Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP18_FL5_B15
(888 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 7e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.003
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 29 0.057
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 29 0.057
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 28 0.13
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 28 0.13
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.17
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.17
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 27 0.17
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 27 0.23
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 26 0.40
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.70
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.70
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.70
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.70
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.70
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.70
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.70
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.70
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.70
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 25 1.2
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 25 1.2
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 25 1.2
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 24 1.6
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 24 1.6
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 4.9
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 8.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 8.6
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 35.5 bits (78), Expect = 7e-04
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +3
Query: 117 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 281
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 282 MNWIDKRLXWNA 317
+ W L W +
Sbjct: 88 LMWEQSHLTWKS 99
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 33.5 bits (73), Expect = 0.003
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +3
Query: 123 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 290
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 291 IDKRLXWNAG 320
+D+RL + G
Sbjct: 62 VDRRLAFQGG 71
Score = 25.4 bits (53), Expect = 0.70
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 431 RVSNNGSVSCIXRLDIXTPXSMQXDNWPNDMQTCXFXXG 547
R+ +G V RL I M +N+P D Q C G
Sbjct: 111 RLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFG 149
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 29.1 bits (62), Expect = 0.057
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 431 RVSNNGSVSCIXRLDIXTPXSMQXDNWPNDMQTCXFXXG 547
R+S +G + RL I M+ N+P D Q+C G
Sbjct: 143 RISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILG 181
Score = 22.2 bits (45), Expect = 6.5
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 355 ERLWRPDVVLLN 390
ER+WRPD N
Sbjct: 115 ERIWRPDTYFYN 126
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 29.1 bits (62), Expect = 0.057
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +2
Query: 404 PPGTALSAARVSNNGSVSCIXRLDIXTPXSMQXDNWPNDMQTCXFXXG 547
PP T L V ++GSVSC+ + + +WP D C G
Sbjct: 145 PPTTCL----VFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFG 188
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 27.9 bits (59), Expect = 0.13
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Frame = +3
Query: 144 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 302
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 303 LXWN 314
L +N
Sbjct: 95 LRFN 98
Score = 22.6 bits (46), Expect = 4.9
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +2
Query: 431 RVSNNGSVSCIXRLDIXTPXSMQXDNWPNDMQTC 532
R+ NGSV R+ + M +P D Q C
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVC 174
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 27.9 bits (59), Expect = 0.13
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 328 GCSTWLVSSERLWRPDVVLLNAA 396
G T V SE +W PD+VL N A
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA 113
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.17
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAA 396
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.17
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAA 396
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 27.5 bits (58), Expect = 0.17
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAA 396
V S+ +WRPD+VL N A
Sbjct: 101 VPSDHIWRPDIVLYNNA 117
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 27.1 bits (57), Expect = 0.23
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 322 EWGCSTWL-VSSERLWRPDVVLLNAA 396
E+G T L V SE +W PD+VL N A
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNA 113
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 26.2 bits (55), Expect = 0.40
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 328 GCSTWLVSSERLWRPDVVLLNAA 396
G V SE +W PD+VL N A
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA 126
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 234 NIRESESTVRIQADLQMNWIDKRLXWNAGXVG 329
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.2
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAA 396
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 234 NIRESESTVRIQADLQMNWIDKRLXWNAGXVG 329
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.2
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAA 396
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 234 NIRESESTVRIQADLQMNWIDKRLXWNAGXVG 329
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.2
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAA 396
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 234 NIRESESTVRIQADLQMNWIDKRLXWNAGXVG 329
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.2
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAA 396
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 234 NIRESESTVRIQADLQMNWIDKRLXWNAGXVG 329
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.2
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAA 396
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 234 NIRESESTVRIQADLQMNWIDKRLXWNAGXVG 329
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.2
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAA 396
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 234 NIRESESTVRIQADLQMNWIDKRLXWNAGXVG 329
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
Score = 24.6 bits (51), Expect = 1.2
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAA 396
++ +LW+PD+++ N+A
Sbjct: 131 ITPNKLWKPDILMYNSA 147
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 234 NIRESESTVRIQADLQMNWIDKRLXWNAGXVG 329
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
Score = 24.6 bits (51), Expect = 1.2
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAA 396
++ +LW+PD+++ N+A
Sbjct: 131 ITPNKLWKPDILMYNSA 147
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 25.4 bits (53), Expect = 0.70
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAA 396
+ RLW+PDV++ N+A
Sbjct: 100 IPPHRLWKPDVLMYNSA 116
Score = 23.8 bits (49), Expect = 2.1
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Frame = +3
Query: 78 RFLLTCAIASAAE--CENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-N 236
R+ L AIA AA + +++ LL TY+ P +V++ L L +
Sbjct: 3 RWTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIID 62
Query: 237 IRESESTVRIQADLQMNWIDKRLXWNAGXVG 329
+ E + L++ W D + WN G
Sbjct: 63 VDEKNQLLITNLWLKLEWNDVNMRWNVSDYG 93
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 431 RVSNNGSVSCIXRLDIXTPXSMQXDNWPNDMQTC 532
R+ ++GS++ RL I M +P D Q C
Sbjct: 119 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 431 RVSNNGSVSCIXRLDIXTPXSMQXDNWPNDMQTC 532
R+ ++GS++ RL I M +P D Q C
Sbjct: 119 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 431 RVSNNGSVSCIXRLDIXTPXSMQXDNWPNDMQTC 532
R+ ++GS++ RL I M +P D Q C
Sbjct: 58 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 24.2 bits (50), Expect = 1.6
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1
Query: 355 ERLWRPDVVLLNAA 396
+++W+PD+VL N A
Sbjct: 106 DKVWKPDIVLFNNA 119
Score = 23.4 bits (48), Expect = 2.8
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 195 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLXWNAGXVG 329
K+ VN L ++ N+ E ++ L+ W D +L W+ G
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 346 VSSERLWRPDVVLLNAA 396
V R+WRPD +L N A
Sbjct: 82 VPYNRVWRPDTILYNNA 98
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 4.9
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +2
Query: 431 RVSNNGSVSCIXRLDIXTPXSMQXDNWPNDMQTC 532
R+ NGSV R+ + M +P D Q C
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVC 174
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 392 RLQPPPGTALSAARVSNNGSVSCIXRL 472
+++ PPGT + N + CI R+
Sbjct: 462 KIRVPPGTPIYECNKRCNCDIDCINRV 488
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 140 GQ*CCVFAFCRTSYSTSEEKPVTR 69
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,763
Number of Sequences: 438
Number of extensions: 3988
Number of successful extensions: 48
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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