Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_A09
(809 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A10.09c |||High-mobility group non-histone chromatin prote... 45 1e-05
SPBC23G7.09 |matmc_2|matmc|mating-type m-specific polypeptide mc... 31 0.19
SPBC1711.02 |matmc_1|matmc|mating-type m-specific polypeptide mc... 31 0.19
SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizo... 30 0.34
SPAC18G6.09c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 0.59
SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces ... 29 0.59
SPCC1235.06 |sif1||Sad1 interacting factor 1|Schizosaccharomyces... 29 0.78
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 1.0
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 28 1.4
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo... 28 1.8
SPAC23H4.02 |ppk9||serine/threonine protein kinase Ppk9 |Schizos... 27 3.2
SPBC3H7.14 |mug176||BRCT domain protein|Schizosaccharomyces pomb... 27 4.2
SPAC1805.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 4.2
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 27 4.2
SPBC32C12.02 |ste11|aff1, stex|transcription factor Ste11|Schizo... 27 4.2
SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces po... 26 5.5
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 26 7.3
SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces p... 26 7.3
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 25 9.6
SPAPJ696.01c |vps17||retromer complex subunit Vps17|Schizosaccha... 25 9.6
SPAC12G12.15 |sif3||Sad1 interacting factor 3|Schizosaccharomyce... 25 9.6
>SPAC57A10.09c |||High-mobility group non-histone chromatin
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 108
Score = 45.2 bits (102), Expect = 1e-05
Identities = 16/55 (29%), Positives = 35/55 (63%)
Frame = +1
Query: 508 VTGYILYSSEVRKAVIANNPEATFGDISRIVGNEWRSLPAATKQSWEERAARCNE 672
++ ++ +S E R+ + +NP+ATFG + ++G W+ L + ++ +EE+A + E
Sbjct: 20 MSAFMFFSIENREKMKTDNPDATFGQLGSLLGKRWKELTSTEREPYEEKARQDKE 74
>SPBC23G7.09 |matmc_2|matmc|mating-type m-specific polypeptide
mc|Schizosaccharomyces pombe|chr 2|||Manual
Length = 181
Score = 31.1 bits (67), Expect = 0.19
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 517 YILYSSEVRKAVIANNPEATFGDISRIVGNEWRS 618
+ILY E ++ +NP +S++VG WR+
Sbjct: 110 FILYRKEKHATLLKSNPSINNSQVSKLVGEMWRN 143
>SPBC1711.02 |matmc_1|matmc|mating-type m-specific polypeptide
mc|Schizosaccharomyces pombe|chr 2|||Manual
Length = 181
Score = 31.1 bits (67), Expect = 0.19
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 517 YILYSSEVRKAVIANNPEATFGDISRIVGNEWRS 618
+ILY E ++ +NP +S++VG WR+
Sbjct: 110 FILYRKEKHATLLKSNPSINNSQVSKLVGEMWRN 143
>SPBC146.09c |lsd1|swm1, saf110|histone demethylase
SWIRM1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.34
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +1
Query: 544 KAVIANNPEA--TFGDISRIVGNEWRSLPAATKQSW--EERAARCNEETAARLADEMREL 711
K + +PEA T +I +G WR+L + KQ W E A R N T RL + R++
Sbjct: 867 KQRVTGDPEARATKNEIRAKLGKTWRALDSLGKQPWVDEINARRANYST--RLEEYQRQI 924
>SPAC18G6.09c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 312
Score = 29.5 bits (63), Expect = 0.59
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +1
Query: 160 KPLGPPALASTHDVQSASTAFAQKPQHQTMHMDPTDCKPQFT---NLINTTIGSQDVEMI 330
KP G A+ ++ DV+ + + PQ P KP+ T + I + G ++ + +
Sbjct: 19 KPGG--AMVASSDVEFSLDGMSIMPQRDGNLQIPNFVKPKSTFATSNIGESNGKRNGDKV 76
Query: 331 LENSLDDSSLASPATPLSTGGNSNPYNPS 417
N S +S A +GGNSN + PS
Sbjct: 77 RGNRRSKSGHSSYAGSRISGGNSNSHLPS 105
>SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 550
Score = 29.5 bits (63), Expect = 0.59
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 587 YRASWATSGARCPPPPSRAGRSEPRAATRRPPPGSPTRCAS 709
YR+ W S R PP + ++EP +P GS + S
Sbjct: 20 YRSFWIQSSLRALPPDVKQNKTEPIPFVPKPEEGSSNKSNS 60
>SPCC1235.06 |sif1||Sad1 interacting factor 1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 257
Score = 29.1 bits (62), Expect = 0.78
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 388 GGNSNPYNPSLSVTPSQERIASQTATPVT 474
G NS+ + T S+E + S+TATPVT
Sbjct: 32 GQNSDDSQSDVRATASEEAVHSETATPVT 60
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.7 bits (61), Expect = 1.0
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 602 ATSGARCPPPPSRAGRSEPRAATRRPPPGSP 694
+TS PPP SR + A +RPPP P
Sbjct: 286 STSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Frame = +2
Query: 623 PPPPSRAGRSEP-----RAATRRPPPGSPTR 700
PPPPSR R +P + + PPP P R
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPR 344
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +1
Query: 1 YWKCRPTEXSEGXVYVCESIYDESNRVARKLKSGLRKFEHTKDVTVDEIYFFPKPLGPPA 180
Y + RP V+VCES Y++ + K+KS + E+ F +P+
Sbjct: 438 YIRGRPKGIRSTPVFVCESRYNDDTKQFSKIKSWKACMPQEVSGSEYEMILFDRPITLTK 497
Query: 181 LAS 189
+AS
Sbjct: 498 VAS 500
>SPBC13G1.08c |ash2||Ash2-trithorax family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 629 PPSRAGRSEPR---AATRRPPPGSPTRCASWRNTQQWR*RTNAPGTRATVSSRT*PT 790
P R G + P+ T PPP S ++++++ R+N P + A++ PT
Sbjct: 222 PFQRVGATVPKKRLVETETPPPSSSKLKEDYKDSKREMKRSNTPWSNASIKKNEVPT 278
>SPAC23H4.02 |ppk9||serine/threonine protein kinase Ppk9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 532
Score = 27.1 bits (57), Expect = 3.2
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Frame = +1
Query: 46 VCESIYDESNRVARKLKSGLRKFEH---TKDVTVDEIYFFPKPLGPPALASTHDVQSAST 216
VC+ IY + V+ +R+ T + V EI P + L + + S ++
Sbjct: 232 VCKGIYTIPSFVSSSASDLIRQMLMVLPTSRIKVAEIMQHPWFIAD--LPTHSRLPSRTS 289
Query: 217 AFAQKPQHQTMHMDPTDCKPQFTNLINTTIGSQDVEMILENSLDDSSLASPATPLSTGGN 396
+F+ K H+++ P D F I T S V I + + D S SP+ P+S G
Sbjct: 290 SFSSK--HRSVTFSPPDLAILFDPSI--TSPSSSVGQIPQPT--DHSALSPSKPMSISGT 343
Query: 397 SNPY-NPSLSVTPSQERIASQTA 462
+P +P+ S E + S T+
Sbjct: 344 ESPNPDPASLCYSSYEDLYSATS 366
>SPBC3H7.14 |mug176||BRCT domain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = +1
Query: 235 QHQTMHMDPTDCKPQFTNLINTTIGSQDVEMILENSLDDSSLASPATPLSTGGNSNPYNP 414
+ Q+ H P+D + + + ++ + + +ENSL + + + SNP NP
Sbjct: 23 RRQSRHSIPSD---ELNSNSSKSLNNDRISRTIENSLQKETNSDNKIKKLSKTKSNPTNP 79
Query: 415 SLSVTPSQ 438
PSQ
Sbjct: 80 KSEEDPSQ 87
>SPAC1805.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 527
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 220 FAQKPQHQTMHMDPTDCKPQFTNLINTTIGSQDVEMILENSLDDSSLA-SPATPLSTGGN 396
F + Q + + + KP+F NL++ S + + ++EN D ++A P T L + +
Sbjct: 244 FTKSGQPRLLSLQGLRLKPEFRNLLSYYC-SHNYQHLIENESADINIAHRPLTTLFSDTD 302
Query: 397 SN 402
SN
Sbjct: 303 SN 304
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 526 YSSEVRKAVIAN-NPEATFGDISRIVGNEW 612
Y++ + + +IAN N + T GDI + N W
Sbjct: 296 YANLIARTLIANPNKKMTLGDICEWIANNW 325
>SPBC32C12.02 |ste11|aff1, stex|transcription factor
Ste11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 468
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 508 VTGYILYSSEVRKAVIANNPEATFGDISRIVGNEWRSLPAATKQSWEERAA 660
+ ++LY + R+A I P + ISRI+G WR+ A K+ + + +A
Sbjct: 20 LNSFMLYRRD-RQAEI---PTSNHQSISRIIGQLWRNESAQVKKYYSDLSA 66
>SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 507
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 340 SLDDSSLASPATPLSTGGNSNPYNPSLS 423
++D SS + +TP S GGN P++ S
Sbjct: 56 NMDTSSCSCSSTPKSYGGNLAPFDEEFS 83
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 349 DSSLASPATPLSTGGNSNPYNPSLSVTPSQERIASQTATPV 471
+S+ +P+ +S + TPS+E+ SQTA+PV
Sbjct: 1243 ESATRTPSPAISESRKKPSSKDTKIETPSREQSRSQTASPV 1283
>SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1098
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 601 GNEWRSLPAATKQSWEERAARCNEETAARLAD 696
G+E + A TK+ +E ARC +E + LA+
Sbjct: 959 GDENDNAEAETKEKMDELQARCEKEQQSLLAE 990
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 25.4 bits (53), Expect = 9.6
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +3
Query: 159 KTVGSTGPGVHARRAVGVHRLRPETATSNHAHGSYGLQATVHEPNQHDDRKSGRRNDSR 335
K + PG+HA + R +P T+ S + G YG P + K+G SR
Sbjct: 10 KPTNAEFPGLHA-----MERYKPATSESLYVKGHYGPHPHKEHPAAYVAAKTGFNATSR 63
>SPAPJ696.01c |vps17||retromer complex subunit
Vps17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 549
Score = 25.4 bits (53), Expect = 9.6
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +2
Query: 635 SRAGRSEPRAATRRPPPGSPTRCASWRNTQQ 727
SR GR E PPP T +W N ++
Sbjct: 464 SRLGREEYPRRLSNPPPSQKTNQDAWTNRKR 494
>SPAC12G12.15 |sif3||Sad1 interacting factor 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 25.4 bits (53), Expect = 9.6
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 70 SNRVARKLKSGLRKFEHTKDVTVDEIYFFPKPL 168
S+ +A+ +K L +FE DVT++ F+PK L
Sbjct: 321 SHALAQSVK--LSRFELRTDVTMNSALFYPKKL 351
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.127 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,742,828
Number of Sequences: 5004
Number of extensions: 51971
Number of successful extensions: 173
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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