Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_A08
(852 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas... 261 1e-70
SPCC31H12.05c |sds21||serine/threonine protein phosphatase Sds21... 239 5e-64
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 202 4e-53
SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc... 138 9e-34
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa... 138 9e-34
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 131 1e-31
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas... 127 2e-30
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc... 126 3e-30
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ... 126 4e-30
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 105 6e-24
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 29 0.84
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 29 1.1
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 28 1.9
SPAC19A8.08 |upf2||nonsense-mediated decay protein Upf2|Schizosa... 27 2.6
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 27 2.6
SPAC3A11.02 |cps3|mug188|zinc finger protein Cps3|Schizosaccharo... 27 3.4
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 27 4.5
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 26 7.8
SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|ch... 26 7.8
>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
PP1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 261 bits (639), Expect = 1e-70
Identities = 117/141 (82%), Positives = 131/141 (92%)
Frame = +3
Query: 153 ELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFSSQPILLELEAPLKICGDI 332
++++D++I +LL+VRG +PG VQL+E EI+ LC K+REIF SQPILLELEAPLKICGDI
Sbjct: 5 DVDLDSIIDRLLEVRGSRPGRQVQLSEDEIRFLCNKAREIFISQPILLELEAPLKICGDI 64
Query: 333 HGQYYDLLRLSEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 512
HGQYYDLLRL EYGGFPPE+NYLFLGDYVDRGKQSLE ICLLLAYKIKYPENFF+LRGNH
Sbjct: 65 HGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLEVICLLLAYKIKYPENFFILRGNH 124
Query: 513 ECASINRIYGFYDECKRRYNI 575
ECASINRIYGFYDECKRRYNI
Sbjct: 125 ECASINRIYGFYDECKRRYNI 145
Score = 118 bits (283), Expect = 1e-27
Identities = 57/93 (61%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Frame = +1
Query: 490 SFFYAETTSVPASIG-FMGFTMSAKGGITFKLWKTFTDCFNCLPVAAIVDEKIFCCHGGL 666
+FF ASI GF K KLWKTFTDCFNCLP+AAI+DEKIF HGGL
Sbjct: 116 NFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFTMHGGL 175
Query: 667 SPDLQAMGQIXXIMRXTDVPDQGLLCXXLWSXP 765
SPDL +M QI IMR TDVPD GLLC LWS P
Sbjct: 176 SPDLNSMDQIQRIMRPTDVPDTGLLCDLLWSDP 208
>SPCC31H12.05c |sds21||serine/threonine protein phosphatase
Sds21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 322
Score = 239 bits (584), Expect = 5e-64
Identities = 109/141 (77%), Positives = 122/141 (86%)
Frame = +3
Query: 153 ELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFSSQPILLELEAPLKICGDI 332
+ +ID +I+KL+K R KP VQL++ EI+ LC SR IF SQP+LLELEAPLKICGDI
Sbjct: 2 DYDIDAIIEKLVKARNGKPSKQVQLSDAEIRYLCTTSRSIFLSQPMLLELEAPLKICGDI 61
Query: 333 HGQYYDLLRLSEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 512
HGQY DLLRL EYGG+PP++NYLFLGDYVDRGKQSLE ICLL AYKIKYPENFFLLRGNH
Sbjct: 62 HGQYSDLLRLFEYGGYPPDANYLFLGDYVDRGKQSLEVICLLFAYKIKYPENFFLLRGNH 121
Query: 513 ECASINRIYGFYDECKRRYNI 575
E ASINRIYGFYDECKRRY+I
Sbjct: 122 EFASINRIYGFYDECKRRYSI 142
Score = 116 bits (280), Expect = 3e-27
Identities = 53/93 (56%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Frame = +1
Query: 490 SFFYAETTSVPASIG-FMGFTMSAKGGITFKLWKTFTDCFNCLPVAAIVDEKIFCCHGGL 666
+FF ASI GF K + KLWKTFTDCFNC+PVAA++DEKIFC HGGL
Sbjct: 113 NFFLLRGNHEFASINRIYGFYDECKRRYSIKLWKTFTDCFNCMPVAAVIDEKIFCMHGGL 172
Query: 667 SPDLQAMGQIXXIMRXTDVPDQGLLCXXLWSXP 765
SPDL ++ QI I+R TD+PD GLLC +WS P
Sbjct: 173 SPDLNSLDQIQRIIRPTDIPDTGLLCDLVWSDP 205
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 202 bits (494), Expect = 4e-53
Identities = 95/141 (67%), Positives = 109/141 (77%), Gaps = 1/141 (0%)
Frame = +3
Query: 156 LNIDNVIKKLLKVR-GEKPGMNVQLTEIEIKGLCLKSREIFSSQPILLELEAPLKICGDI 332
LN+D +I++L+ V K +V L EI +C+ REIF SQP LLEL P+KI GD+
Sbjct: 190 LNVDEMIQRLIHVGYSRKSSKSVCLKNAEITSICMAVREIFLSQPTLLELTPPVKIVGDV 249
Query: 333 HGQYYDLLRLSEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 512
HGQY DL+RL E GFPP SNYLFLGDYVDRGKQSLETI LL YKI+YPENFFLLRGNH
Sbjct: 250 HGQYSDLIRLFEMCGFPPSSNYLFLGDYVDRGKQSLETILLLFLYKIRYPENFFLLRGNH 309
Query: 513 ECASINRIYGFYDECKRRYNI 575
ECA+I R+YGFYDECKRR NI
Sbjct: 310 ECANITRVYGFYDECKRRCNI 330
Score = 91.1 bits (216), Expect = 2e-19
Identities = 42/75 (56%), Positives = 47/75 (62%)
Frame = +1
Query: 541 GFTMSAKGGITFKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMGQIXXIMRXTD 720
GF K K+WKTF + FNCLP+A++V KIFC HGGLSP L M I I R TD
Sbjct: 319 GFYDECKRRCNIKIWKTFINTFNCLPIASVVAGKIFCVHGGLSPSLSHMDDIREIPRPTD 378
Query: 721 VPDQGLLCXXLWSXP 765
VPD GLL LWS P
Sbjct: 379 VPDYGLLNDLLWSDP 393
>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 138 bits (334), Expect = 9e-34
Identities = 57/115 (49%), Positives = 83/115 (72%)
Frame = +3
Query: 225 LTEIEIKGLCLKSREIFSSQPILLELEAPLKICGDIHGQYYDLLRLSEYGGFPPESNYLF 404
L+E +++ LC K+RE+ + + + P+ +CGDIHGQ++DL+ L + GG P+ NYLF
Sbjct: 36 LSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHDLMELFKIGGDVPDMNYLF 95
Query: 405 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY 569
+GDYVDRG S+ET+ LL+A K++YP +LRGNHE I ++YGFYDEC R+Y
Sbjct: 96 MGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQITQVYGFYDECLRKY 150
Score = 70.5 bits (165), Expect = 3e-13
Identities = 25/62 (40%), Positives = 42/62 (67%)
Frame = +1
Query: 580 LWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMGQIXXIMRXTDVPDQGLLCXXLWS 759
+WK FT+ F+ P+ A+++++IFC HGGLSP + ++ + + R +VP +G +C LWS
Sbjct: 155 VWKHFTNLFDYFPLTALIEDRIFCLHGGLSPSIDSLDHVRTLDRVQEVPHEGPMCDLLWS 214
Query: 760 XP 765
P
Sbjct: 215 DP 216
>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 138 bits (334), Expect = 9e-34
Identities = 56/115 (48%), Positives = 84/115 (73%)
Frame = +3
Query: 225 LTEIEIKGLCLKSREIFSSQPILLELEAPLKICGDIHGQYYDLLRLSEYGGFPPESNYLF 404
L+E ++ +C ++E+ S + + + P+ +CGDIHGQ++DL+ L GG P++NYLF
Sbjct: 23 LSEEDVIQMCDLAKEVLSVESNVQSVRCPVTVCGDIHGQFHDLMELFNIGGPSPDTNYLF 82
Query: 405 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY 569
+GDYVDRG S+ET+ LL+A+KI+YP+ +LRGNHE I ++YGFYDEC R+Y
Sbjct: 83 MGDYVDRGYHSVETVSLLIAFKIRYPQRITILRGNHESRQITQVYGFYDECLRKY 137
Score = 72.1 bits (169), Expect = 9e-14
Identities = 26/62 (41%), Positives = 42/62 (67%)
Frame = +1
Query: 580 LWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMGQIXXIMRXTDVPDQGLLCXXLWS 759
+W+ FTD F+ LP+ A+++++IFC HGGLSP + + + + R +VP +G +C LWS
Sbjct: 142 VWQYFTDLFDYLPLTALIEDRIFCLHGGLSPSIDTLDHVRILDRVQEVPHEGPICDLLWS 201
Query: 760 XP 765
P
Sbjct: 202 DP 203
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 131 bits (316), Expect = 1e-31
Identities = 60/118 (50%), Positives = 81/118 (68%)
Frame = +3
Query: 222 QLTEIEIKGLCLKSREIFSSQPILLELEAPLKICGDIHGQYYDLLRLSEYGGFPPESNYL 401
+L+E + + K+ EI S+ L+E++AP+ +CGDIHGQYYDL++L E GG P + YL
Sbjct: 84 RLSEEQTLYIIKKATEILKSEDNLIEVDAPVTVCGDIHGQYYDLMKLFEVGGNPANTQYL 143
Query: 402 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI 575
FLGDYVDRG S+E + L A KI YP+ +LLRGNHECA + + F EC +YNI
Sbjct: 144 FLGDYVDRGYFSIECLLYLWALKIWYPKTLWLLRGNHECAHLTDYFTFKLECTHKYNI 201
Score = 66.5 bits (155), Expect = 5e-12
Identities = 28/77 (36%), Positives = 42/77 (54%)
Frame = +1
Query: 535 FMGFTMSAKGGITFKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMGQIXXIMRX 714
+ F + K+++ FN LP+AAI++++ C HGGLSP+L + I I R
Sbjct: 188 YFTFKLECTHKYNIKVYEACLQSFNALPLAAIMNKQFLCVHGGLSPELHTLNDIRMINRF 247
Query: 715 TDVPDQGLLCXXLWSXP 765
+ P GL+C LWS P
Sbjct: 248 CEPPTHGLMCDLLWSDP 264
>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 127 bits (307), Expect = 2e-30
Identities = 55/115 (47%), Positives = 75/115 (65%)
Frame = +3
Query: 225 LTEIEIKGLCLKSREIFSSQPILLELEAPLKICGDIHGQYYDLLRLSEYGGFPPESNYLF 404
L E ++K LC + I + + + P+ +CGDIHGQ+YDLL L GG P +NY+F
Sbjct: 17 LPEHQLKRLCEMVKVILMEESNIQPVRTPVTVCGDIHGQFYDLLELFRVGGELPSTNYIF 76
Query: 405 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY 569
+GD+VDRG SLET L + K +YP+ LLRGNHE I ++YGFYDEC+ +Y
Sbjct: 77 MGDFVDRGYFSLETFTLFMLLKARYPDKITLLRGNHESRQITQVYGFYDECQTKY 131
Score = 66.5 bits (155), Expect = 5e-12
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = +1
Query: 580 LWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMGQIXXIMRXTDVPDQGLLCXXLWS 759
+WK F+ L +AA++D KI C HGGLSP+++ + QI + R ++P +G C +WS
Sbjct: 136 VWKYCCQVFDFLTLAAVIDNKILCVHGGLSPEVRTLDQIRILARAQEIPHEGSFCDLMWS 195
Query: 760 XP 765
P
Sbjct: 196 DP 197
>SPBC26H8.05c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 126 bits (305), Expect = 3e-30
Identities = 57/115 (49%), Positives = 75/115 (65%)
Frame = +3
Query: 225 LTEIEIKGLCLKSREIFSSQPILLELEAPLKICGDIHGQYYDLLRLSEYGGFPPESNYLF 404
+ E + LC + R+I + + + +P+ ICGDIHGQ +DLL L GG P + YLF
Sbjct: 19 IPESNVVELCQRVRDILIEESNIQWISSPVTICGDIHGQLHDLLELFRIGGSCPGTKYLF 78
Query: 405 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY 569
LGD+VDRG S+ET LLL K KYP+ L+RGNHE I ++YGFYDEC R+Y
Sbjct: 79 LGDFVDRGFYSVETFLLLLTLKCKYPKEMTLIRGNHESRQITQVYGFYDECVRKY 133
Score = 66.5 bits (155), Expect = 5e-12
Identities = 26/62 (41%), Positives = 40/62 (64%)
Frame = +1
Query: 580 LWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMGQIXXIMRXTDVPDQGLLCXXLWS 759
+W+ + F+ L + A+VD K+FC HGGLSP + ++ QI + R +VP +G +C LWS
Sbjct: 138 VWRYCCEIFDYLSLGALVDGKVFCVHGGLSPSISSIDQIRLLDRKQEVPHEGAMCDLLWS 197
Query: 760 XP 765
P
Sbjct: 198 DP 199
>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 307
Score = 126 bits (304), Expect = 4e-30
Identities = 60/138 (43%), Positives = 87/138 (63%)
Frame = +3
Query: 156 LNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFSSQPILLELEAPLKICGDIH 335
+++DN+I++L + + + E I LC ++E+ + ++ L P+ + GDIH
Sbjct: 2 IDLDNIIERLYEKQ--------LIAESVIAYLCSLAKEVLMQESNVVRLSTPITVVGDIH 53
Query: 336 GQYYDLLRLSEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 515
GQ+ DLL + GG P +NYLFLGDYVDRG S+ETI LL+ K++YP+ LLRGNHE
Sbjct: 54 GQFDDLLEIFRIGGPCPYTNYLFLGDYVDRGYYSIETITLLICLKLRYPKRITLLRGNHE 113
Query: 516 CASINRIYGFYDECKRRY 569
I + YGFY EC R+Y
Sbjct: 114 SRGITQTYGFYSECLRKY 131
Score = 67.7 bits (158), Expect = 2e-12
Identities = 31/87 (35%), Positives = 48/87 (55%)
Frame = +1
Query: 505 ETTSVPASIGFMGFTMSAKGGITFKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQA 684
E+ + + GF + G +WK FTD F+ L ++A +D+ IFC HGGLSP +Q
Sbjct: 113 ESRGITQTYGFYSECLRKYGNAN--VWKYFTDIFDFLTLSATIDDTIFCVHGGLSPSIQH 170
Query: 685 MGQIXXIMRXTDVPDQGLLCXXLWSXP 765
+ QI + R + P +G + +WS P
Sbjct: 171 IDQILVLDRFREFPHEGPMADLVWSDP 197
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 105 bits (253), Expect = 6e-24
Identities = 55/130 (42%), Positives = 75/130 (57%), Gaps = 8/130 (6%)
Frame = +3
Query: 264 REIFSSQPILLEL----EAPLKICGDIHGQYYDLLRLSEYGGFP-PESNYLFLGDYVDRG 428
+E+ P L+++ + L ICGD HGQY+DLL + + G P P + YLF GD+VDRG
Sbjct: 192 KELLEKTPSLIDIPVKGDETLVICGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRG 251
Query: 429 KQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI*T---MEDVHR 599
S E L AYK+ YP+ F+ RGNHE +N++YGF EC+ +YN T +
Sbjct: 252 SWSTEVAFTLYAYKLLYPDAVFINRGNHETDDMNKVYGFEGECRSKYNERTFNIFSETFS 311
Query: 600 LLQLSSRCGD 629
LL L S D
Sbjct: 312 LLPLGSLISD 321
Score = 41.1 bits (92), Expect = 2e-04
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Frame = +1
Query: 505 ETTSVPASIGFMGFTMSAKGGITFKLWKTFTDCFNCLPVAAIVDEKIFCCHGGL-SPDLQ 681
ET + GF G S TF + F++ F+ LP+ +++ + HGGL S D
Sbjct: 280 ETDDMNKVYGFEGECRSKYNERTFNI---FSETFSLLPLGSLISDSYLVVHGGLFSDDNV 336
Query: 682 AMGQIXXIMRXT-DVPDQ-GLLCXXLWSXP-TGPGR 780
+ Q+ I R + P Q GL+ LW+ P PGR
Sbjct: 337 TLDQLRNIDRFSKKQPGQSGLMMEMLWTDPQPAPGR 372
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 29.1 bits (62), Expect = 0.84
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 598 DCFNCLPVAAIVDEKIFCC-HGGLSPD 675
D ++C+ + A+ ++FCC HGGL+PD
Sbjct: 646 DPYSCVRILAL---ELFCCSHGGLTPD 669
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 28.7 bits (61), Expect = 1.1
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 111 RTHTIYPMADRDTDELNIDNVIKKLL-KVRGEKPGMNVQLTEIEIKGLCLKSREIFSSQP 287
+THTI + R D I ++ LL +V G K MNV ++ ++ K R++ P
Sbjct: 140 KTHTI---SGRPDDPGIIFLTMRALLDRVEGLKRTMNVDISVSYLEIYNEKIRDLLVQDP 196
Query: 288 ILLELEAPLKICGD 329
+ +E L IC D
Sbjct: 197 LSMEKPKSLNICED 210
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 27.9 bits (59), Expect = 1.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 331 MSPQIFKGASSSSSIGCDENISLD 260
+S Q+FK SS S + CDE ++D
Sbjct: 567 VSVQVFKDGSSDSEVRCDEYAAVD 590
>SPAC19A8.08 |upf2||nonsense-mediated decay protein
Upf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1049
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -1
Query: 189 LVIFLLRYRCLTHLCLCLPSDILYVYEIWLNRIGKRREMFKIFADYE 49
++ +LL Y+C + +P D+LY +E + IG R K++ YE
Sbjct: 820 MLTYLLAYQCYFLIQPEMPLDMLYEFE---DVIGYVRPSMKVYMHYE 863
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 521 GTLVVSA*KKEILGIFNLVGEEQAYCFQRLLATVHIVSEE 402
G+L+ K ++NL G YCF RL T++ EE
Sbjct: 987 GSLLDDGTKLSDRSVYNLFGNMSLYCFFRLFHTLYSRLEE 1026
>SPAC3A11.02 |cps3|mug188|zinc finger protein
Cps3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 27.1 bits (57), Expect = 3.4
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -3
Query: 331 MSPQIFKGASSSSSIGCDENISLDFKHSPLISISVN*TFIPGFSPRTFS 185
+SP F + +I E++SL K P+++ S + + PGFS TF+
Sbjct: 266 ISPASFGSGIRTRNIFNPESMSLGLK-PPILNRSYSASMAPGFSMNTFT 313
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 26.6 bits (56), Expect = 4.5
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Frame = +3
Query: 234 IEIKGLCLKSREIFSSQPILLELEAPLKICGDIHGQYYDLLRLS------EYGGFPPESN 395
+++K + ++ +F + P + +LE L+ G + L RL EY P +
Sbjct: 122 LQVKASPIDAQYVFLAPPSIEQLEVRLRGRGT-ENESAILQRLERARAEIEYSEKPGNFD 180
Query: 396 YLFLGDYVDRGKQSLETICL 455
L + D V++ + LE ICL
Sbjct: 181 ALIVNDDVEKAYKQLEAICL 200
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 25.8 bits (54), Expect = 7.8
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +1
Query: 382 LRSPTISSSETMWTVASSRWKQYACSSPTRLNI 480
+R+ I S+ +W+ A W Y+ P R+ +
Sbjct: 2097 VRACFIQGSQQVWSAALWYWGSYSTDKPNRMGV 2129
>SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|chr
3|||Manual
Length = 923
Score = 25.8 bits (54), Expect = 7.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 375 GFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKY 479
GF + + L LG Y RGKQS + L ++ Y
Sbjct: 482 GFGEDLDCLILGGYFGRGKQSGKINSFLCGLRMDY 516
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,268,128
Number of Sequences: 5004
Number of extensions: 69192
Number of successful extensions: 208
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 422462090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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