Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP18_FL5_B21
(871 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 65 9e-13
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 65 9e-13
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 64 2e-12
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 63 3e-12
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 63 3e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 63 4e-12
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 62 6e-12
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 62 9e-12
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 62 9e-12
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 61 1e-11
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 60 3e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 57 2e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 57 2e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 56 4e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 56 6e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 53 4e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 51 2e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 51 2e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 47 3e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 45 1e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 7e-06
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 39 5e-05
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 39 5e-05
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 39 5e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 39 5e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 39 7e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 35 0.001
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 33 0.005
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 32 0.006
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 32 0.008
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.13
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 4.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 6.4
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 64.9 bits (151), Expect = 9e-13
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Frame = +1
Query: 118 STRSSQRTIGTPPPHSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEW 297
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 298 GCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSXIKRLDISTPISMQL 471
G L ++ +LW+PD+++ N+A G Y V++NGS + + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 472 DNWPNDMQTCTFKFGSRMHNXDQMDFVI 555
+P D Q C KFGS ++ +Q+D V+
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 64.9 bits (151), Expect = 9e-13
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Frame = +1
Query: 118 STRSSQRTIGTPPPHSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEW 297
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 298 GCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSXIKRLDISTPISMQL 471
G L ++ +LW+PD+++ N+A G Y V++NGS + + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 472 DNWPNDMQTCTFKFGSRMHNXDQMDFVI 555
+P D Q C KFGS ++ +Q+D V+
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 64.1 bits (149), Expect = 2e-12
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 205 NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 378
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 379 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDQMDFVI 555
G Y V++NGS + + + + +P D Q C KFGS ++ +Q+D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 63.3 bits (147), Expect = 3e-12
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 205 NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 378
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 379 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDQMDFVI 555
G Y V+++GS + + M + +P D Q C KFGS ++ +Q+D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 63.3 bits (147), Expect = 3e-12
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Frame = +1
Query: 166 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWR 339
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 340 PDVVLLNAAATTAGDYALRAR----VSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTF 507
PD+VL N A G+Y +R + + NG V + + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 508 KFGSRMHNXDQMDFVI--DKRXYSMFD---SXAWDV 600
KFGS N DQ+ + +K + D S WD+
Sbjct: 168 KFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 62.9 bits (146), Expect = 4e-12
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 205 NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 378
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 379 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDQMDFVI 555
G Y V+++GS + + M + +P D Q C KFGS ++ +Q+D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 62.1 bits (144), Expect = 6e-12
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 205 NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 378
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 379 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDQMDFVI 555
G Y V+++GS + + + + +P D Q C KFGS ++ +Q+D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 61.7 bits (143), Expect = 9e-12
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 205 NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 378
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 379 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDQMDFVI 555
G Y V+++GS + + + + +P D Q C KFGS ++ +Q+D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 61.7 bits (143), Expect = 9e-12
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 205 NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 378
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 379 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDQMDFVI 555
G Y V+++GS + + + + +P D Q C KFGS ++ +Q+D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 60.9 bits (141), Expect = 1e-11
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Frame = +1
Query: 151 PPPHSKIVVNLTLHL--RHANIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVS 321
P +I N+T+ L + + S + + + + + W D L W ++ G + V
Sbjct: 61 PISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVK 120
Query: 322 SERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 492
S+ +W PD+ + N+ T G V ++GSVS + + + +WP D
Sbjct: 121 SDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDT 180
Query: 493 QTCTFKFGSRMHNXDQMDFVIDKRXYSM 576
C FGS +H+ ++++ +DK+ + M
Sbjct: 181 HRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 59.7 bits (138), Expect = 3e-11
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 6/164 (3%)
Frame = +1
Query: 133 QRTIGTPPPHSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTW 312
+R +G + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 313 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPN 486
L + RLW+PDV++ N+A G Y V NNG+ + + + + +P
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPF 157
Query: 487 DMQTCTFKFGSRMHNXDQMDFVIDKR----XYSMFDSXAWDVTG 606
D Q C KFGS ++ Q+D + S + WD+ G
Sbjct: 158 DDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDLLG 201
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 57.2 bits (132), Expect = 2e-10
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Frame = +1
Query: 247 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 420
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 421 VSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDQMD 546
V + + ++ +P D QTC KFGS ++ Q+D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 56.8 bits (131), Expect = 2e-10
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Frame = +1
Query: 247 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 411
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 412 NGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDQMD 546
G VS + + ++ +P D Q+C KFGS +N Q+D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
Score = 23.8 bits (49), Expect = 2.1
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -3
Query: 575 ILYXLLSITKSIWSXLCIL 519
+L+ ++ +T SIW +C+L
Sbjct: 316 LLFTMILVTLSIWITVCVL 334
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.0 bits (129), Expect = 4e-10
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Frame = +1
Query: 166 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWR 339
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 340 PDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 516
PD+VL N A A +A + + G V + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 517 SRMHNXDQMD 546
S ++ ++D
Sbjct: 173 SWTYDGFKVD 182
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 55.6 bits (128), Expect = 6e-10
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Frame = +1
Query: 169 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLW 336
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 337 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKF 513
PD+VL N A G + +A + G V + + + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 514 GSRMHNXDQMD 546
GS ++ Q+D
Sbjct: 164 GSWTYDGIQID 174
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 53.6 bits (123), Expect = 2e-09
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Frame = +1
Query: 166 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWR 339
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 340 PDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTF 507
PD+VL N A G+Y + +A V +G V + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 508 KFGSRMHNXDQMD 546
K GS ++ ++D
Sbjct: 170 KLGSWTYDGFKVD 182
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 52.8 bits (121), Expect = 4e-09
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Frame = +1
Query: 208 IRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 378
I E + T + + +W+D+RL + G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 379 GDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 519
R+ +G V RL I M L+N+P D Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 50.8 bits (116), Expect = 2e-08
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Frame = +1
Query: 136 RTIGTPPPHSKIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEWG-CST 309
R +G + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 310 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISMQLDN 477
V SE +W PD+VL N A G+Y + +A + + G V + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 478 WPNDMQTCTFKFGSRMHNXDQMD 546
+P D QTC KFGS ++ +D
Sbjct: 152 FPFDEQTCFMKFGSWTYDGYTVD 174
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 50.8 bits (116), Expect = 2e-08
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Frame = +1
Query: 169 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPD 345
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 346 VVLLNAAATTAGDYALRAR--VSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 519
+L N A + VS+ G V + + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 520 RMHNXDQMD 546
++ Q++
Sbjct: 152 WTYDGYQLE 160
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 47.6 bits (108), Expect = 1e-07
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
Frame = +1
Query: 151 PPPHSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSE 327
P + ++ L ++H N+ E TV L++ W L W + E+ ++ V S
Sbjct: 54 PEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSY 113
Query: 328 RLWRPDVVL--LNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDN--WPNDMQ 495
+W PD+V+ + + ++ V N+G++ + TP+ + D+ WP D+
Sbjct: 114 EIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDIL 171
Query: 496 TCTFKFGSRMHNXDQM 543
CT S H +++
Sbjct: 172 NCTIHIASWSHGSNEI 187
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 46.8 bits (106), Expect = 3e-07
Identities = 34/129 (26%), Positives = 52/129 (40%), Gaps = 7/129 (5%)
Frame = +1
Query: 154 PPHSK---IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWLVS 321
P H K VV + +R + E + + + +W D RL + S +
Sbjct: 54 PTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKM 113
Query: 322 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 492
ER+WRPD N + + R+S +G + RL I M+L N+P D
Sbjct: 114 LERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDR 173
Query: 493 QTCTFKFGS 519
Q+C GS
Sbjct: 174 QSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.8 bits (101), Expect = 1e-06
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Frame = +1
Query: 172 VVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLXWN--AGEWGCSTWLVSSERLWRP 342
+V + L +R A I + + +Q + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 343 DVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKF 513
D+ N + + R+ NGSV R+ ++ M L +P D Q C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRM 178
Query: 514 GSRMHNXDQMDFV 552
S D + F+
Sbjct: 179 ASYGWTTDDLVFL 191
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.9 bits (94), Expect = 7e-06
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 6/133 (4%)
Frame = +1
Query: 172 VVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLXWN--AGEWGCSTWLVSSERLWRP 342
VV + + +R + I + +Q + W+D+RL +N G T L + R+W P
Sbjct: 60 VVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 343 DVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKF 513
D+ N + + R+ NGSV R+ ++ M L +P D Q C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRM 178
Query: 514 GSRMHNXDQMDFV 552
S D + F+
Sbjct: 179 ASYGWTTDDLVFL 191
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 39.1 bits (87), Expect = 5e-05
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 4/149 (2%)
Frame = +1
Query: 118 STRSSQRTIGTPPPHSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLXW-NAG 291
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 292 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISM 465
++ + + +W PD ++ R+ NG+V+ + R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 466 QLDNWPNDMQTCTFKFGSRMHNXDQMDFV 552
+L+ +P D C+F S + + +V
Sbjct: 189 RLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 39.1 bits (87), Expect = 5e-05
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 4/149 (2%)
Frame = +1
Query: 118 STRSSQRTIGTPPPHSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLXW-NAG 291
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 292 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISM 465
++ + + +W PD ++ R+ NG+V+ + R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 466 QLDNWPNDMQTCTFKFGSRMHNXDQMDFV 552
+L+ +P D C+F S + + +V
Sbjct: 189 RLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 39.1 bits (87), Expect = 5e-05
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 4/149 (2%)
Frame = +1
Query: 118 STRSSQRTIGTPPPHSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLXW-NAG 291
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 292 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISM 465
++ + + +W PD ++ R+ NG+V+ + R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 466 QLDNWPNDMQTCTFKFGSRMHNXDQMDFV 552
+L+ +P D C+F S + + +V
Sbjct: 189 RLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.1 bits (87), Expect = 5e-05
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Frame = +1
Query: 208 IRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 387
I E I L W D+RL ++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 388 ALR---ARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 519
R R+S +GSV+ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 38.7 bits (86), Expect = 7e-05
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 10/135 (7%)
Frame = +1
Query: 145 GTPPPHSKIVVNLTLH-LRHANIRESESTVRIQADLQMNWIDKRLXWNAGEWGCSTWLVS 321
G PP + V +T++ L +++ E + + + W D RL + G T V
Sbjct: 32 GGPP----VEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAFKK-RTGVETLSVG 86
Query: 322 SE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLD 474
SE +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L
Sbjct: 87 SEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQ 143
Query: 475 NWPNDMQTCTFKFGS 519
+P D Q C + S
Sbjct: 144 YFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Frame = +1
Query: 259 WIDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 411
W D RL + G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 412 NGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 519
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Frame = +1
Query: 259 WIDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 411
W D RL + G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 412 NGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGS 519
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 34.7 bits (76), Expect = 0.001
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 5/121 (4%)
Frame = +1
Query: 205 NIRESESTVRIQADLQMNWIDKRLXW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 378
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 379 GDYALRAR---VSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDQMDF 549
+ ++ + ++ ++ + +L + +M+ +++P+D Q C+ S H + F
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162
Query: 550 V 552
+
Sbjct: 163 I 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 32.7 bits (71), Expect = 0.005
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +1
Query: 325 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIKRLDISTPISMQLDNWPNDMQ 495
+ +WRPD NA + T + + + ++ + +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 496 TCTFKFGSRMHNXDQMDFVID 558
C + S H D+M F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 32.3 bits (70), Expect = 0.006
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 4/132 (3%)
Frame = +1
Query: 169 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLXW-NAGEWGCSTWLVSSERLWRP 342
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 343 DV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTFKFG 516
D ++ R+ NG+V+ + R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 517 SRMHNXDQMDFV 552
S + + +V
Sbjct: 257 SISYEQTAITYV 268
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.9 bits (69), Expect = 0.008
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = +1
Query: 331 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTC 501
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 502 TFKFGSRMHNXDQMDFVIDKRXYSMFD 582
F S HN M D+ + D
Sbjct: 157 PLIFESWTHNVLDMVLYWDQEPIILAD 183
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.9 bits (59), Expect = 0.13
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = +1
Query: 169 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLX-----WNAGEWGCSTWLVSSER 330
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 331 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSXIKRLDISTPISMQLDNWPNDMQ 495
LW+PD LNA + AL + S+ N +V R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 496 TC 501
C
Sbjct: 129 IC 130
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -3
Query: 110 GQ*CCVFAFCRTSYSTSEEKRVTRII 33
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 312 PSAAAPLPCVPXQS 271
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,202
Number of Sequences: 438
Number of extensions: 4493
Number of successful extensions: 78
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -