Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP18_FL5_C02
         (852 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342...   208   4e-54
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327...   207   1e-53
11_01_0710 - 5830475-5830595,5831498-5834124                           29   4.7  
04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865...    29   4.7  
04_04_1477 + 33873976-33874080,33874433-33874544,33874777-338748...    28   8.2  

>12_01_0435 +
           3428552-3428636,3429242-3429352,3429434-3429738,
           3429821-3430230,3430323-3430556,3430934-3431378,
           3432300-3432390,3433292-3433518,3433786-3433861,
           3434009-3434134,3434221-3434384
          Length = 757

 Score =  208 bits (508), Expect = 4e-54
 Identities = 104/191 (54%), Positives = 126/191 (65%), Gaps = 1/191 (0%)
 Frame = +1

Query: 214 KMIRYCSVVRVIAHTQMKLLKQ-RQKKAHIMEIQLNGGAIEDKVKWAXXHLEKPIPVDSV 390
           KM +Y S+VRVIAHTQ++ +K  +QKKAH+MEIQ+NGG I DKV +     EK IPVD+V
Sbjct: 152 KMKKYASIVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAV 211

Query: 391 FAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVXRAG 570
           F +DEMID I            +RW   +LPRKTH+GLRKVACIGAWHP+RVS+TV RAG
Sbjct: 212 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAG 271

Query: 571 XKGYHHRTEMNXKIYRIGQGIHKKDGXXIKNNASTXYXLSXKSITPXGXXPPLWVX*TXF 750
             GYHHRTEMN K+Y+IG     K G    + A T +  + K ITP G  P   V    +
Sbjct: 272 QNGYHHRTEMNKKVYKIG-----KSGQE-SHAACTEFDRTEKDITPMGGFPHYGVVKGDY 325

Query: 751 XXIKGCCXGPK 783
             IKGCC GPK
Sbjct: 326 LMIKGCCVGPK 336


>11_01_0427 +
           3274817-3274901,3275587-3275697,3275979-3276283,
           3276406-3276815,3276942-3277200
          Length = 389

 Score =  207 bits (505), Expect = 1e-53
 Identities = 104/191 (54%), Positives = 125/191 (65%), Gaps = 1/191 (0%)
 Frame = +1

Query: 214 KMIRYCSVVRVIAHTQMKLLKQ-RQKKAHIMEIQLNGGAIEDKVKWAXXHLEKPIPVDSV 390
           KM +Y SVVRVI HTQ++ +K  +QKKAH+MEIQ+NGG I DKV +     EK IPVD+V
Sbjct: 152 KMKKYASVVRVIVHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAV 211

Query: 391 FAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVXRAG 570
           F +DEMID I            +RW   +LPRKTH+GLRKVACIGAWHP+RVS+TV RAG
Sbjct: 212 FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAG 271

Query: 571 XKGYHHRTEMNXKIYRIGQGIHKKDGXXIKNNASTXYXLSXKSITPXGXXPPLWVX*TXF 750
             GYHHRTEMN K+Y+IG     K G    + A T +  + K ITP G  P   V    +
Sbjct: 272 QNGYHHRTEMNKKVYKIG-----KSGQE-SHAACTEFDRTEKDITPMGGFPHYGVVKGDY 325

Query: 751 XXIKGCCXGPK 783
             IKGCC GPK
Sbjct: 326 LMIKGCCVGPK 336


>11_01_0710 - 5830475-5830595,5831498-5834124
          Length = 915

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 416 QSIISSWANTESTGIGFSRCXXAHFTLSSMAPPLSWISIM 297
           +S+ISSW  +  TG   S C   +  +     PLS  S++
Sbjct: 650 ESVISSWGGSVHTGTSSSSCSVTNLVVKFCTLPLSQWSLL 689


>04_04_1035 + 30283456-30283536,30284823-30285359,30285508-30286512,
            30286718-30287042,30287563-30287818,30287901-30288117,
            30288743-30289095,30289330-30289833,30291267-30292467,
            30292614-30292970,30293258-30293495,30294083-30295125,
            30295234-30296649,30296731-30296855,30297036-30297314,
            30297352-30297382,30298957-30299022,30299447-30299689,
            30299848-30299898,30299980-30300071,30300182-30300249,
            30300515-30300600,30300720-30300824,30300994-30301127,
            30302403-30302436,30302620-30302892,30303019-30303288,
            30303384-30303974,30304065-30304214
          Length = 3376

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 268  LLKQRQKKAHIMEIQLNGGAIEDKVKWAXXHLEKPIPVDSVFAQDEMI 411
            L  Q  K+  ++E +++  ++ D+V      L KP PV   F  DE++
Sbjct: 2664 LTSQHGKRIAVIENEVHDFSMPDRVNAINPGLAKPGPVIETFCSDELV 2711


>04_04_1477 +
           33873976-33874080,33874433-33874544,33874777-33874874,
           33875548-33876261,33876348-33876518,33876955-33877011,
           33877096-33878718
          Length = 959

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +1

Query: 295 HIMEIQLNGGAIEDKVKWAXXHLEKPIPVDS 387
           H++E + N  ++++K+K    H E  +P+DS
Sbjct: 460 HLLEDRENNESVDEKIKGDAQHEENTLPLDS 490


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,129,374
Number of Sequences: 37544
Number of extensions: 345692
Number of successful extensions: 602
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)