score = 36.7 bits (81), Expect = 0.77
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +2
Query: 137 TVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
TV+ AA +L G+ G TT +AER GV +LY +F N+
Sbjct: 27 TVLEAAARILETRGLEGYTTNAVAERAGVSIGSLYQYFPNR 67
>UniRef50_Q9R9T9 Cluster: HTH-type transcriptional regulator srpR;
n=2; Pseudomonas putida|Rep: HTH-type transcriptional
regulator srpR - Pseudomonas putida
Length = 213
Score = 36.7 bits (81), Expect = 0.77
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I AAL++ GV T ++A + GV + A+YWHF K
Sbjct: 16 IIDAALEVFVAQGVSDATLDQIARKAGVTRGAVYWHFNGK 55
>UniRef50_UPI000051045B Cluster: COG1309: Transcriptional regulator;
n=1; Brevibacterium linens BL2|Rep: COG1309:
Transcriptional regulator - Brevibacterium linens BL2
Length = 221
Score = 36.3 bits (80), Expect = 1.0
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWH 247
+L V++AA+ +++ GV LT R+L LGV+ ALY H
Sbjct: 5 RLSRTDVVQAAIAFIDDNGVQALTMRRLGAALGVEAMALYRH 46
>UniRef50_Q89SZ6 Cluster: Transcriptional regulatory protein; n=1;
Bradyrhizobium japonicum|Rep: Transcriptional regulatory
protein - Bradyrhizobium japonicum
Length = 231
Score = 36.3 bits (80), Expect = 1.0
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AL+L + G G + R+LA R+G+++ +LY HF K
Sbjct: 20 ILSEALNLFAQSGYGGASMRELARRVGIRESSLYNHFAGK 59
>UniRef50_Q7TYZ3 Cluster: Putative uncharacterized protein Mb2184c;
n=8; Mycobacterium tuberculosis complex|Rep: Putative
uncharacterized protein Mb2184c - Mycobacterium bovis
Length = 206
Score = 36.3 bits (80), Expect = 1.0
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++RAA+D+ + G+ GL+ +LA RLG+ + L+ HF K
Sbjct: 14 ILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAK 53
>UniRef50_Q79FG9 Cluster: Putative uncharacterized protein; n=2;
Mycobacterium tuberculosis|Rep: Putative uncharacterized
protein - Mycobacterium tuberculosis
Length = 211
Score = 36.3 bits (80), Expect = 1.0
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++RAA+D+ + G+ GL+ +LA RLG+ + L+ HF K
Sbjct: 14 ILRAAMDIASVKGLSGLSIGELAGRLGMSKSGLFRHFGAK 53
>UniRef50_Q74EL1 Cluster: Transcriptional regulator, TetR family;
n=5; Desulfuromonadales|Rep: Transcriptional regulator,
TetR family - Geobacter sulfurreducens
Length = 196
Score = 36.3 bits (80), Expect = 1.0
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +2
Query: 119 TKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
T+++ +++A+L ++ E G +TT +AE G+ + +Y HF K
Sbjct: 7 TRIRKEEIVQASLRVIGERGANAMTTAAIAEAAGMSESNIYRHFGGK 53
>UniRef50_Q5YZ51 Cluster: Putative transcriptional regulator; n=1;
Nocardia farcinica|Rep: Putative transcriptional
regulator - Nocardia farcinica
Length = 262
Score = 36.3 bits (80), Expect = 1.0
Identities = 28/100 (28%), Positives = 40/100 (40%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXXNHTHSV 319
+ RAA+ L + G+ LT R+LA LGV ALY H+ ++
Sbjct: 57 IARAAVALADRDGIERLTLRRLAGDLGVATAALYRHYPDRDALLGAMTELVLAETEPPEA 116
Query: 320 PRADDDWRSFLIGNARSFRQALLAYRQHNGTMCSSCRSRP 439
DWR+ L +A + YR H + R RP
Sbjct: 117 DSRPADWRAALTHDALT---EWRRYRTHPWLLPVLARIRP 153
>UniRef50_Q39PZ9 Cluster: Transcriptional regulator, TetR family;
n=2; Geobacter|Rep: Transcriptional regulator, TetR
family - Geobacter metallireducens (strain GS-15 / ATCC
53774 / DSM 7210)
Length = 200
Score = 36.3 bits (80), Expect = 1.0
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 119 TKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
T+++ + AAL ++ G+ G TT ++A G+ + LY HF+ K
Sbjct: 9 TEVRRQQITEAALRIIGTKGISGATTAEIASASGISEGNLYRHFKGK 55
>UniRef50_Q39DD1 Cluster: Transcriptional regulator, TetR family;
n=29; Burkholderia|Rep: Transcriptional regulator, TetR
family - Burkholderia sp. (strain 383) (Burkholderia
cepacia (strain ATCC 17760/ NCIB 9086 / R18194))
Length = 213
Score = 36.3 bits (80), Expect = 1.0
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 134 NTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
N ++ AA + E GV + +A+ GV + A+YWHF NK
Sbjct: 14 NRILDAAEHVFFEKGVSHTSLADIAQHAGVTRGAIYWHFANK 55
>UniRef50_Q2RH86 Cluster: Transcriptional regulator, TetR family;
n=1; Moorella thermoacetica ATCC 39073|Rep:
Transcriptional regulator, TetR family - Moorella
thermoacetica (strain ATCC 39073)
Length = 197
Score = 36.3 bits (80), Expect = 1.0
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = +2
Query: 104 KVSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
K +S T+ Q +I AA+D++ + G+ LTT +A+ +G + A++ HF K
Sbjct: 4 KETSATRQQQ--IIAAAMDIIAKRGLANLTTAAIAQEVGFSEGAIFKHFPGK 53
>UniRef50_Q3W8J2 Cluster: Regulatory protein, TetR; n=1; Frankia sp.
EAN1pec|Rep: Regulatory protein, TetR - Frankia sp.
EAN1pec
Length = 204
Score = 36.3 bits (80), Expect = 1.0
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AL+L + G ++ R++AER+ + ALY+HF +K
Sbjct: 18 ILDVALELFSTAGYEAVSLREIAERMNFTKAALYYHFSSK 57
>UniRef50_Q2AGQ8 Cluster: Regulatory protein, TetR; n=1;
Halothermothrix orenii H 168|Rep: Regulatory protein,
TetR - Halothermothrix orenii H 168
Length = 186
Score = 36.3 bits (80), Expect = 1.0
Identities = 13/40 (32%), Positives = 28/40 (70%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AAL L ++ G +TT++++E+ GV + ++ HF++K
Sbjct: 10 ILTAALKLFSKKGYSNVTTKEISEKAGVNEVTIFRHFKSK 49
>UniRef50_Q1AYW4 Cluster: Transcriptional regulator, TetR family;
n=1; Rubrobacter xylanophilus DSM 9941|Rep:
Transcriptional regulator, TetR family - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 207
Score = 36.3 bits (80), Expect = 1.0
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPAL-YWHFRNK 259
++ AA + + G G T + +AE G+Q PAL YW+F +K
Sbjct: 11 ILEAAFEEFSAKGFRGATIKSIAEAAGLQSPALIYWYFPDK 51
>UniRef50_Q12BX8 Cluster: Transcriptional regulator, TetR family;
n=3; Comamonadaceae|Rep: Transcriptional regulator, TetR
family - Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 228
Score = 36.3 bits (80), Expect = 1.0
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 134 NTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
N ++ AA L GV + + +A R G + A+YWHFR+K
Sbjct: 14 NKLLDAAEHLFQAQGVSRTSLQDIARRAGATRGAIYWHFRDK 55
>UniRef50_Q025G7 Cluster: Transcriptional regulator, TetR family;
n=1; Solibacter usitatus Ellin6076|Rep: Transcriptional
regulator, TetR family - Solibacter usitatus (strain
Ellin6076)
Length = 210
Score = 36.3 bits (80), Expect = 1.0
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
++ ALDL + G G TT+++A GV + ++ HF NK+
Sbjct: 16 LLETALDLFSRKGFEGTTTKEIAAAAGVTEAIIFRHFPNKQ 56
>UniRef50_A6W681 Cluster: Tetracyclin repressor domain protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Tetracyclin
repressor domain protein - Kineococcus radiotolerans
SRS30216
Length = 204
Score = 36.3 bits (80), Expect = 1.0
Identities = 26/85 (30%), Positives = 37/85 (43%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXXNHTHSV 319
V+RAAL ++ G L +LA LGV +LY HFR R + +
Sbjct: 14 VLRAALAQIDATG--SLALPRLARDLGVGTSSLYHHFRGGREEVVEGIRGLLSTDAMPTQ 71
Query: 320 PRADDDWRSFLIGNARSFRQALLAY 394
+DWR+F A +R A A+
Sbjct: 72 RLPGEDWRAFTRRWATDYRTAYAAH 96
>UniRef50_A4XEM8 Cluster: Transcriptional regulator, TetR family;
n=1; Novosphingobium aromaticivorans DSM 12444|Rep:
Transcriptional regulator, TetR family - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 224
Score = 36.3 bits (80), Expect = 1.0
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AA+D L E G GLTT ++AER V + A++ HF +
Sbjct: 39 MLEAAVDCLVEGGYAGLTTAQVAERAQVSRGAMHHHFATR 78
>UniRef50_A4FFU4 Cluster: Putative TetR-family transcriptional
regulator; n=1; Saccharopolyspora erythraea NRRL
2338|Rep: Putative TetR-family transcriptional regulator
- Saccharopolyspora erythraea (strain NRRL 23338)
Length = 213
Score = 36.3 bits (80), Expect = 1.0
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 125 LQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
L + ++ AA L++ G+ TT+++A G + ALY HFR+K
Sbjct: 15 LTRSRILDAAARLMSTAGIVRTTTKEIARAAGCSEAALYKHFRDK 59
>UniRef50_A3VNI7 Cluster: Transcriptional regulatory protein; n=1;
Parvularcula bermudensis HTCC2503|Rep: Transcriptional
regulatory protein - Parvularcula bermudensis HTCC2503
Length = 230
Score = 36.3 bits (80), Expect = 1.0
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 77 GGHIMFISDK-VSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFR 253
G H+ ++K S + +I +AL L+ E G L+ + +R GV P+LY HF
Sbjct: 3 GEHLSDQAEKGASEAARNGREALIASALSLVKERGYAALSVSAICKRAGVSAPSLYHHFG 62
Query: 254 NK 259
+K
Sbjct: 63 DK 64
>UniRef50_A3TSX6 Cluster: TetR-family transcriptional regulator;
n=1; Oceanicola batsensis HTCC2597|Rep: TetR-family
transcriptional regulator - Oceanicola batsensis
HTCC2597
Length = 214
Score = 36.3 bits (80), Expect = 1.0
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+++ +R A + NE G + ++A+ +GV + ALY++F+NK
Sbjct: 27 EIKRRAALRVAARIFNEKGYHATSLDEIADEIGVTKTALYYYFKNK 72
>UniRef50_A1ZRG6 Cluster: Transcriptional regulator, TetR family;
n=1; Microscilla marina ATCC 23134|Rep: Transcriptional
regulator, TetR family - Microscilla marina ATCC 23134
Length = 209
Score = 36.3 bits (80), Expect = 1.0
Identities = 14/41 (34%), Positives = 28/41 (68%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
++ AL+L N+ G ++TR +A+ LG+ LY+H+++K+
Sbjct: 7 ILAKALELFNQHGSEKVSTRHVADALGISVGNLYYHYKDKQ 47
>UniRef50_A0R089 Cluster: Transcription regulator AmtR; n=2;
Corynebacterineae|Rep: Transcription regulator AmtR -
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Length = 225
Score = 36.3 bits (80), Expect = 1.0
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AA +L G +TR++A+ +GV+Q +LY HF K
Sbjct: 26 ILDAAAELFTTHGYGSTSTRRIADEVGVRQASLYHHFATK 65
>UniRef50_A0K260 Cluster: Transcriptional regulator, TetR family;
n=1; Arthrobacter sp. FB24|Rep: Transcriptional
regulator, TetR family - Arthrobacter sp. (strain FB24)
Length = 242
Score = 36.3 bits (80), Expect = 1.0
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++RAA +LL G ++TR++ + GV P LY HF +K
Sbjct: 13 LLRAAAELLANSGGAAVSTRQITQLAGVSAPTLYHHFGDK 52
>UniRef50_P0ACT1 Cluster: HTH-type transcriptional regulator acrR;
n=48; Enterobacteriaceae|Rep: HTH-type transcriptional
regulator acrR - Shigella flexneri
Length = 215
Score = 36.3 bits (80), Expect = 1.0
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AL L ++ GV + ++A+ GV + A+YWHF++K
Sbjct: 16 ILDVALRLFSQQGVSSTSLGEIAKAAGVTRGAIYWHFKDK 55
>UniRef50_Q98GZ7 Cluster: Transcriptional regulator; n=1;
Mesorhizobium loti|Rep: Transcriptional regulator -
Rhizobium loti (Mesorhizobium loti)
Length = 214
Score = 35.9 bits (79), Expect = 1.3
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
++ AA L+ E G GLT RKLA+R+G ++Y +F +K+
Sbjct: 20 LVAAAHKLVQEEGYEGLTIRKLAKRVGYAPMSVYSYFADKQ 60
>UniRef50_Q47L40 Cluster: TetR/AcrR family transcriptional
regulator; n=1; Thermobifida fusca YX|Rep: TetR/AcrR
family transcriptional regulator - Thermobifida fusca
(strain YX)
Length = 217
Score = 35.9 bits (79), Expect = 1.3
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+I+ A +L E G + +A+R+G +PA+Y++F++K
Sbjct: 35 IIKVATELFREKGYYATSLDDIADRIGFTKPAIYYYFKSK 74
>UniRef50_Q595S5 Cluster: TetR-type regulator; n=1; Streptomyces
tubercidicus|Rep: TetR-type regulator - Streptomyces
tubercidicus
Length = 212
Score = 35.9 bits (79), Expect = 1.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 149 AALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
AAL + E G+ + LA RLG + + YWHF N+
Sbjct: 28 AALAAMGEGGLAAVAVEPLAARLGTTKGSFYWHFANR 64
>UniRef50_Q1JVZ2 Cluster: Transcriptional regulator, TetR family;
n=1; Desulfuromonas acetoxidans DSM 684|Rep:
Transcriptional regulator, TetR family - Desulfuromonas
acetoxidans DSM 684
Length = 198
Score = 35.9 bits (79), Expect = 1.3
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2
Query: 122 KLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
K + + +I AA+DL +E G +T ++A V Q L++HF++K
Sbjct: 2 KCKKDQIIDAAIDLFSEQGFAETSTAEIAASSNVAQGTLFYHFKSK 47
>UniRef50_Q0RMZ4 Cluster: Putative TetR-family transcriptional
regulator; n=2; Frankia alni ACN14a|Rep: Putative
TetR-family transcriptional regulator - Frankia alni
(strain ACN14a)
Length = 202
Score = 35.9 bits (79), Expect = 1.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ +AL ++ GV GLT R+L++ LGV A Y H K
Sbjct: 29 IVASALSIIERDGVEGLTMRRLSQSLGVSLGATYKHVATK 68
>UniRef50_A7MRI4 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 219
Score = 35.9 bits (79), Expect = 1.3
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRN 256
+I AA+ L E G+ + TR L E LG+ + +Y +F+N
Sbjct: 39 IINAAIALFIEQGIENVKTRDLTEHLGISRSHIYHYFKN 77
>UniRef50_A7H959 Cluster: Transcriptional regulator, TetR family
precursor; n=1; Anaeromyxobacter sp. Fw109-5|Rep:
Transcriptional regulator, TetR family precursor -
Anaeromyxobacter sp. Fw109-5
Length = 201
Score = 35.9 bits (79), Expect = 1.3
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +2
Query: 143 IRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
I AA+ L E +TT +A+ +GV QPAL+ HF K
Sbjct: 17 IEAAVQLAGEQNPSDVTTGAIAQAMGVTQPALFRHFATK 55
>UniRef50_A6W9W2 Cluster: Transcriptional regulator, TetR family;
n=3; Actinomycetales|Rep: Transcriptional regulator,
TetR family - Kineococcus radiotolerans SRS30216
Length = 192
Score = 35.9 bits (79), Expect = 1.3
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
++ AA+DL E G T ++AER GV + + HF +KR
Sbjct: 12 LVLAAVDLFTEQGYDATTVTEIAERAGVTKSTFFRHFPDKR 52
>UniRef50_A6Q131 Cluster: Transcriptional regulator, TetR family;
n=1; Nitratiruptor sp. SB155-2|Rep: Transcriptional
regulator, TetR family - Nitratiruptor sp. (strain
SB155-2)
Length = 201
Score = 35.9 bits (79), Expect = 1.3
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 176 GVXGLTTRKLAERLGVQQPALYWHFRNK 259
G G++ K+A+ GV +PA+Y+HF+NK
Sbjct: 19 GYSGVSLDKIAKEAGVTKPAIYYHFKNK 46
>UniRef50_A6PQ02 Cluster: Transcriptional regulator, TetR family;
n=2; Bacteria|Rep: Transcriptional regulator, TetR
family - Victivallis vadensis ATCC BAA-548
Length = 207
Score = 35.9 bits (79), Expect = 1.3
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
++R AL L + G ++ +A LG+ + ALY H++NKR
Sbjct: 8 ILRTALRLFAQYGYEAVSVSAIAGELGITKGALYRHYKNKR 48
>UniRef50_A6GC42 Cluster: Transcriptional regulator, TetR family
protein; n=1; Plesiocystis pacifica SIR-1|Rep:
Transcriptional regulator, TetR family protein -
Plesiocystis pacifica SIR-1
Length = 188
Score = 35.9 bits (79), Expect = 1.3
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+ AAL+LL E G GLT R++A R G+ + +HF+++
Sbjct: 12 IAAAALELLRERGSTGLTMRQVATRTGLSLSNVQYHFKSR 51
>UniRef50_A5GBM7 Cluster: Transcriptional regulator, TetR family;
n=2; Geobacter|Rep: Transcriptional regulator, TetR
family - Geobacter uraniumreducens Rf4
Length = 212
Score = 35.9 bits (79), Expect = 1.3
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AAL+L N G + R++ GV +P LY++F NK
Sbjct: 18 LLTAALELFNSKGYAAASVREIVAASGVTKPVLYYYFGNK 57
>UniRef50_A1WSN5 Cluster: Transcriptional regulator, TetR family;
n=1; Verminephrobacter eiseniae EF01-2|Rep:
Transcriptional regulator, TetR family -
Verminephrobacter eiseniae (strain EF01-2)
Length = 424
Score = 35.9 bits (79), Expect = 1.3
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +2
Query: 104 KVSSMTKLQPNT--VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
KV+S+ +P+ + AA+ LLNEVG G + +++ RL V + + Y H +K
Sbjct: 229 KVASIKLPEPSNHGFLAAAISLLNEVGYNGASIDRISARLSVTKGSFYHHIPSK 282
>UniRef50_A1GBH9 Cluster: Transcriptional regulator, TetR family
precursor; n=2; Salinispora|Rep: Transcriptional
regulator, TetR family precursor - Salinispora arenicola
CNS205
Length = 218
Score = 35.9 bits (79), Expect = 1.3
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHF 250
++ AA +L+ E+G ++TR LAER GV+ +++HF
Sbjct: 16 LLTAARELIGELGWNAVSTRTLAERAGVRSGLVHYHF 52
>UniRef50_A1B786 Cluster: Transcriptional regulator, TetR family;
n=1; Paracoccus denitrificans PD1222|Rep:
Transcriptional regulator, TetR family - Paracoccus
denitrificans (strain Pd 1222)
Length = 215
Score = 35.9 bits (79), Expect = 1.3
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 107 VSSMTKLQPNTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
V +L+ ++ LDL + +G +TT +A ++GV Q AL+ HF K
Sbjct: 18 VRKSAELRKAEIVATVLDLADGIGPDRVTTGAVASQIGVTQAALFRHFPTK 68
>UniRef50_A0LGB1 Cluster: Transcriptional regulator, TetR family
precursor; n=1; Syntrophobacter fumaroxidans MPOB|Rep:
Transcriptional regulator, TetR family precursor -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 228
Score = 35.9 bits (79), Expect = 1.3
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+ AA L + G G R++ E GV +P LY++F+NK
Sbjct: 36 IFLAAAQLFAQRGYNGTAVREIVELAGVTKPTLYYYFKNK 75
>UniRef50_A0H8Z9 Cluster: Transcriptional regulator, TetR family;
n=4; Comamonadaceae|Rep: Transcriptional regulator, TetR
family - Comamonas testosteroni KF-1
Length = 263
Score = 35.9 bits (79), Expect = 1.3
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
+++AA L + G T ++ + LGV +P +Y++FRNK+
Sbjct: 43 ILKAAEALFDRYGYANTTIEQIVQALGVTKPFVYYYFRNKQ 83
>UniRef50_Q8ENL7 Cluster: Transcriptional regulator; n=1;
Oceanobacillus iheyensis|Rep: Transcriptional regulator
- Oceanobacillus iheyensis
Length = 191
Score = 35.5 bits (78), Expect = 1.8
Identities = 13/41 (31%), Positives = 28/41 (68%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNKR 262
+++ A +L + G +TTR+++ + + QPALY+H+ +K+
Sbjct: 13 ILQVAEELFMKKGYRTVTTREISTKCKISQPALYYHYPDKQ 53
>UniRef50_Q89R65 Cluster: Transcriptional regulatory protein; n=1;
Bradyrhizobium japonicum|Rep: Transcriptional regulatory
protein - Bradyrhizobium japonicum
Length = 215
Score = 35.5 bits (78), Expect = 1.8
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +2
Query: 134 NTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+ +I+AAL + G ++ + LA++LGV QPA Y HF ++
Sbjct: 20 DALIKAALREAEQGGAEAISIKALAKQLGVSQPAPYRHFADR 61
>UniRef50_Q6LR00 Cluster: Hypothetical transcriptional regulator;
n=2; Photobacterium profundum|Rep: Hypothetical
transcriptional regulator - Photobacterium profundum
(Photobacterium sp. (strain SS9))
Length = 210
Score = 35.5 bits (78), Expect = 1.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ +LDL N G+ ++T +A +G+ LY+HFR K
Sbjct: 7 ILSVSLDLFNRNGISQVSTLIIATEMGISPGNLYYHFRGK 46
>UniRef50_Q6FFH1 Cluster: Putative transcription regulator protein;
n=1; Acinetobacter sp. ADP1|Rep: Putative transcription
regulator protein - Acinetobacter sp. (strain ADP1)
Length = 197
Score = 35.5 bits (78), Expect = 1.8
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +2
Query: 134 NTVIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
+T+++A + E G+ LTT K+AER G+ ++Y +F NK
Sbjct: 15 DTILQATQLCIAENGLIQLTTPKIAERSGISVGSIYQYFENK 56
>UniRef50_Q6F8T3 Cluster: Putative transcriptional regulator; n=1;
Acinetobacter sp. ADP1|Rep: Putative transcriptional
regulator - Acinetobacter sp. (strain ADP1)
Length = 201
Score = 35.5 bits (78), Expect = 1.8
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++ AA LNE LT ++ R G+++PA Y HFR+K
Sbjct: 19 ILNAAKQFLNERPFRELTVDEVMRRTGLKRPAFYVHFRDK 58
>UniRef50_Q5YWU4 Cluster: Putative transcriptional regulator; n=1;
Nocardia farcinica|Rep: Putative transcriptional
regulator - Nocardia farcinica
Length = 212
Score = 35.5 bits (78), Expect = 1.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 140 VIRAALDLLNEVGVXGLTTRKLAERLGVQQPALYWHFRNK 259
++RAA++L E G G ++ +R VQ+ ALY+H +K
Sbjct: 27 IVRAAVELFAEKGFHGTGVAEIGDRADVQRGALYYHIGSK 66
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,128,675
Number of Sequences: 1657284
Number of extensions: 13611261
Number of successful extensions: 35930
Number of sequences better than 10.0: 460
Number of HSP's better than 10.0 without gapping: 34500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35905
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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