Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP18_FL5_C02
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 243 1e-64
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 243 1e-64
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 243 1e-64
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 243 1e-64
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 243 1e-64
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 243 1e-64
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 149 2e-36
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 149 2e-36
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 29 5.5
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 243 bits (595), Expect = 1e-64
Identities = 114/190 (60%), Positives = 138/190 (72%)
Frame = +1
Query: 214 KMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGAIEDKVKWAXXHLEKPIPVDSVF 393
K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGG IE KV WA HLEK + VD+VF
Sbjct: 152 KLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVF 211
Query: 394 AQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVXRAGX 573
AQDEMID I SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTV RAG
Sbjct: 212 AQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 271
Query: 574 KGYHHRTEMNXKIYRIGQGIHKKDGXXIKNNASTXYXLSXKSITPXGXXPPLWVX*TXFX 753
KG+HHRT +N KIYRIG+ ++G KNN ST + L+ K+ITP G P + +
Sbjct: 272 KGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 328
Query: 754 XIKGCCXGPK 783
++G GPK
Sbjct: 329 MLRGAVLGPK 338
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 243 bits (595), Expect = 1e-64
Identities = 114/190 (60%), Positives = 138/190 (72%)
Frame = +1
Query: 214 KMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGAIEDKVKWAXXHLEKPIPVDSVF 393
K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGG IE KV WA HLEK + VD+VF
Sbjct: 152 KLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVF 211
Query: 394 AQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVXRAGX 573
AQDEMID I SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTV RAG
Sbjct: 212 AQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 271
Query: 574 KGYHHRTEMNXKIYRIGQGIHKKDGXXIKNNASTXYXLSXKSITPXGXXPPLWVX*TXFX 753
KG+HHRT +N KIYRIG+ ++G KNN ST + L+ K+ITP G P + +
Sbjct: 272 KGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 328
Query: 754 XIKGCCXGPK 783
++G GPK
Sbjct: 329 MLRGAVLGPK 338
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 243 bits (595), Expect = 1e-64
Identities = 114/190 (60%), Positives = 138/190 (72%)
Frame = +1
Query: 214 KMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGAIEDKVKWAXXHLEKPIPVDSVF 393
K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGG IE KV WA HLEK + VD+VF
Sbjct: 54 KLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVF 113
Query: 394 AQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVXRAGX 573
AQDEMID I SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTV RAG
Sbjct: 114 AQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 173
Query: 574 KGYHHRTEMNXKIYRIGQGIHKKDGXXIKNNASTXYXLSXKSITPXGXXPPLWVX*TXFX 753
KG+HHRT +N KIYRIG+ ++G KNN ST + L+ K+ITP G P + +
Sbjct: 174 KGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 230
Query: 754 XIKGCCXGPK 783
++G GPK
Sbjct: 231 MLRGAVLGPK 240
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 243 bits (595), Expect = 1e-64
Identities = 114/190 (60%), Positives = 138/190 (72%)
Frame = +1
Query: 214 KMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGAIEDKVKWAXXHLEKPIPVDSVF 393
K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGG IE KV WA HLEK + VD+VF
Sbjct: 152 KLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVF 211
Query: 394 AQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVXRAGX 573
AQDEMID I SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTV RAG
Sbjct: 212 AQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 271
Query: 574 KGYHHRTEMNXKIYRIGQGIHKKDGXXIKNNASTXYXLSXKSITPXGXXPPLWVX*TXFX 753
KG+HHRT +N KIYRIG+ ++G KNN ST + L+ K+ITP G P + +
Sbjct: 272 KGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 328
Query: 754 XIKGCCXGPK 783
++G GPK
Sbjct: 329 MLRGAVLGPK 338
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 243 bits (595), Expect = 1e-64
Identities = 114/190 (60%), Positives = 138/190 (72%)
Frame = +1
Query: 214 KMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGAIEDKVKWAXXHLEKPIPVDSVF 393
K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGG IE KV WA HLEK + VD+VF
Sbjct: 54 KLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVF 113
Query: 394 AQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVXRAGX 573
AQDEMID I SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTV RAG
Sbjct: 114 AQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 173
Query: 574 KGYHHRTEMNXKIYRIGQGIHKKDGXXIKNNASTXYXLSXKSITPXGXXPPLWVX*TXFX 753
KG+HHRT +N KIYRIG+ ++G KNN ST + L+ K+ITP G P + +
Sbjct: 174 KGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 230
Query: 754 XIKGCCXGPK 783
++G GPK
Sbjct: 231 MLRGAVLGPK 240
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 243 bits (595), Expect = 1e-64
Identities = 114/190 (60%), Positives = 138/190 (72%)
Frame = +1
Query: 214 KMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGAIEDKVKWAXXHLEKPIPVDSVF 393
K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGG IE KV WA HLEK + VD+VF
Sbjct: 152 KLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVF 211
Query: 394 AQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVXRAGX 573
AQDEMID I SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTV RAG
Sbjct: 212 AQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQ 271
Query: 574 KGYHHRTEMNXKIYRIGQGIHKKDGXXIKNNASTXYXLSXKSITPXGXXPPLWVX*TXFX 753
KG+HHRT +N KIYRIG+ ++G KNN ST + L+ K+ITP G P + +
Sbjct: 272 KGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 328
Query: 754 XIKGCCXGPK 783
++G GPK
Sbjct: 329 MLRGAVLGPK 338
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 149 bits (361), Expect = 2e-36
Identities = 72/132 (54%), Positives = 86/132 (65%)
Frame = +1
Query: 388 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVXRA 567
V A +MID I SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTV RA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 568 GXKGYHHRTEMNXKIYRIGQGIHKKDGXXIKNNASTXYXLSXKSITPXGXXPPLWVX*TX 747
G KG+HHRT +N KIYRIG+ ++G KNN ST + L+ K+ITP G P +
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 748 FXXIKGCCXGPK 783
+ ++G GPK
Sbjct: 279 YIMLRGAVLGPK 290
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 214 KMIRYCSVVRVIAHTQM 264
K+ +YCS +RVIAHTQM
Sbjct: 152 KLKKYCSSIRVIAHTQM 168
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 149 bits (361), Expect = 2e-36
Identities = 72/132 (54%), Positives = 86/132 (65%)
Frame = +1
Query: 388 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVXRA 567
V A +MID I SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTV RA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 568 GXKGYHHRTEMNXKIYRIGQGIHKKDGXXIKNNASTXYXLSXKSITPXGXXPPLWVX*TX 747
G KG+HHRT +N KIYRIG+ ++G KNN ST + L+ K+ITP G P +
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 748 FXXIKGCCXGPK 783
+ ++G GPK
Sbjct: 279 YIMLRGAVLGPK 290
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 214 KMIRYCSVVRVIAHTQM 264
K+ +YCS +RVIAHTQM
Sbjct: 152 KLKKYCSSIRVIAHTQM 168
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 460 RWHTKKLP-RKTHKGLRKVACIGAWHPSRVSFTVXRAGXKGYHHRTEMNXKIYRI 621
RW + P R+T K R++ +G+ +R+ G GY RT +I RI
Sbjct: 241 RWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTVSGLEIVRI 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,168,284
Number of Sequences: 27780
Number of extensions: 304510
Number of successful extensions: 611
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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