Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP18_FL5_B23
(839 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 57 2e-10
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 57 2e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 56 3e-10
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 53 4e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 52 5e-09
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 51 1e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 51 2e-08
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 50 2e-08
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 50 3e-08
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 50 4e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 49 5e-08
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 49 6e-08
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 49 6e-08
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 48 8e-08
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 48 8e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 48 1e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 48 1e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 47 2e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 44 2e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 42 5e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 42 7e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 39 5e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 36 4e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 34 0.002
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 30 0.031
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.093
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.6
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 6.1
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 57.2 bits (132), Expect = 2e-10
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 7/147 (4%)
Frame = +1
Query: 121 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 288
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 289 IDKRLSWNAGEWGCSTWLVXSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSCI 459
+D+RL++ G+ + + R+W+PD N + T R+ +G V
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 460 KRLDIXTPISMQXDNWPNDMQTCTFKF 540
RL I M +N+P D Q C +F
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQF 148
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 57.2 bits (132), Expect = 2e-10
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Frame = +1
Query: 115 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 279
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 280 MNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 450
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 451 SCIKRLDIXTPISMQXDN--WPNDMQTCT 531
C+ TP+ + D+ WP D+ CT
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCT 174
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 56.4 bits (130), Expect = 3e-10
Identities = 47/157 (29%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Frame = +1
Query: 97 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 255
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 256 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VXSERLWRPDVVLLNAAATTAGDYAL-RAR 429
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 430 VSNNGSVSCIKRLDIXTPISMQXDNWPNDMQTCTFKF 540
+ G V + + +P D QTC KF
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 52.8 bits (121), Expect = 4e-09
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Frame = +1
Query: 118 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 285
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 286 WIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 453
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 454 CIKRLDIXTPISMQXDNWPNDMQTCTFKF 540
C+ + + +WP D C F
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINF 187
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 52.4 bits (120), Expect = 5e-09
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Frame = +1
Query: 115 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 273
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 274 LQMNWIDKRLSWNAGEWGCSTWL-VXSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 447
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 448 VSCIKRLDIXTPISMQXDNWPNDMQTCTFKF 540
V + + + +P D QTC KF
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKF 167
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 51.2 bits (117), Expect = 1e-08
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 405
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 406 GDYALRARVSNNGSVSCIKRLDIXTPISMQXDNWPNDMQTCTFKF 540
G Y V++NGS + + + +P D Q C KF
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKF 197
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 51.2 bits (117), Expect = 1e-08
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 405
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 406 GDYALRARVSNNGSVSCIKRLDIXTPISMQXDNWPNDMQTCTFKF 540
G Y V++NGS + + + +P D Q C KF
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKF 197
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 50.8 bits (116), Expect = 2e-08
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 405
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGSVSCIKRLDIXTPISMQXDNWPNDMQTCTFKF 540
G Y V++NGS + + + +P D Q C KF
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKF 129
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 50.4 bits (115), Expect = 2e-08
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Frame = +1
Query: 193 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWR 366
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 367 PDVVLLNAAATTAGDYALRAR----VSNNGSVSCIKRLDIXTPISMQXDNWPNDMQTCTF 534
PD+VL N A G+Y +R + + NG V + + ++ +P D QTC
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 535 KF 540
KF
Sbjct: 168 KF 169
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 50.0 bits (114), Expect = 3e-08
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 405
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGSVSCIKRLDIXTPISMQXDNWPNDMQTCTFKF 540
G Y V+++GS + + M +P D Q C KF
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKF 129
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 50.0 bits (114), Expect = 3e-08
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 405
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGSVSCIKRLDIXTPISMQXDNWPNDMQTCTFKF 540
G Y V+++GS + + M +P D Q C KF
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKF 129
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 50.0 bits (114), Expect = 3e-08
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Frame = +1
Query: 142 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 306
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 307 WNAGEWGCSTWL-VXSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSCIKRLDIXT 480
W E+G L V S+ +WRPD+VL NA A +A + + G V +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 481 PISMQXDNWPNDMQTCTFKF 540
+ + +P D QTC KF
Sbjct: 152 SCEIDVEYFPFDEQTCVLKF 171
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 49.6 bits (113), Expect = 4e-08
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 12/163 (7%)
Frame = +1
Query: 88 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 246
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 247 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVXSERLWRPDVVLLNAAATTAGDYAL- 420
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 421 ---RARVSNNGSVSCIKRLDIXTPISMQXDNWPNDMQTCTFKF 540
+A + + G V + + + +P D QTC KF
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKF 163
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 49.2 bits (112), Expect = 5e-08
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Frame = +1
Query: 142 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 300
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 301 LSWNAGEWGCSTWL-VXSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSCIKR 465
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VS
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPP 151
Query: 466 LDIXTPISMQXDNWPNDMQTCTFKF 540
+ + + +P D Q+C KF
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKF 176
Score = 28.7 bits (61), Expect = 0.071
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 603 ILYILXSITKSIWSXLCILXPELERASLHVVGPIV-XLHRNW 481
+L+ + +T SIW +C+L S H + P V + NW
Sbjct: 316 LLFTMILVTLSIWITVCVLNVHFRSPSTHNMSPWVRQVFLNW 357
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 48.8 bits (111), Expect = 6e-08
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 405
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGSVSCIKRLDIXTPISMQXDNWPNDMQTCTFKF 540
G Y V+++GS + + + +P D Q C KF
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKF 129
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 48.8 bits (111), Expect = 6e-08
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 7/156 (4%)
Frame = +1
Query: 94 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 258
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 259 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VXSERLWRPDVVLLNAA-ATTAGDYALRARV 432
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 433 SNNGSVSCIKRLDIXTPISMQXDNWPNDMQTCTFKF 540
NNG+ + + + +P D Q C KF
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKF 166
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +3
Query: 456 HKALGHXHSNFYAXRQLAQRHA 521
H +GH HS+ +A HA
Sbjct: 416 HHTMGHGHSHIHATPHHHHSHA 437
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 48.4 bits (110), Expect = 8e-08
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 405
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGSVSCIKRLDIXTPISMQXDNWPNDMQTCTFKF 540
G Y V+++GS + + + +P D Q C KF
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKF 129
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 48.4 bits (110), Expect = 8e-08
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPDVVLLNAA-ATTA 405
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGSVSCIKRLDIXTPISMQXDNWPNDMQTCTFKF 540
G Y V+++GS + + + +P D Q C KF
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKF 129
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.0 bits (109), Expect = 1e-07
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Frame = +1
Query: 130 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 294
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 295 KRLSWNAGEWGCSTWLVXSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSCIKR 465
RLS+ S + ER+WRPD N + + R+S +G + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 466 LDIXTPISMQXDNWPNDMQTC 528
L I M+ N+P D Q+C
Sbjct: 156 LTIKAKCPMELRNFPMDRQSC 176
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 47.6 bits (108), Expect = 1e-07
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Frame = +1
Query: 142 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 306
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 307 WNAGEWGCSTWL-VXSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSCIKRLD 471
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 472 IXTPISMQXDNWPNDMQTCTFK 537
+ S+ + +P D+QTC K
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLK 170
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 46.8 bits (106), Expect = 2e-07
Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 3/118 (2%)
Frame = +1
Query: 196 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVXSERLWRPD 372
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 373 VVLLNAAATTAGDYALRAR--VSNNGSVSCIKRLDIXTPISMQXDNWPNDMQTCTFKF 540
+L N A + VS+ G V + + + + +P D Q C K+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKW 149
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.6 bits (98), Expect = 2e-06
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Frame = +1
Query: 121 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 288
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 289 IDKRLSWNAGEWGCSTWLVXSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 441
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 442 GSVSCIKRLDIXTPISMQXDNWPNDMQTC 528
GS++ RL I M +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 42.3 bits (95), Expect = 5e-06
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 13/149 (8%)
Frame = +1
Query: 121 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 288
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 289 IDKRLSWNAGEWGCSTWLVXSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 441
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 442 GSVSCIKRLDIXTPISMQXDNWPNDMQTC 528
GS++ RL I M +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.9 bits (94), Expect = 7e-06
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 12/144 (8%)
Frame = +1
Query: 142 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 300
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 301 LSWN--AGEWGCSTWLVXSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSCIKR 465
L +N G T L + R+W PD+ N + + R+ NGSV R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 466 LDIXTPISMQXDNWPNDMQTCTFK 537
+ + M +P D Q C+ +
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 39.1 bits (87), Expect = 5e-05
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 12/144 (8%)
Frame = +1
Query: 142 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 300
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 301 LSWN--AGEWGCSTWLVXSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSCIKR 465
L +N G T L + R+W PD+ N + + R+ NGSV R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 466 LDIXTPISMQXDNWPNDMQTCTFK 537
+ + M +P D Q C+ +
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 36.3 bits (80), Expect = 4e-04
Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 3/102 (2%)
Frame = +1
Query: 235 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVXSERLWRPDVVLLNAAATTAGDY 414
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 415 ALR---ARVSNNGSVSCIKRLDIXTPISMQXDNWPNDMQTCT 531
R R+S +GSV+ R M +P D Q CT
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 33.9 bits (74), Expect = 0.002
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Frame = +1
Query: 286 WIDKRLSWNAGEWGCSTWLVXSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 438
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 439 NGSVSCIKRLDIXTPISMQXDNWPNDMQTC 528
+GS++ RL I M +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 29.9 bits (64), Expect = 0.031
Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVXSERLWRPDVVLLNAAATTA 405
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 406 GDYALRAR---VSNNGSVSCIKRLDIXTPISMQXDNWPNDMQTCT 531
+ ++ + ++ ++ + +L + +M+ +++P+D Q C+
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICS 147
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 28.3 bits (60), Expect = 0.093
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = +1
Query: 196 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVXSER 357
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 358 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSCIKRLDIXTPISMQXDNWPNDMQ 522
LW+PD LNA + AL + S+ N +V R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 523 TC 528
C
Sbjct: 129 IC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 339 PSAAAPLPCVPTQS 298
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 6.1
Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +1
Query: 352 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSCIKRLDIXTPISMQXDNWPNDMQ 522
+ +WRPD NA + T + + + ++ + +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 523 TC 528
C
Sbjct: 176 EC 177
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,662
Number of Sequences: 438
Number of extensions: 4002
Number of successful extensions: 68
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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