Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP18_FL5_C02
         (852 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   290   2e-78
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   290   2e-78
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   290   2e-78
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   290   2e-78
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   290   2e-78
AE014298-1095|AAF46302.2| 1470|Drosophila melanogaster CG1531-PB...    29   8.1  

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  290 bits (711), Expect = 2e-78
 Identities = 134/190 (70%), Positives = 146/190 (76%)
 Frame = +1

Query: 214 KMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGAIEDKVKWAXXHLEKPIPVDSVF 393
           KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVKWA  HLEKPI V +VF
Sbjct: 163 KMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVF 222

Query: 394 AQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVXRAGX 573
            QDEMIDC+            SRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TV RAG 
Sbjct: 223 GQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQ 282

Query: 574 KGYHHRTEMNXKIYRIGQGIHKKDGXXIKNNASTXYXLSXKSITPXGXXPPLWVX*TXFX 753
           KGYHHRTE+N KIYRIG GIH KDG  IKNNAST Y L+ KSITP G  P        F 
Sbjct: 283 KGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFV 342

Query: 754 XIKGCCXGPK 783
            IKGCC G K
Sbjct: 343 MIKGCCIGSK 352


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  290 bits (711), Expect = 2e-78
 Identities = 134/190 (70%), Positives = 146/190 (76%)
 Frame = +1

Query: 214 KMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGAIEDKVKWAXXHLEKPIPVDSVF 393
           KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVKWA  HLEKPI V +VF
Sbjct: 152 KMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVF 211

Query: 394 AQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVXRAGX 573
            QDEMIDC+            SRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TV RAG 
Sbjct: 212 GQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQ 271

Query: 574 KGYHHRTEMNXKIYRIGQGIHKKDGXXIKNNASTXYXLSXKSITPXGXXPPLWVX*TXFX 753
           KGYHHRTE+N KIYRIG GIH KDG  IKNNAST Y L+ KSITP G  P        F 
Sbjct: 272 KGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFV 331

Query: 754 XIKGCCXGPK 783
            IKGCC G K
Sbjct: 332 MIKGCCIGSK 341


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  290 bits (711), Expect = 2e-78
 Identities = 134/190 (70%), Positives = 146/190 (76%)
 Frame = +1

Query: 214 KMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGAIEDKVKWAXXHLEKPIPVDSVF 393
           KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVKWA  HLEKPI V +VF
Sbjct: 139 KMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVF 198

Query: 394 AQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVXRAGX 573
            QDEMIDC+            SRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TV RAG 
Sbjct: 199 GQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQ 258

Query: 574 KGYHHRTEMNXKIYRIGQGIHKKDGXXIKNNASTXYXLSXKSITPXGXXPPLWVX*TXFX 753
           KGYHHRTE+N KIYRIG GIH KDG  IKNNAST Y L+ KSITP G  P        F 
Sbjct: 259 KGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFV 318

Query: 754 XIKGCCXGPK 783
            IKGCC G K
Sbjct: 319 MIKGCCIGSK 328


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  290 bits (711), Expect = 2e-78
 Identities = 134/190 (70%), Positives = 146/190 (76%)
 Frame = +1

Query: 214 KMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGAIEDKVKWAXXHLEKPIPVDSVF 393
           KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVKWA  HLEKPI V +VF
Sbjct: 139 KMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVF 198

Query: 394 AQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVXRAGX 573
            QDEMIDC+            SRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TV RAG 
Sbjct: 199 GQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQ 258

Query: 574 KGYHHRTEMNXKIYRIGQGIHKKDGXXIKNNASTXYXLSXKSITPXGXXPPLWVX*TXFX 753
           KGYHHRTE+N KIYRIG GIH KDG  IKNNAST Y L+ KSITP G  P        F 
Sbjct: 259 KGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFV 318

Query: 754 XIKGCCXGPK 783
            IKGCC G K
Sbjct: 319 MIKGCCIGSK 328


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  290 bits (711), Expect = 2e-78
 Identities = 134/190 (70%), Positives = 146/190 (76%)
 Frame = +1

Query: 214 KMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGAIEDKVKWAXXHLEKPIPVDSVF 393
           KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVKWA  HLEKPI V +VF
Sbjct: 152 KMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVF 211

Query: 394 AQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVXRAGX 573
            QDEMIDC+            SRWHTKKLPRKTHKGLRKVACIGAWHPSRVS TV RAG 
Sbjct: 212 GQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQ 271

Query: 574 KGYHHRTEMNXKIYRIGQGIHKKDGXXIKNNASTXYXLSXKSITPXGXXPPLWVX*TXFX 753
           KGYHHRTE+N KIYRIG GIH KDG  IKNNAST Y L+ KSITP G  P        F 
Sbjct: 272 KGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFV 331

Query: 754 XIKGCCXGPK 783
            IKGCC G K
Sbjct: 332 MIKGCCIGSK 341


>AE014298-1095|AAF46302.2| 1470|Drosophila melanogaster CG1531-PB
            protein.
          Length = 1470

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = +1

Query: 16   SVRHILNFSAGIGLFVGVTNRHILI 90
            +VRH L+   GIG+F+ VT+ +I++
Sbjct: 1383 AVRHTLSCGGGIGIFLVVTSTYIIV 1407


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,615,006
Number of Sequences: 53049
Number of extensions: 589509
Number of successful extensions: 1130
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)