Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_A09
(809 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 75 5e-14
Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical pr... 75 5e-14
AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3... 38 0.011
Z99171-6|CAB16309.2| 128|Caenorhabditis elegans Hypothetical pr... 36 0.045
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 34 0.10
U51998-8|AAA96081.2| 241|Caenorhabditis elegans Hypothetical pr... 34 0.14
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 32 0.42
U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 32 0.56
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.56
U38377-1|AAA79747.2| 283|Caenorhabditis elegans Sox (mammalian ... 32 0.56
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.56
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 32 0.56
U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4 p... 31 0.74
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z69792-4|CAA93665.1| 212|Caenorhabditis elegans Hypothetical pr... 31 1.3
AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical... 30 1.7
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical... 30 1.7
AF099922-4|AAK21409.1| 497|Caenorhabditis elegans Hypothetical ... 30 1.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.7
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 2.3
U80032-3|AAM15556.1| 404|Caenorhabditis elegans Sox (mammalian ... 30 2.3
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 29 3.0
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 29 3.0
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 29 3.0
Z80219-7|CAN86594.1| 804|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z80219-5|CAB02302.2| 784|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z75546-12|CAN86896.1| 804|Caenorhabditis elegans Hypothetical p... 29 3.9
Z75546-10|CAA99896.2| 784|Caenorhabditis elegans Hypothetical p... 29 3.9
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 29 3.9
AL032632-14|CAO82067.1| 504|Caenorhabditis elegans Hypothetical... 29 3.9
AL032632-13|CAA21587.2| 507|Caenorhabditis elegans Hypothetical... 29 3.9
AC024796-10|AAK29896.1| 623|Caenorhabditis elegans Hypothetical... 29 3.9
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z68009-2|CAA92004.2| 891|Caenorhabditis elegans Hypothetical pr... 29 5.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 5.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 5.2
Z92831-2|CAB07368.2| 861|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical pr... 28 6.9
U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical p... 28 6.9
U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical p... 28 6.9
AJ131742-1|CAA10498.1| 590|Caenorhabditis elegans protein ( Cae... 28 6.9
AF098989-4|AAK18956.2| 590|Caenorhabditis elegans Dystrobrevin ... 28 6.9
Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 9.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 9.1
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 28 9.1
AF016676-8|AAG24105.1| 502|Caenorhabditis elegans Hypothetical ... 28 9.1
AC026301-5|AAK68894.1| 745|Caenorhabditis elegans Hypothetical ... 28 9.1
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 28 9.1
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical protein
C26C6.1a protein.
Length = 1883
Score = 75.4 bits (177), Expect = 5e-14
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Frame = +1
Query: 511 TGYILYSSEVRKAVIANNPEATFGDISRIVGNEWRSLPAATKQSWEERAARCNEETAARL 690
+GYIL+S+EVRK ++ NP+A FG++S+IVG EW+ L K+ +E RA E A +
Sbjct: 1454 SGYILFSAEVRKRIMHENPDAGFGEVSKIVGIEWKKLSEEQKKHYEMRAEVVAVEKAKQD 1513
Query: 691 ADEMRELAQHTTMEM-TYECXWDTCDCQFEDLTDCMEHCI 807
A + + ++ Y+C W CD Q++ + +EH I
Sbjct: 1514 AIKASQAMTLLPGQVRIYQCKWAACDSQYDTESALLEHVI 1553
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 75.4 bits (177), Expect = 5e-14
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Frame = +1
Query: 511 TGYILYSSEVRKAVIANNPEATFGDISRIVGNEWRSLPAATKQSWEERAARCNEETAARL 690
+GYIL+S+EVRK ++ NP+A FG++S+IVG EW+ L K+ +E RA E A +
Sbjct: 1454 SGYILFSAEVRKRIMHENPDAGFGEVSKIVGIEWKKLSEEQKKHYEMRAEVVAVEKAKQD 1513
Query: 691 ADEMRELAQHTTMEM-TYECXWDTCDCQFEDLTDCMEHCI 807
A + + ++ Y+C W CD Q++ + +EH I
Sbjct: 1514 AIKASQAMTLLPGQVRIYQCKWAACDSQYDTESALLEHVI 1553
>Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical
protein C26C6.1b protein.
Length = 513
Score = 75.4 bits (177), Expect = 5e-14
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Frame = +1
Query: 511 TGYILYSSEVRKAVIANNPEATFGDISRIVGNEWRSLPAATKQSWEERAARCNEETAARL 690
+GYIL+S+EVRK ++ NP+A FG++S+IVG EW+ L K+ +E RA E A +
Sbjct: 84 SGYILFSAEVRKRIMHENPDAGFGEVSKIVGIEWKKLSEEQKKHYEMRAEVVAVEKAKQD 143
Query: 691 ADEMRELAQHTTMEM-TYECXWDTCDCQFEDLTDCMEHCI 807
A + + ++ Y+C W CD Q++ + +EH I
Sbjct: 144 AIKASQAMTLLPGQVRIYQCKWAACDSQYDTESALLEHVI 183
>AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3
protein.
Length = 689
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/66 (30%), Positives = 37/66 (56%)
Frame = +1
Query: 511 TGYILYSSEVRKAVIANNPEATFGDISRIVGNEWRSLPAATKQSWEERAARCNEETAARL 690
T YI++ + R ++ + T GD+++ G +W+S+ A K+ W ++AA + AR
Sbjct: 566 TAYIIWFNANRNSMKEDGD--TLGDVAKKAGAKWKSMSADDKKEWNDKAA----QDKARY 619
Query: 691 ADEMRE 708
EM+E
Sbjct: 620 EAEMKE 625
>Z99171-6|CAB16309.2| 128|Caenorhabditis elegans Hypothetical
protein F47G4.6 protein.
Length = 128
Score = 35.5 bits (78), Expect = 0.045
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 511 TGYILYSSEVRKAVIANNPEATFGDISRIVGNEWRSLPAATKQSWEERAARCNEETAARL 690
+ Y L+ E + P ATFG IS+ + +W SL K+++++R + + + A
Sbjct: 54 SAYALFFRERQSLEKRAAPYATFGQISQKIARQWDSLTEEEKKAYKQRCEKNRKTSIANA 113
Query: 691 ADE 699
+E
Sbjct: 114 VEE 116
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 34.3 bits (75), Expect = 0.10
Identities = 26/68 (38%), Positives = 34/68 (50%)
Frame = +2
Query: 590 RASWATSGARCPPPPSRAGRSEPRAATRRPPPGSPTRCASWRNTQQWR*RTNAPGTRATV 769
R + T A P P+ S PRA T R P G P+R + RN RT P +RATV
Sbjct: 244 RPATTTGTATRPTRPAVPAASAPRALTSRAPAG-PSRPTTTRNAAP-APRTAVP-SRATV 300
Query: 770 SSRT*PTA 793
++T P +
Sbjct: 301 LTKTAPAS 308
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 34.3 bits (75), Expect = 0.10
Identities = 26/68 (38%), Positives = 34/68 (50%)
Frame = +2
Query: 590 RASWATSGARCPPPPSRAGRSEPRAATRRPPPGSPTRCASWRNTQQWR*RTNAPGTRATV 769
R + T A P P+ S PRA T R P G P+R + RN RT P +RATV
Sbjct: 244 RPATTTGTATRPTRPAVPAASAPRALTSRAPAG-PSRPTTTRNAAP-APRTAVP-SRATV 300
Query: 770 SSRT*PTA 793
++T P +
Sbjct: 301 LTKTAPAS 308
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 34.3 bits (75), Expect = 0.10
Identities = 26/68 (38%), Positives = 34/68 (50%)
Frame = +2
Query: 590 RASWATSGARCPPPPSRAGRSEPRAATRRPPPGSPTRCASWRNTQQWR*RTNAPGTRATV 769
R + T A P P+ S PRA T R P G P+R + RN RT P +RATV
Sbjct: 244 RPATTTGTATRPTRPAVPAASAPRALTSRAPAG-PSRPTTTRNAAP-APRTAVP-SRATV 300
Query: 770 SSRT*PTA 793
++T P +
Sbjct: 301 LTKTAPAS 308
>U51998-8|AAA96081.2| 241|Caenorhabditis elegans Hypothetical
protein C12D12.5 protein.
Length = 241
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 523 LYSSEVRKAVIANNPEATFGDISRIVGNEWRSLPAATKQSWEERAARCNEE 675
++S + R+ + A + DIS+++G EWR + K + ERA + EE
Sbjct: 111 VWSQQRRQQIAATGQKFHNSDISKMLGAEWRKMEEHEKVPFVERAKQLREE 161
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 32.3 bits (70), Expect = 0.42
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Frame = +1
Query: 157 PKPLGPPALASTHDVQSASTAFAQKPQHQTMHMDPTDCKPQFTNLINTTIGSQDVEMILE 336
P P P + S+ S+ST T + PT Q T + +
Sbjct: 458 PTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGV-PTSTSNQPTPSTSNPTTPKSTVTASP 516
Query: 337 NSLDDSSLASPATPLSTGGNSNPYNPSLSVT---PSQERIASQTAT-PVT 474
++ +S ASP+T S+ S ++PS ++T P AS T T P+T
Sbjct: 517 STTGATSTASPSTITSSAPTSQSHSPSSTMTSTVPVTSTFASTTTTVPIT 566
>U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical
protein F26A1.11 protein.
Length = 239
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +2
Query: 623 PPPPSRAGRSEPRAATRRPPPGSPTRCASWRNTQQ 727
PP PSR R P R PPP P A W Q+
Sbjct: 39 PPSPSRPQRPPPSRPQRPPPPRQPRCEAGWTLVQR 73
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 590 RASWATSGARCPPPPSRAGRSEPRAATRRPPPGSP 694
R + A G R P P R G P RPPPG+P
Sbjct: 768 RPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 590 RASWATSGARCPPPPSRAGRSEPRAATRRPPPGSP 694
R + A G R P P R G P RPPPG+P
Sbjct: 768 RPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>U38377-1|AAA79747.2| 283|Caenorhabditis elegans Sox (mammalian sry
box) familyprotein 2, isoform a protein.
Length = 283
Score = 31.9 bits (69), Expect = 0.56
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 508 VTGYILYSSEVRKAVIANNPEATFGDISRIVGNEWRSLPAATKQSWEERAAR 663
+ ++++S RK + NP+ +IS+ +G EW+ L K+ + + A R
Sbjct: 64 MNAFMVWSRGQRKKMALENPKMHNSEISKRLGTEWKMLSEQEKRPFIDEAKR 115
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 590 RASWATSGARCPPPPSRAGRSEPRAATRRPPPGSP 694
R + A G R P P R G P RPPPG+P
Sbjct: 768 RPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 590 RASWATSGARCPPPPSRAGRSEPRAATRRPPPGSP 694
R + A G R P P R G P RPPPG+P
Sbjct: 768 RPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4
protein.
Length = 697
Score = 31.5 bits (68), Expect = 0.74
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 583 DISRIVGNEWRSLPAATKQSWEERAARCNEETAARLADEMRE 708
D+++ G +W+++ + K+ WEE+A EE +R EM+E
Sbjct: 583 DVAKKGGAKWKTMSSDDKKKWEEKA----EEDKSRYEKEMKE 620
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.1 bits (67), Expect = 0.98
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +2
Query: 623 PPPPSRAGRSEPRAATRRP--PPGSPTR 700
P PP+R P TRRP PPG PTR
Sbjct: 250 PGPPTRRPPGPPGPPTRRPPGPPGPPTR 277
>Z69792-4|CAA93665.1| 212|Caenorhabditis elegans Hypothetical
protein F40E10.2 protein.
Length = 212
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +1
Query: 508 VTGYILYSSEVRKAVIANNPEATFGDISRIVGNEWRSLPAATKQSWEERAAR 663
+ ++++S R+ + +NP+ +IS+ +G EW+ L K+ + + A R
Sbjct: 52 MNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKQLSEQEKRPFIDEAKR 103
>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
protein Y105E8A.26b protein.
Length = 1133
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 337 NSLDDSSLASPATPLSTGGNSNPYNPSLSVTPSQERIASQTATP 468
N +S ++ +T ++T +SNP P L TP+++ AS+T TP
Sbjct: 790 NRQSSNSQSTLSTFVTTASSSNPPRPLL--TPTRDESASRTTTP 831
>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
protein Y105E8A.26a protein.
Length = 1172
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 337 NSLDDSSLASPATPLSTGGNSNPYNPSLSVTPSQERIASQTATP 468
N +S ++ +T ++T +SNP P L TP+++ AS+T TP
Sbjct: 790 NRQSSNSQSTLSTFVTTASSSNPPRPLL--TPTRDESASRTTTP 831
>AF099922-4|AAK21409.1| 497|Caenorhabditis elegans Hypothetical
protein F56F11.3 protein.
Length = 497
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Frame = +1
Query: 649 ERAARCNEETAARLADEMRELAQHT---TMEMTYECXWDTCDCQFEDLTDCMEH 801
+R C ++ + L H T E YEC WD CD +F + H
Sbjct: 411 KRLHHCTHPNCGKVYTKSSHLKAHFRTHTGEKPYECSWDGCDWRFARSDELTRH 464
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = +2
Query: 548 RS*PTTRRLHSATYRASWATSGARCPPPPSRAGRSEPRAA--TRRPPPGSP 694
R P T L S +G PPPP R R P + T PP GSP
Sbjct: 304 RGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 354
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +2
Query: 608 SGARCPPPPSRAGR-SEPRAATRRPPP-GSP 694
+G+ PPPP AG PR + PPP GSP
Sbjct: 250 AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP 280
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 611 GARCPPPPSRAGRSEPRAATRRPPPGSP 694
G R S R EPR R PP GSP
Sbjct: 389 GPRKSSEESSESREEPRGPRRSPPTGSP 416
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = +2
Query: 548 RS*PTTRRLHSATYRASWATSGARCPPPPSRAGRSEPRAA--TRRPPPGSP 694
R P T L S +G PPPP R R P + T PP GSP
Sbjct: 325 RGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 375
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +2
Query: 608 SGARCPPPPSRAGR-SEPRAATRRPPP-GSP 694
+G+ PPPP AG PR + PPP GSP
Sbjct: 271 AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP 301
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 611 GARCPPPPSRAGRSEPRAATRRPPPGSP 694
G R S R EPR R PP GSP
Sbjct: 410 GPRKSSEESSESREEPRGPRRSPPTGSP 437
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = +2
Query: 548 RS*PTTRRLHSATYRASWATSGARCPPPPSRAGRSEPRAA--TRRPPPGSP 694
R P T L S +G PPPP R R P + T PP GSP
Sbjct: 310 RGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 360
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +2
Query: 608 SGARCPPPPSRAGR-SEPRAATRRPPP-GSP 694
+G+ PPPP AG PR + PPP GSP
Sbjct: 256 AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP 286
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 611 GARCPPPPSRAGRSEPRAATRRPPPGSP 694
G R S R EPR R PP GSP
Sbjct: 395 GPRKSSEESSESREEPRGPRRSPPTGSP 422
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +1
Query: 295 NTTIGSQDVEMILENSLDDSSLASPATPLSTGGNSNPYNPSLSVTPSQERIASQTATPV 471
+T+ GS E S SS+AS + ST N NP S S +Q SQ+ +PV
Sbjct: 821 STSSGSTVTVGSTEASTSGSSVASSSPAPSTSQNPNPSTSSGSSMITQSPYPSQSTSPV 879
>U80032-3|AAM15556.1| 404|Caenorhabditis elegans Sox (mammalian sry
box) familyprotein 1 protein.
Length = 404
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +1
Query: 508 VTGYILYSSEVRKAVIANNPEATFGDISRIVGNEWRSLPAATKQSWEERAAR 663
+ ++++S R+ + + P+ +IS+ +G+ WRSL K + A R
Sbjct: 97 MNAFMVWSQMERRKICEHQPDMHNAEISKQLGSRWRSLTDEEKAPFVAEAER 148
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical protein
T11B7.4d protein.
Length = 1424
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 477 EEEEGTEAKDRHRLHTVLQRGAEGGHSQQ 563
EEEE +DR R+ V ++G EGG +++
Sbjct: 943 EEEEVDVVQDRERIRVVGRKGGEGGEAEK 971
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 477 EEEEGTEAKDRHRLHTVLQRGAEGGHSQQ 563
EEEE +DR R+ V ++G EGG +++
Sbjct: 943 EEEEVDVVQDRERIRVVGRKGGEGGEAEK 971
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 29.5 bits (63), Expect = 3.0
Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Frame = +2
Query: 557 PTTRRLHSATYRASWATSGARCPPPPS--RAG---RSEPRAATRRPPPGSPTRCASWRNT 721
PTT RL +A AT+ P P+ RA + P A TR P P SP S R
Sbjct: 288 PTTPRLTTARATTPLATTSRPTTPSPTTPRATTPLATTPLATTRAPLPPSPPPRTSKRPV 347
Query: 722 QQWR*RTNAPGTRATVSSRT*PT 790
Q A TR ++ PT
Sbjct: 348 TQAPTTPRATTTRRPTTTTPRPT 370
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = +2
Query: 557 PTTRRLHSATYRASWATSGARCPPPPSRAGRSEPRAATRRP--PPGSPTRCASWRNTQQW 730
PTT R + T A+ + R P PPS R+ R T+ P P + TR + +
Sbjct: 313 PTTPR--ATTPLATTPLATTRAPLPPSPPPRTSKRPVTQAPTTPRATTTRRPTTTTPRPT 370
Query: 731 R*RTNAPGTRATVSSRT 781
RT P T + T
Sbjct: 371 PRRTRRPKTTTAAPTTT 387
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 602 ATSGARCPPP-PSRAGRSEPRAATRRPPPGSP 694
A +GA PPP P+ A EP A PP +P
Sbjct: 363 AAAGAAAPPPAPAAAAAPEPAPAPAAAPPPAP 394
>Z80219-7|CAN86594.1| 804|Caenorhabditis elegans Hypothetical
protein T01H8.1e protein.
Length = 804
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 166 LGPPALASTHDVQSASTAFAQKPQHQ---TMHMDPTDCKPQFTNLINTTI 306
LG P + +++ S Q H+ +M DPTDC TN +++I
Sbjct: 6 LGEPFGITPSSIENVSPGIDQCKDHRMDVSMRSDPTDCSSDTTNTFHSSI 55
>Z80219-5|CAB02302.2| 784|Caenorhabditis elegans Hypothetical
protein T01H8.1a protein.
Length = 784
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 166 LGPPALASTHDVQSASTAFAQKPQHQ---TMHMDPTDCKPQFTNLINTTI 306
LG P + +++ S Q H+ +M DPTDC TN +++I
Sbjct: 12 LGEPFGITPSSIENVSPGIDQCKDHRMDVSMRSDPTDCSSDTTNTFHSSI 61
>Z75546-12|CAN86896.1| 804|Caenorhabditis elegans Hypothetical
protein T01H8.1e protein.
Length = 804
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 166 LGPPALASTHDVQSASTAFAQKPQHQ---TMHMDPTDCKPQFTNLINTTI 306
LG P + +++ S Q H+ +M DPTDC TN +++I
Sbjct: 6 LGEPFGITPSSIENVSPGIDQCKDHRMDVSMRSDPTDCSSDTTNTFHSSI 55
>Z75546-10|CAA99896.2| 784|Caenorhabditis elegans Hypothetical
protein T01H8.1a protein.
Length = 784
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 166 LGPPALASTHDVQSASTAFAQKPQHQ---TMHMDPTDCKPQFTNLINTTI 306
LG P + +++ S Q H+ +M DPTDC TN +++I
Sbjct: 12 LGEPFGITPSSIENVSPGIDQCKDHRMDVSMRSDPTDCSSDTTNTFHSSI 61
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 29.1 bits (62), Expect = 3.9
Identities = 35/159 (22%), Positives = 60/159 (37%), Gaps = 18/159 (11%)
Frame = +1
Query: 52 ESIYDESNRVARKLKSGLRKFEHTKDVTVDEIYFFPKPLGPPALASTHDVQSASTAFAQK 231
E +S+ V + K G K +++ DE K P T +++T +K
Sbjct: 436 EETTTKSHVVPKPTKKGTVKVTPKLELSFDEPTEITKAPHPVKPRKTTTTTTSTTTTTEK 495
Query: 232 P---QHQTMHMDPTDCKPQFTNLI-------NTTIGSQDVEMILEN----SLDDSSLASP 369
P + T + PT + + T + TT G E + + ++SS
Sbjct: 496 PVITEGSTTNKQPTTSEHESTTEVPTTTEEPTTTTGQHKTEKAITTEEPTTTEESSTTEE 555
Query: 370 AT----PLSTGGNSNPYNPSLSVTPSQERIASQTATPVT 474
T P +TG NP+ + P+ ++ TA P T
Sbjct: 556 VTTTEEPANTGNPPTTENPTTTEQPTSTAESTTTALPFT 594
>AL032632-14|CAO82067.1| 504|Caenorhabditis elegans Hypothetical
protein Y11D7A.12b protein.
Length = 504
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/83 (27%), Positives = 36/83 (43%)
Frame = +1
Query: 337 NSLDDSSLASPATPLSTGGNSNPYNPSLSVTPSQERIASQTATPVTGXXXXXXXXXIVTG 516
+SL+ SLA S G + PS SVT I SQ +T + I
Sbjct: 20 SSLNAPSLADAPEVRSDDGEAETSEPSTSVTAVPMEIVSQAST--SAPVNQLLASGIDMS 77
Query: 517 YILYSSEVRKAVIANNPEATFGD 585
++ ++ V +A++A+ FGD
Sbjct: 78 SVIKNNAVLQALLASASAGGFGD 100
>AL032632-13|CAA21587.2| 507|Caenorhabditis elegans Hypothetical
protein Y11D7A.12a protein.
Length = 507
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/83 (27%), Positives = 36/83 (43%)
Frame = +1
Query: 337 NSLDDSSLASPATPLSTGGNSNPYNPSLSVTPSQERIASQTATPVTGXXXXXXXXXIVTG 516
+SL+ SLA S G + PS SVT I SQ +T + I
Sbjct: 20 SSLNAPSLADAPEVRSDDGEAETSEPSTSVTAVPMEIVSQAST--SAPVNQLLASGIDMS 77
Query: 517 YILYSSEVRKAVIANNPEATFGD 585
++ ++ V +A++A+ FGD
Sbjct: 78 SVIKNNAVLQALLASASAGGFGD 100
>AC024796-10|AAK29896.1| 623|Caenorhabditis elegans Hypothetical
protein Y48G1C.7 protein.
Length = 623
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +3
Query: 144 DILLPKTVGSTGPGVHARRAVGVHRLRPETATSNHAHGSYGLQATVHEPNQHDD 305
+I+ + +G+ G V+ V H P+ T Q V EPN HDD
Sbjct: 533 EIVEEEVIGTVGDDVNLEEEV--HENEPKVYTGEKQINDVLEQVVVEEPNHHDD 584
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 28.7 bits (61), Expect = 5.2
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +2
Query: 548 RS*PTTRRLHSATYRASWATSGA--RCPPPPSRAGRSEPRAATRRPPPGSPTRCASWRNT 721
+S P RR S + S A A R PP+ A R +A++ PPP +P R S +
Sbjct: 312 KSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPP-APKRAKSRSKS 370
Query: 722 QQWR*RTNAPGTRATVSSR 778
R R + +++ + R
Sbjct: 371 PPARRRRSPSASKSPPAPR 389
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 527 TPARCGRRS*PTTRRLHSATYRASWATSGARCPPPPSRAGRSE 655
+PA RR RR R+ ++S +R PPPP R R +
Sbjct: 483 SPAAAPRRRQSPQRRRSPRRRRSPSSSSRSRSPPPPPRRPRQD 525
>Z68009-2|CAA92004.2| 891|Caenorhabditis elegans Hypothetical
protein R09A8.2 protein.
Length = 891
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 85 RKLKSGLRKFEHTKDVTVDEIYFFPKPLGPPALASTHDVQ 204
+KL S L+ + +D T D+ ++F + P THD Q
Sbjct: 241 KKLASALQDYRTLRDATPDKTFYFGEIPTSPINVGTHDDQ 280
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +2
Query: 527 TPARCGRRS*PTTRRLHSATYRASWATSGARCPPPPSRAGRSEPRAATRRPPP 685
TP R + S P++ + S +S++T A PPPP+R S A R PPP
Sbjct: 530 TPVRQYKPSFPSSAPIGSGA--SSYSTPAA--PPPPTRV-ESHGLAPARPPPP 577
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +2
Query: 527 TPARCGRRS*PTTRRLHSATYRASWATSGARCPPPPSRAGRSEPRAATRRPPP 685
TP R + S P++ + S +S++T A PPPP+R S A R PPP
Sbjct: 356 TPVRQYKPSFPSSAPIGSGA--SSYSTPAA--PPPPTRV-ESHGLAPARPPPP 403
>Z92831-2|CAB07368.2| 861|Caenorhabditis elegans Hypothetical
protein F22G12.4 protein.
Length = 861
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 525 VLQRGAEGGHSQQPGGYIRRHIAHRGQRVALA 620
+L GA+G SQ PG Y H+A R ALA
Sbjct: 66 LLGNGADGRDSQSPGDYNVVHVASRIPSPALA 97
>Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical
protein T24D1.3 protein.
Length = 349
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 532 SEVRKAVIANNPEATFGDISRIVGNEWRSLPAA 630
S +R+ AN + FGDISR + N +PAA
Sbjct: 91 SVLRRRRYANPEQERFGDISRRIHNPANQIPAA 123
>U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical
protein C17G10.6b protein.
Length = 487
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 623 PPPPSRAGRSEPRAATRRPP-PGSPTR 700
PPPP GR RRPP P +P R
Sbjct: 97 PPPPRHRGRRPTGGRGRRPPTPQAPVR 123
>U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical
protein C17G10.6a protein.
Length = 683
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 623 PPPPSRAGRSEPRAATRRPP-PGSPTR 700
PPPP GR RRPP P +P R
Sbjct: 148 PPPPRHRGRRPTGGRGRRPPTPQAPVR 174
>AJ131742-1|CAA10498.1| 590|Caenorhabditis elegans protein (
Caenorhabditis elegansmRNA for dystrobrevin. ).
Length = 590
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 557 PTT-RRLHSATYRASWATSGARCPPPPSRAG 646
PTT RR H+AT A W TS P S G
Sbjct: 371 PTTIRRQHAATSSADWPTSPVLLPGQASHGG 401
>AF098989-4|AAK18956.2| 590|Caenorhabditis elegans Dystrobrevin
homolog protein 1 protein.
Length = 590
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 557 PTT-RRLHSATYRASWATSGARCPPPPSRAG 646
PTT RR H+AT A W TS P S G
Sbjct: 371 PTTIRRQHAATSSADWPTSPVLLPGQASHGG 401
>Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical
protein F49B2.3 protein.
Length = 322
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/66 (31%), Positives = 25/66 (37%)
Frame = +2
Query: 581 ATYRASWATSGARCPPPPSRAGRSEPRAATRRPPPGSPTRCASWRNTQQWR*RTNAPGTR 760
AT R S SG R PPP R+G R A G C S + W G +
Sbjct: 142 ATSRTSTRDSGNRPPPPRERSGTQPVRQAAGY-DQGHELSCVSGSLQRLWPTAAAPVGGQ 200
Query: 761 ATVSSR 778
+ SR
Sbjct: 201 PSTPSR 206
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 605 TSGARCPPPPSRAGRSE-PRAATRRPPPGSPTR 700
+SG PPPP GR+ P PPP P+R
Sbjct: 292 SSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 324
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 605 TSGARCPPPPSRAGRSE-PRAATRRPPPGSPTR 700
+SG PPPP GR+ P PPP P+R
Sbjct: 302 SSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 334
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +3
Query: 147 ILLPKTVGSTGPGVHARRAVGVHRLRPETATSNHAHGSYGLQATVHEPNQHDDRKS 314
ILLP T+ + +HA+R H H S+G H PN DD KS
Sbjct: 11 ILLPLTIQHSSKDIHAQRNSNYH-------GKGHLPDSFGYH---HSPNAPDDSKS 56
>AF016676-8|AAG24105.1| 502|Caenorhabditis elegans Hypothetical
protein F41B5.9 protein.
Length = 502
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 271 KPQFTNLINTTIGSQDVEMILENSLDDSSLASPATPLSTGGNSNPYNPSLS 423
+P F L N +D + N +D + L AT + G+ PYNP ++
Sbjct: 137 RPSFLTLCNPM--DEDSPGPIRNIIDCNYLLDRATEILKNGSWQPYNPEMT 185
>AC026301-5|AAK68894.1| 745|Caenorhabditis elegans Hypothetical
protein Y54F10BM.3 protein.
Length = 745
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 607 EWRSLPAATKQSWEERAARCNEETAAR 687
+WR A +++WE R AR +E +A++
Sbjct: 215 QWRDEKMAREKAWERRLARVSEVSASK 241
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 27.9 bits (59), Expect = 9.1
Identities = 28/86 (32%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Frame = +2
Query: 530 PARCGRRS*PTTRRLHSATYRA-SWATSGARCPPPPSRAGRSE-PRAATRRPPPGSPTRC 703
P R S P RR S R+ S R P PP R S P +R PP +R
Sbjct: 83 PIRAPSASPPRRRRDDSPRKRSRSPPRRTRRSPSPPRRRRISRSPVRRSRSPPRRQVSRS 142
Query: 704 ASWRNTQQWR*RTNAPGTRATVSSRT 781
S +Q R R+ P R SR+
Sbjct: 143 RSPPPRRQQRSRSPPPAKRRRDQSRS 168
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.127 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,067,397
Number of Sequences: 27780
Number of extensions: 337820
Number of successful extensions: 1482
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1437
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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