Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP18_FL5_C05
         (849 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031060-1|AAH31060.1|  852|Homo sapiens piwi-like 4 (Drosophila...    31   5.3  
AK096837-1|BAC04873.1|  666|Homo sapiens protein ( Homo sapiens ...    31   5.3  
AK093475-1|BAC04179.1|  852|Homo sapiens protein ( Homo sapiens ...    31   5.3  
AB079366-1|BAC81341.1|  852|Homo sapiens PIWIL1 protein.               31   5.3  
BC132701-1|AAI32702.1|  232|Homo sapiens chromosome 9 open readi...    30   9.2  
BC132699-1|AAI32700.1|  232|Homo sapiens chromosome 9 open readi...    30   9.2  

>BC031060-1|AAH31060.1|  852|Homo sapiens piwi-like 4 (Drosophila)
           protein.
          Length = 852

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 252 IRAVTVYNDCDAPPIQKASDPLAETLGDSVRWYLRQKCPMPEPC 121
           +RA+  Y D D   +        +T  DS++ YL   CP+P  C
Sbjct: 533 VRAIQQYVDPDVQLVMCILPSNQKTYYDSIKKYLSSDCPVPSQC 576


>AK096837-1|BAC04873.1|  666|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39518 fis, clone PUAEN2001188, moderately
           similar to Mus musculus mRNA for MIWI (piwi). ).
          Length = 666

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 252 IRAVTVYNDCDAPPIQKASDPLAETLGDSVRWYLRQKCPMPEPC 121
           +RA+  Y D D   +        +T  DS++ YL   CP+P  C
Sbjct: 347 VRAIQQYVDPDVQLVMCILPSNQKTYYDSIKKYLSSDCPVPSQC 390


>AK093475-1|BAC04179.1|  852|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36156 fis, clone TESTI2025546, weakly similar to
           Mus musculus mRNA for MIWI (piwi). ).
          Length = 852

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 252 IRAVTVYNDCDAPPIQKASDPLAETLGDSVRWYLRQKCPMPEPC 121
           +RA+  Y D D   +        +T  DS++ YL   CP+P  C
Sbjct: 533 VRAIQQYVDPDVQLVMCILPSNQKTYYDSIKKYLSSDCPVPSQC 576


>AB079366-1|BAC81341.1|  852|Homo sapiens PIWIL1 protein.
          Length = 852

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 252 IRAVTVYNDCDAPPIQKASDPLAETLGDSVRWYLRQKCPMPEPC 121
           +RA+  Y D D   +        +T  DS++ YL   CP+P  C
Sbjct: 533 VRAIQQYVDPDVQLVMCILPSNQKTYYDSIKKYLSSDCPVPSQC 576


>BC132701-1|AAI32702.1|  232|Homo sapiens chromosome 9 open reading
           frame 106 protein.
          Length = 232

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -1

Query: 180 TLGDSVRWYLRQK-CPMPEPCRRPSRYQGSQQE--PRPCFPRLQ 58
           +LG ++R  +  + CP+  PC+R    +G + +  PRPC P L+
Sbjct: 165 SLGSALRALMPGRHCPLCVPCKRGCNLRGGRGKHGPRPCCPLLR 208


>BC132699-1|AAI32700.1|  232|Homo sapiens chromosome 9 open reading
           frame 106 protein.
          Length = 232

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -1

Query: 180 TLGDSVRWYLRQK-CPMPEPCRRPSRYQGSQQE--PRPCFPRLQ 58
           +LG ++R  +  + CP+  PC+R    +G + +  PRPC P L+
Sbjct: 165 SLGSALRALMPGRHCPLCVPCKRGCNLRGGRGKHGPRPCCPLLR 208


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,944,591
Number of Sequences: 237096
Number of extensions: 2758384
Number of successful extensions: 5577
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5574
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)