Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_A04
(848 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80836-14|AAB37896.1| 185|Caenorhabditis elegans Hypothetical p... 33 0.19
Z70037-4|CAA93877.1| 146|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z74030-4|CAA98436.1| 113|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF040651-4|AAB95014.1| 234|Caenorhabditis elegans Hypothetical ... 29 3.2
Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL023851-1|CAA19554.1| 149|Caenorhabditis elegans Hypothetical ... 29 5.5
AF003387-3|AAM22047.1| 62|Caenorhabditis elegans Hypothetical ... 28 7.3
Z81478-2|CAB03933.1| 195|Caenorhabditis elegans Hypothetical pr... 28 9.6
AL031627-7|CAA20959.2| 200|Caenorhabditis elegans Hypothetical ... 28 9.6
>U80836-14|AAB37896.1| 185|Caenorhabditis elegans Hypothetical
protein B0432.12 protein.
Length = 185
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 129 VLLAASLGPAAAQRITT-IQLDGVQYFISRMNPYSPELNYFLSYQYCRSLGLQLASFETK 305
+LL S G A + T ++ +G+ F Y ++N+ + ++C G LA ++
Sbjct: 8 LLLWISTGSTAPAGVATYLRSNGIVAFHKL---YHLKMNFPRAKKHCEQNGAHLAGITSR 64
Query: 306 EKADSITTYLTNAGYNKYDFWTSGNNLG 389
E+A + AG + +W G G
Sbjct: 65 EEAQKLIDLANEAGESNEQYWLGGQRKG 92
>Z70037-4|CAA93877.1| 146|Caenorhabditis elegans Hypothetical
protein T27D12.3 protein.
Length = 146
Score = 31.5 bits (68), Expect = 0.78
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 336 TNAGYNKYDFWTSGNNLGTDMFLWMSTGLPFNATFN 443
T N ++ WT G+ GTD F+W TG P N +N
Sbjct: 110 TCTALNSFE-WTDGSTTGTDGFIW-KTGDPNNYLYN 143
>Z74030-4|CAA98436.1| 113|Caenorhabditis elegans Hypothetical
protein D1054.7 protein.
Length = 113
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 366 WTSGNNLGTDMFLWMSTGLPFNAT 437
WT G+ GTD F+W TG P NA+
Sbjct: 57 WTDGSTTGTDGFIW-ETGEPNNAS 79
>AF040651-4|AAB95014.1| 234|Caenorhabditis elegans Hypothetical
protein W04H10.4 protein.
Length = 234
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 336 TNAGYNKYDFWTSGNNLGTDMFLWMSTGLPFNATFN 443
T N ++ WT G+ GTD F+W G P N +N
Sbjct: 168 TCTALNSFE-WTDGSTTGTDGFIW-KAGDPNNYQYN 201
>Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical
protein F13A7.7 protein.
Length = 358
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 225 YSPELNYFLSYQYCRSLGLQ-LASFETKEKADSITTYLTNAGYNKYDFWTSG 377
Y P L+Y S R+ + LASF ++ DS T+ N G ++ + W G
Sbjct: 243 YIPNLSYSNSTSSSRASSVDSLASFNSQSSTDSQNTFRKNGGRDQLE-WKQG 293
>Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical
protein F58A4.5 protein.
Length = 786
Score = 29.1 bits (62), Expect = 4.2
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 225 YSPELNYFLSYQYCRSLGLQLASFETKEKADSITTYLTNAGY---NKYDFWTSGNNLGTD 395
Y+ ++ + +YC SLG QLA K D + Y NA N FW +NL +
Sbjct: 49 YNTPKSFQAARRYCVSLGGQLAD---KINKDDSSLYSANADLEVANSTKFWVGASNLKCN 105
Query: 396 MFLWMSTG-LPFN 431
+ W + G + FN
Sbjct: 106 I-AWENGGEIEFN 117
>AL023851-1|CAA19554.1| 149|Caenorhabditis elegans Hypothetical
protein Y68A4B.1 protein.
Length = 149
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 366 WTSGNNLGTDMFLWMSTGLPFNATFNY 446
WT G+ GTD FLW + G P N Y
Sbjct: 87 WTDGSTTGTDGFLWRN-GDPNNGGIYY 112
>AF003387-3|AAM22047.1| 62|Caenorhabditis elegans Hypothetical
protein C44B11.6 protein.
Length = 62
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 215 DESVQPRAQLFPVLSVLQIIRSSTGIVRDEGEGRFDNDLSNKCRLQ 352
+E P P L + I + EG+G + DL+N RLQ
Sbjct: 2 NEDTSPNEIAIPELEIFTTISQDMNFMHIEGDGCQEEDLANFTRLQ 47
>Z81478-2|CAB03933.1| 195|Caenorhabditis elegans Hypothetical
protein C31G12.2 protein.
Length = 195
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 366 WTSGNNLGTDMFLWMSTGLPFNA 434
WT G+ GTD ++W S G P NA
Sbjct: 138 WTDGSTTGTDGWIWRS-GEPNNA 159
>AL031627-7|CAA20959.2| 200|Caenorhabditis elegans Hypothetical
protein Y102A5C.16 protein.
Length = 200
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 366 WTSGNNLGTDMFLWMSTGLPFNATFN 443
WT G+ G+D F+W P N + N
Sbjct: 143 WTDGSATGSDAFIWNVATEPNNGSLN 168
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,161,371
Number of Sequences: 27780
Number of extensions: 396667
Number of successful extensions: 1040
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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