Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP18_FL5_B06
         (902 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF458626-1|ABO26063.1|  560|Drosophila melanogaster nicotinic ac...    30   3.8  
AY036614-1|AAK67257.1|  219|Drosophila melanogaster nicotinic ac...    30   3.8  
AJ554210-1|CAD86936.1|  542|Drosophila melanogaster nicotinic ac...    30   3.8  
AE014298-2837|AAS65410.1|  219|Drosophila melanogaster CG32538-P...    30   3.8  
AE014298-2836|AAS65409.1|  560|Drosophila melanogaster CG32538-P...    30   3.8  
AE014298-2835|AAF48950.3|  541|Drosophila melanogaster CG32538-P...    30   3.8  

>EF458626-1|ABO26063.1|  560|Drosophila melanogaster nicotinic
           acetylcholine receptorDalpha7 protein.
          Length = 560

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 317 VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNXS 421
           +   RLW+PDV++ N+A     G YA    V NN S
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172


>AY036614-1|AAK67257.1|  219|Drosophila melanogaster nicotinic
           acetylcholine receptorDalpha7 subunit protein.
          Length = 219

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 317 VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNXS 421
           +   RLW+PDV++ N+A     G YA    V NN S
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172


>AJ554210-1|CAD86936.1|  542|Drosophila melanogaster nicotinic
           acetylcholine receptorsubunit Dalpha7 protein.
          Length = 542

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 317 VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNXS 421
           +   RLW+PDV++ N+A     G YA    V NN S
Sbjct: 115 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 150


>AE014298-2837|AAS65410.1|  219|Drosophila melanogaster CG32538-PC,
           isoform C protein.
          Length = 219

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 317 VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNXS 421
           +   RLW+PDV++ N+A     G YA    V NN S
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172


>AE014298-2836|AAS65409.1|  560|Drosophila melanogaster CG32538-PA,
           isoform A protein.
          Length = 560

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 317 VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNXS 421
           +   RLW+PDV++ N+A     G YA    V NN S
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172


>AE014298-2835|AAF48950.3|  541|Drosophila melanogaster CG32538-PB,
           isoform B protein.
          Length = 541

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 317 VXSERLWRPDVVLLNAA-ATTAGDYALRARVSNNXS 421
           +   RLW+PDV++ N+A     G YA    V NN S
Sbjct: 118 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 153


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,241,236
Number of Sequences: 53049
Number of extensions: 434169
Number of successful extensions: 702
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)