Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_A02
(857 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0578 + 4295386-4296489,4297394-4297507 209 2e-54
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 204 9e-53
10_02_0199 + 6668902-6669293,6669825-6669882 34 0.17
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 33 0.22
08_02_1278 - 25838146-25839411 32 0.67
03_05_0366 - 23505755-23506441 31 1.2
03_05_1062 - 30043596-30043811,30044083-30044178,30044387-300444... 30 2.1
08_02_1421 - 26961716-26963650,26967316-26967942,26969832-26970887 30 2.7
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120... 30 2.7
04_01_0588 + 7657510-7657992,7658397-7658843 29 6.3
03_05_0452 + 24464134-24464442 29 6.3
02_04_0457 + 23093020-23093343,23093798-23093806 29 6.3
10_07_0029 + 12031711-12032464,12044289-12044386 28 8.3
07_03_1387 + 26202975-26203274,26203363-26203449,26203541-262036... 28 8.3
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 209 bits (510), Expect = 2e-54
Identities = 103/207 (49%), Positives = 126/207 (60%), Gaps = 1/207 (0%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
VF+AP+RPD+V VH +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR
Sbjct: 31 VFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHR 90
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
+GQGAFGNMCRGGRMFAPTK WR+WH ARGH IE
Sbjct: 91 AGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHLRRVAVASALAATSVPSLVLARGHRIET 150
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXX 721
+PELPLV++D + I KT QA+ L+++ A++D K S
Sbjct: 151 VPELPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRNRRYINRKG 210
Query: 722 PLIIXXXD-QGLTRAFRNIPGVXXLNV 799
PLI+ + + +AFRN+PGV NV
Sbjct: 211 PLIVYGTEGSKIVKAFRNLPGVDVANV 237
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 204 bits (497), Expect = 9e-53
Identities = 102/207 (49%), Positives = 124/207 (59%), Gaps = 1/207 (0%)
Frame = +2
Query: 182 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 361
V +APIRPD+V H +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR
Sbjct: 30 VLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHR 89
Query: 362 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 541
+GQGAFGNMCRGGRMFAPTK WRRWH ARGH IE
Sbjct: 90 AGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRLRRIAVASALAATAVPSLVLARGHRIEG 149
Query: 542 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXX 721
+PE PLVV+D ++ I KT Q++ L+++ A++D K S
Sbjct: 150 VPEFPLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGKGKMRNRRYINRKG 209
Query: 722 PLIIXXXD-QGLTRAFRNIPGVXXLNV 799
PLI+ + + +AFRN+PGV NV
Sbjct: 210 PLIVYGTEGSKVVKAFRNLPGVDVANV 236
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 293 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 403
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 33.5 bits (73), Expect = 0.22
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 399 PPRHMLPKAP*PDLWVPPP 343
PPRH++P+ P P WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325
>08_02_1278 - 25838146-25839411
Length = 421
Score = 31.9 bits (69), Expect = 0.67
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -2
Query: 622 APQEDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSL 515
A +E LF L+D+LD V +G+L LF+ S++L
Sbjct: 89 AAREPQRLFRLLDMLDAVARERGRLDELFSGESATL 124
>03_05_0366 - 23505755-23506441
Length = 228
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 179 FVFKAPIRPDLVNDVHVSMSKNSR-QPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 355
++ AP D +V S + R P C S E + +AES TG A R R+ G T
Sbjct: 108 WIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAESGATGLAHTRAGRIHAGPT 167
Query: 356 HRSGQGA 376
+ + + A
Sbjct: 168 NDNDEEA 174
>03_05_1062 -
30043596-30043811,30044083-30044178,30044387-30044448,
30044990-30045023,30045220-30046173
Length = 453
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -2
Query: 613 EDDSLFGLVDLLDFVGYN--QGKLGNLFNNVSSSLNERWDASSSNGCCQGR 467
+DD +F V LLD VGYN +G++ N SL + W S CCQG+
Sbjct: 331 DDDVVFLHVKLLDLVGYNFISRTVGSILIN---SLLDAWH-SCVYICCQGK 377
>08_02_1421 - 26961716-26963650,26967316-26967942,26969832-26970887
Length = 1205
Score = 29.9 bits (64), Expect = 2.7
Identities = 31/89 (34%), Positives = 39/89 (43%)
Frame = -2
Query: 682 LTSTKTLRLVHLKDIRPCLEAPQEDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERW 503
L S TLR VHL + QE + L L L VG N+ K G F + S L++
Sbjct: 947 LKSLHTLRHVHLAWGNTVI---QEIERLTQLRKL-GVVGINK-KNGPSFYSAISKLSQLE 1001
Query: 502 DASSSNGCCQGRSPLSEVDATVPAPPGLR 416
S G CQG S +T P P L+
Sbjct: 1002 SLSVCAGWCQGLHGTSSSSSTSPPPENLQ 1030
>07_01_0172 -
1201595-1201912,1202637-1202723,1202836-1202895,
1203007-1203106,1203227-1203633,1204728-1204883,
1204981-1205106,1205503-1205572,1205679-1205767
Length = 470
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -2
Query: 262 AVGLPRVLGHRNVNIIDQVRTYGRLEYEXGGAWLHPAPSHSSLNTPTLKV 113
A P+++ ++ DQ G LE G HPAP + SL +P LKV
Sbjct: 47 ACNQPKLILQLESHLKDQQVVRGALEKALGPDPDHPAPVNLSLESPMLKV 96
>04_01_0588 + 7657510-7657992,7658397-7658843
Length = 309
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Frame = +2
Query: 215 NDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRV---RGGGTHRSGQGAFGN 385
+D+ ++ SR + + ++S+ W G R+ + GGG R G
Sbjct: 201 HDIQWGDNQPSRSSGVLPSSSEWRSSSSRWDLGEITRRMDTLDMQMGGGQQRRPPAEDGL 260
Query: 386 MCRGGRMFAPTKPWRRW 436
P PWRRW
Sbjct: 261 GWASSWFGRPNLPWRRW 277
>03_05_0452 + 24464134-24464442
Length = 102
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 235 VQELEAALLREQGGWSPNQCRIMGYRTCCCPNSA 336
V+++ ++LLR G Q ++G R C C NSA
Sbjct: 21 VEKVRSSLLRVLGLLRGGQASMLGKRACFCSNSA 54
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +2
Query: 278 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 382
G + S W G A A VRGGG RSG G G
Sbjct: 76 GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGGDEG 109
>10_07_0029 + 12031711-12032464,12044289-12044386
Length = 283
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 404 YVHHDTCYRRHPDRTYG 354
Y+ HDT YR HP R G
Sbjct: 94 YIFHDTAYRYHPRRANG 110
>07_03_1387 +
26202975-26203274,26203363-26203449,26203541-26203648,
26203708-26203980,26205242-26205355,26205900-26206268
Length = 416
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +3
Query: 432 AGTVASTSDSGERPWQQPLLLLASQRSFRLEDTLLKRFPSFPWL*PTKSRRSTRPNRLSS 611
A AST+ G RPW ++++R + R P+ W + RR+ R + +++
Sbjct: 8 AAAAASTARGGHRPWTAASRGVSARRCSVAPAQVRARGPTEWWPAAARRRRAPRRHAVAA 67
Query: 612 S*GAS 626
GA+
Sbjct: 68 KAGAA 72
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,259,322
Number of Sequences: 37544
Number of extensions: 519803
Number of successful extensions: 1870
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1860
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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