Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP18_FL5_B10
(877 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 65 9e-13
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 63 3e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 63 3e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 59 5e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 58 8e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 58 1e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 58 1e-10
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 56 4e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 53 3e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 53 4e-09
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 53 4e-09
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 9e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 51 2e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 51 2e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 6e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 49 6e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 48 1e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 47 3e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 45 8e-07
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 39 7e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 38 1e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 38 1e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 38 1e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 37 3e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 37 3e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 35 0.001
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 33 0.003
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.011
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 28 0.13
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.30
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.9
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 64.9 bits (151), Expect = 9e-13
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 8/160 (5%)
Frame = +3
Query: 174 PPPDSKIVVNLTLHL--RHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVS 344
P +I N+T+ L + + S + + + + + W D LSW ++ G + V
Sbjct: 61 PISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVK 120
Query: 345 SERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSCIKRLDISTPISMXLDNWPNDM 515
S+ +W PD+ + N+ T G V ++GSVSC+ + + +WP D
Sbjct: 121 SDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDT 180
Query: 516 QTCTFKXGSXMHXSDEMDFVIDQKXXXV--CSSQGAWDVK 629
C GS +H +E++ +D+K + ++ WD K
Sbjct: 181 HRCRINFGSWVHSGEEVNIFLDKKGFHMDGYTNNSKWDFK 220
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 63.3 bits (147), Expect = 3e-12
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 4/167 (2%)
Frame = +3
Query: 99 CGRMRKR--NITVPHDRLAPRNVRSGLPPPDSKIVVNLTLHLRHANIRESESTVRIQADL 272
CGR KR N + R V + P + K + L + ++ E + A L
Sbjct: 51 CGRHEKRLLNELLSSYNTLERPVANESEPLEVKFGITLQQII---DVDEKNQILTTNAWL 107
Query: 273 QMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 446
++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 108 KLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSC 167
Query: 447 SCIKRLDISTPISMXLDNWPNDMQTCTFKXGSXMHXSDEMDFVIDQK 587
+ + + + +P D Q C K GS + +++D V+ +
Sbjct: 168 LYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLSSE 214
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 63.3 bits (147), Expect = 3e-12
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 4/167 (2%)
Frame = +3
Query: 99 CGRMRKR--NITVPHDRLAPRNVRSGLPPPDSKIVVNLTLHLRHANIRESESTVRIQADL 272
CGR KR N + R V + P + K + L + ++ E + A L
Sbjct: 51 CGRHEKRLLNELLSSYNTLERPVANESEPLEVKFGITLQQII---DVDEKNQILTTNAWL 107
Query: 273 QMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 446
++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 108 KLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSC 167
Query: 447 SCIKRLDISTPISMXLDNWPNDMQTCTFKXGSXMHXSDEMDFVIDQK 587
+ + + + +P D Q C K GS + +++D V+ +
Sbjct: 168 LYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLSSE 214
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Frame = +3
Query: 228 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNNGSVSCIKRLDISTPISMXLDNWPNDMQTCTFKXGSXMHXSDEMDFVID 581
G Y V++NGS + + + + +P D Q C K GS + +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 582 QK 587
+
Sbjct: 145 SE 146
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 59.7 bits (138), Expect = 3e-11
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Frame = +3
Query: 228 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNNGSVSCIKRLDISTPISMXLDNWPNDMQTCTFKXGSXMHXSDEMDFVID 581
G Y V+++GS + + M + +P D Q C K GS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 582 QK 587
+
Sbjct: 145 SE 146
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 59.3 bits (137), Expect = 5e-11
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Frame = +3
Query: 228 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNNGSVSCIKRLDISTPISMXLDNWPNDMQTCTFKXGSXMHXSDEMDFVID 581
G Y V+++GS + + M + +P D Q C K GS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 582 QK 587
+
Sbjct: 145 SE 146
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 58.4 bits (135), Expect = 8e-11
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Frame = +3
Query: 228 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNNGSVSCIKRLDISTPISMXLDNWPNDMQTCTFKXGSXMHXSDEMDFVID 581
G Y V+++GS + + + + +P D Q C K GS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 582 QK 587
+
Sbjct: 145 SE 146
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 58.0 bits (134), Expect = 1e-10
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Frame = +3
Query: 228 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNNGSVSCIKRLDISTPISMXLDNWPNDMQTCTFKXGSXMHXSDEMDFVID 581
G Y V+++GS + + + + +P D Q C K GS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 582 QK 587
+
Sbjct: 145 SE 146
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 58.0 bits (134), Expect = 1e-10
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Frame = +3
Query: 228 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 401
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 402 GDYALRARVSNNGSVSCIKRLDISTPISMXLDNWPNDMQTCTFKXGSXMHXSDEMDFVID 581
G Y V+++GS + + + + +P D Q C K GS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 582 QK 587
+
Sbjct: 145 SE 146
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 57.6 bits (133), Expect = 1e-10
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Frame = +3
Query: 189 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 362
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 363 PDVVLLNAAATTAGDYALRAR----VSNNGSVSCIKRLDISTPISMXLDNWPNDMQTCTF 530
PD+VL N A G+Y +R + + NG V + + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 531 KXGSXMHXSDEMDFVIDQKXXXVCSS----QGAWDV 626
K GS D++ + V S G WD+
Sbjct: 168 KFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 57.6 bits (133), Expect = 1e-10
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 443
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 444 VSCIKRLDISTPISMXLDNWPNDMQTCTFKXGSXMHXSDEMDFVI-DQKXXXVCS--SQG 614
+ + + + +P D Q C K GS + ++D + D+ + S + G
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNG 195
Query: 615 AWDVKG 632
WD+ G
Sbjct: 196 EWDLLG 201
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 56.0 bits (129), Expect = 4e-10
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
Frame = +3
Query: 162 RSGLPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWL 338
R +P + ++ L ++H N+ E TV L++ W L+W + E+ ++
Sbjct: 50 RDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIR 109
Query: 339 VSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSVSCIKRLDISTPISMXLDNWPND 512
V S +W PD+V+ + + ++ V N+G++ C+ + WP D
Sbjct: 110 VKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYD 169
Query: 513 MQTCTFKXGSXMHXSDEM 566
+ CT S H S+E+
Sbjct: 170 ILNCTIHIASWSHGSNEI 187
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 53.2 bits (122), Expect = 3e-09
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 443
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 444 VSCIKRLDISTPISMXLDNWPNDMQTCTFKXGSXMHXSDEMD 569
V + + ++ +P D QTC K GS + ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 52.8 bits (121), Expect = 4e-09
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Frame = +3
Query: 189 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 362
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 363 PDVVLLNAAATTAGDYAL----RARVSNNGSVSCIKRLDISTPISMXLDNWPNDMQTCTF 530
PD+VL N A G+Y + +A V +G V + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 531 KXGSXMHXSDEMD 569
K GS + ++D
Sbjct: 170 KLGSWTYDGFKVD 182
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 52.8 bits (121), Expect = 4e-09
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Frame = +3
Query: 189 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 362
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 363 PDVVLL-NAAATTAGDYALRARVSNNGSVSCIKRLDISTPISMXLDNWPNDMQTCTFKXG 539
PD+VL NA A +A + + G V + + ++ +P D QTC K G
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 540 SXMHXSDEMD 569
S + ++D
Sbjct: 173 SWTYDGFKVD 182
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 51.6 bits (118), Expect = 9e-09
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 5/131 (3%)
Frame = +3
Query: 192 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 359
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 360 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSCIKRLDISTPISMXLDNWPNDMQTCTFKX 536
PD+VL N A G + +A + G V + + + +P D QTC K
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 537 GSXMHXSDEMD 569
GS + ++D
Sbjct: 164 GSWTYDGIQID 174
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 50.8 bits (116), Expect = 2e-08
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
Frame = +3
Query: 156 NVRSGLPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 335
+VR P + + V++ + I E + T + + +W+D+RL++ G+ +
Sbjct: 20 SVRPDFGGPPATVEVDIMVRSM-GPISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALS 78
Query: 336 LVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSCIKRLDISTPISMXLDNWP 506
+ R+W+PD N + T R+ +G V RL I M L+N+P
Sbjct: 79 ISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFP 138
Query: 507 NDMQTCTFKXGS 542
D Q C + GS
Sbjct: 139 MDTQRCPLQFGS 150
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 50.8 bits (116), Expect = 2e-08
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 434
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKY 142
Query: 435 NGSVSCIKRLDISTPISMXLDNWPNDMQTCTFKXGSXMHXSDEMD 569
G VS + + ++ +P D Q+C K GS + ++D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.8 bits (111), Expect = 6e-08
Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 6/148 (4%)
Frame = +3
Query: 117 RNITVPHDRLAPRNVRSGLPP--PDSKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWI 287
RNIT+ + L + LP + VV + +R + E + + + +W
Sbjct: 35 RNITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWR 94
Query: 288 DKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSCIK 458
D RLS+ S + ER+WRPD N + + R+S +G +
Sbjct: 95 DSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSM 154
Query: 459 RLDISTPISMXLDNWPNDMQTCTFKXGS 542
RL I M L N+P D Q+C GS
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSCPLILGS 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 48.8 bits (111), Expect = 6e-08
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 3/129 (2%)
Frame = +3
Query: 192 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 368
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 369 VVLLNAAATTAGDYALRAR--VSNNGSVSCIKRLDISTPISMXLDNWPNDMQTCTFKXGS 542
+L N A + VS+ G V + + + ++ +P D Q C K S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 543 XMHXSDEMD 569
+ +++
Sbjct: 152 WTYDGYQLE 160
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 48.0 bits (109), Expect = 1e-07
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 6/143 (4%)
Frame = +3
Query: 165 SGLPPPDSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTW 335
SG D +V + L +R A I + + +Q + W+D+RL +N G T
Sbjct: 50 SGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT- 108
Query: 336 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSCIKRLDISTPISMXLDNWP 506
L + R+W PD+ N + + R+ NGSV R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 507 NDMQTCTFKXGSXMHXSDEMDFV 575
D Q C+ + S +D++ F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 46.8 bits (106), Expect = 3e-07
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Frame = +3
Query: 270 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 434
++ W D +L WN ++G T V SE +W PD+VL N A G+Y + +A + +
Sbjct: 73 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHH 129
Query: 435 NGSVSCIKRLDISTPISMXLDNWPNDMQTCTFKXGSXMHXSDEMD 569
G V + + ++ +P D QTC K GS + +D
Sbjct: 130 TGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 45.2 bits (102), Expect = 8e-07
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 6/143 (4%)
Frame = +3
Query: 165 SGLPPPDSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTW 335
SG D VV + + +R + I + +Q + W+D+RL +N G T
Sbjct: 50 SGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT- 108
Query: 336 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSCIKRLDISTPISMXLDNWP 506
L + R+W PD+ N + + R+ NGSV R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 507 NDMQTCTFKXGSXMHXSDEMDFV 575
D Q C+ + S +D++ F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 38.7 bits (86), Expect = 7e-05
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 231 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 410
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 411 ALR---ARVSNNGSVSCIKRLDISTPISMXLDNWPNDMQTCTFKXGS 542
R R+S +GSV+ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 37.9 bits (84), Expect = 1e-04
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 4/148 (2%)
Frame = +3
Query: 144 LAPRNVRSGLPPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGE 317
L+ R + LPP + VN++ L L A+ ES ++ LQ W D RL + N +
Sbjct: 70 LSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 318 WGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSCIKRLDISTPISMX 491
+ + + +W PD ++ R+ NG+V+ + R +
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 492 LDNWPNDMQTCTFKXGSXMHXSDEMDFV 575
L+ +P D C+F S + + +V
Sbjct: 190 LNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 37.9 bits (84), Expect = 1e-04
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 4/148 (2%)
Frame = +3
Query: 144 LAPRNVRSGLPPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGE 317
L+ R + LPP + VN++ L L A+ ES ++ LQ W D RL + N +
Sbjct: 70 LSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 318 WGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSCIKRLDISTPISMX 491
+ + + +W PD ++ R+ NG+V+ + R +
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 492 LDNWPNDMQTCTFKXGSXMHXSDEMDFV 575
L+ +P D C+F S + + +V
Sbjct: 190 LNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 37.9 bits (84), Expect = 1e-04
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 4/148 (2%)
Frame = +3
Query: 144 LAPRNVRSGLPPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGE 317
L+ R + LPP + VN++ L L A+ ES ++ LQ W D RL + N +
Sbjct: 70 LSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 318 WGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSCIKRLDISTPISMX 491
+ + + +W PD ++ R+ NG+V+ + R +
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 492 LDNWPNDMQTCTFKXGSXMHXSDEMDFV 575
L+ +P D C+F S + + +V
Sbjct: 190 LNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
Frame = +3
Query: 192 IVVNLTLH-LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSE---RLW 359
+ V +T++ L +++ E + + + W D RL++ G T V SE +W
Sbjct: 36 VEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAFKK-RTGVETLSVGSEFIKNIW 94
Query: 360 RPDVVLLNAA------ATTAGDYALRARVSNNGSVSCIKRLDISTPISMXLDNWPNDMQT 521
PD +N ATT+ ++ R+ ++GS++ RL I+ M L +P D Q
Sbjct: 95 VPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPMDRQL 151
Query: 522 C 524
C
Sbjct: 152 C 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 36.7 bits (81), Expect = 3e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +3
Query: 282 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 434
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 435 NGSVSCIKRLDISTPISMXLDNWPNDMQTC 524
+GS++ RL I+ M L +P D Q C
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 36.7 bits (81), Expect = 3e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +3
Query: 282 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 434
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 435 NGSVSCIKRLDISTPISMXLDNWPNDMQTC 524
+GS++ RL I+ M L +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 34.7 bits (76), Expect = 0.001
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
Frame = +3
Query: 228 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 401
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 402 GDYALRAR---VSNNGSVSCIKRLDISTPISMXLDNWPNDMQTCTFKXGSXMHXSDEMDF 572
+ ++ + ++ ++ + +L + +M +++P+D Q C+ S H + ++ F
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162
Query: 573 V 575
+
Sbjct: 163 I 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 33.5 bits (73), Expect = 0.003
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +3
Query: 348 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSCIKRLDISTPISMXLDNWPNDMQ 518
+ +WRPD NA + T + + + ++ + +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 519 TCTFKXGSXMHXSDEMDFVID 581
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 31.5 bits (68), Expect = 0.011
Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 4/132 (3%)
Frame = +3
Query: 192 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 365
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 366 DV--VLLNAAATTAGDYALRARVSNNGSVSCIKRLDISTPISMXLDNWPNDMQTCTFKXG 539
D ++ R+ NG+V+ + R + L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 540 SXMHXSDEMDFV 575
S + + +V
Sbjct: 257 SISYEQTAITYV 268
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 27.9 bits (59), Expect = 0.13
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +3
Query: 354 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSCIKRLDISTPISMXLDNWPNDMQTC 524
+W P V + N ++A T + + + +G V RL + + L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 525 TFKXGSXMHXSDEMDFVIDQK 587
S H +M DQ+
Sbjct: 157 PLIFESWTHNVLDMVLYWDQE 177
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.6 bits (56), Expect = 0.30
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 11/122 (9%)
Frame = +3
Query: 192 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 353
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 354 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSCIKRLDISTPISMXLDNWPNDMQ 518
LW+PD LNA + AL + S+ N +V R+ M +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 519 TC 524
C
Sbjct: 129 IC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 335 PSAAAPLPCVPTQS 294
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,537
Number of Sequences: 438
Number of extensions: 4599
Number of successful extensions: 79
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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